PangenomeTIGR4

serotype 4

D39

serotype 2

D39V

serotype 2

Hungary19A-6

serotype 19A

EF3030

serotype 19F

670-6B

serotype 6B

6A-10

serotype 6A

70585

serotype 5

A026

serotype 19F

A66

serotype 3

AP200

serotype 11A

ASP0581

serotype 12F

ATCC 49619

serotype 19F

ATCC 700669

serotype 23F

BM6001

serotype 19F

BVJ1JL

serotype 1

CGSP14

serotype 14

G54

serotype 19F

HU-OH

serotype 3

Hu15

serotype 19A

Hu17

serotype 19A

INV104

serotype 1

INV200

serotype 14

JJA

serotype 14

MDRSPN001

serotype 19F

NCTC7465

serotype 1

NCTC7466

serotype 2

NU83127

serotype 4

OXC141

serotype 3

P1031

serotype 1

R6

serotype 2

SP49

serotype 19A

SPN032672

serotype 1

SPN034156

serotype 3

SPN034183

serotype 3

SPN994038

serotype 3

SPN994039

serotype 3

SPNA45

serotype 3

ST556

serotype 19F

TCH8431/19A

serotype 19A

Taiwan19F-14

serotype 19F

Xen35

serotype 4

gamPNI0373

serotype 1

⊟Summary

• pan ID^?: PNEUPAN001512000
• symbol^?: uvrC
• synonym:
• description^?: excinuclease ABC subunit UvrC

  descriptions from strain specific annotations:

  • excinuclease ABC subunit UvrC
  • excinuclease ABC, C subunit
  • UvrABC DNA repair system protein C
  • excinuclease ABC subunit C
  • UvrABC system protein C
  • excinuclease, subunit C
  • excinuclease%2C subunit C
  • excinuclease ABC, subunit C
  • Exonuclease ABC - subunit C
  • Nuclease subunit of the excinuclease complex
• strand^?: +
• coordinates^?: 1932698..1934545
• occurrence^?: in 100% of 43 strains

⊟Orthologs

(4)^?
TIGR4:
SP_RS03035 (uvrC)
(2)
D39:
SPD_RS02885 (uvrC)
(2)
D39V:
SPV_RS02880 (uvrC)
(19A)
Hungary19A-6:
SPH_RS03460 (uvrC)
(19F)
EF3030:
EF3030_RS02910 (uvrC)
(6B)^?
670-6B:
SP670_RS03380 (uvrC)
(6A)
6A-10:
HKM25_RS02955 (uvrC)
(5)
70585:
SP70585_RS03340 (uvrC)
(19F)
A026:
T308_RS02955 (uvrC)
(3)
A66:
A66_RS02805 (uvrC)
(11A)
AP200:
SPAP_RS03000 (uvrC)
(12F)
ASP0581:
EL334_RS03115 (uvrC)
(19F)
ATCC 49619:
EL263_RS03055 (uvrC)
(23F)
ATCC 700669:
SPN23F_RS02850 (uvrC)
(19F)
BM6001:
ODS73_RS03345 (uvrC)
(1)
BVJ1JL:
JN057_RS03045 (uvrC)
(14)
CGSP14:
SPCG_RS03045 (uvrC)
(19F)
G54:
SPG_RS02835 (uvrC)
(1)
gamPNI0373:
HMPREF1038_RS03160 (uvrC)
(3)
HU-OH:
EL271_RS02840 (uvrC)
(19A)
Hu15:
SPNHU15_RS03140 (uvrC)
(19A)
Hu17:
SPNHU17_RS03070 (uvrC)
(1)
INV104:
INV104_RS03025 (uvrC)
(14)
INV200:
SPNINV200_RS02915 (uvrC)
(14)
JJA:
SPJ_RS02855 (uvrC)
(19F)
MDRSPN001:
MDRSPN_RS07510 (uvrC)
(1)
NCTC7465:
AT689_RS10650 (uvrC)
(2)
NCTC7466:
DQM66_RS02885 (uvrC)
(4)
NU83127:
EL277_RS03105 (uvrC)
(3)
OXC141:
SPNOXC_RS03035 (uvrC)
(1)
P1031:
SPP_RS03115 (uvrC)
(2)
R6:
SPR_RS02745 (uvrC)
(19A)
SP49:
BMJ42_RS03600 (uvrC)
(1)
SPN032672:
SPN032672_RS09295 (uvrC)
(3)
SPN034156:
SPN034156_RS08960 (uvrC)
(3)
SPN034183:
SPN034183_RS03050 (uvrC)
(3)
SPN994038:
SPN994038_RS02970 (uvrC)
(3)
SPN994039:
SPN994039_RS02970 (uvrC)
(3)
SPNA45:
SPNA45_RS08345 (uvrC)
(19F)
ST556:
MYY_RS03425 (uvrC)
(19F)
Taiwan19F-14:
SPT_RS03205 (uvrC)
(19A)
TCH8431/19A:
HMPREF0837_RS04380 (uvrC)
(4)
Xen35:
CXP32_RS03095 (uvrC)

⊟Genome Viewer

TIGR4
D39
D39V
Hungary19A-6
EF3030

⊟Alignments

• alignment of orthologues:
  CLUSTAL format alignment by MAFFT L-INS-i (v7.505)
  
  
  TIGR4           MNNLIKSKLELLPTSPGCYIHKDKNGTIIYVGKAKNLRNRVRSYFRGSHDTKTEALVSEI
  D39             MNNLIKSKLELLPTSPGCYIHKDKNGTIIYVGKAKNLRNRVRSYFRGSHDTKTEALVSEI
  D39V            MNNLIKSKLELLPTSPGCYIHKDKNGTIIYVGKAKNLRNRVRSYFRGSHDTKTEALVSEI
  Hungary19A-6    MNNLIKSKLELLPTSPGCYIHKDKNGTIIYVGKAKNLRNRVRSYFRGSHDTKTEALVSEI
  EF3030          MNNLIKSKLELLPTSPGCYIHKDKNGTIIYVGKAKNLRNRVRSYFRGSHDTKTEALVSEI
                  ************************************************************
  
  TIGR4           VDFEFIVTESNIEALLLEINLIKENKPKYNIMLKDDKSYPFIKITNERYPRLIITRQVKK
  D39             VDFEFIVTESNIEALLLEINLIKENKPKYNIMLKDDKSYPFIKITNERYPRLIITRQVKK
  D39V            VDFEFIVTESNIEALLLEINLIKENKPKYNIMLKDDKSYPFIKITNERYPRLIITRQVKK
  Hungary19A-6    VDFEFIVTESNIEALLLEINLIKENKPKYNIMLKDDKSYPFIKITNERYPRLIITRQVKK
  EF3030          VDFEFIVTESNIEALLLEINLIKENKPKYNIMLKDDKSYPFIKITNERYPRLIITRQVKK
                  ************************************************************
  
  TIGR4           DGGLYFGPYPDVGAANEIKRLLDRIFPFRKCTNPPSKVCFYYHIGQCMAHTICKKDEAYF
  D39             DGSLYFGPYPDVGAANEIKRLLDRIFPFRKCTNPPSKVCFYYHIGQCMAHTICKKDEAYF
  D39V            DGSLYFGPYPDVGAANEIKRLLDRIFPFRKCTNPPSKVCFYYHIGQCMAHTICKKDEAYF
  Hungary19A-6    DGGLYFGPYPDVGAANEIKRLLDRIFPFRKCTNPPSKVCFYYHIGQCMAHTICKKDEAYF
  EF3030          DGGLYFGPYPDVGAANEIKRLLDRIFPFRKCTNPPSKVCFYYHIGQCMAHTICKKDETYF
                  **.******************************************************:**
  
  TIGR4           KSMAQEVSDFLKGQDDKIIDDLKSKMAVAAQSMEFERAAEYRDLIQAIGTLRTKQRVMAK
  D39             KSMAQEVSDFLKGQDDKIIDDLKSKMAVAAQSMEFERAAEYRDLIQAIGTLRTKQRVMAK
  D39V            KSMAQEVSDFLKGQDDKIIDDLKSKMAVAAQSMEFERAAEYRDLIQAIGTLRTKQRVMAK
  Hungary19A-6    KSMAQEVSDFLKGQDNKIIDELKGKMAAAAQTMEFERAAEYRDLIQAIGTLRTKQRVMAK
  EF3030          KSMAQEVSDFLKGQDNKIIDELKGKMAAAAQTMEFERAAEYRDLIQAIGTLRTKQRVMAK
                  ***************:****:**.***.***:****************************
  
  TIGR4           DLQNRDVFGYYVDKGWMCVQVFFVRQGKLIERDVNLFPYFNDPDEDFLTYVGQFYQEKSH
  D39             DLQNRDVFGYYVDKGWMCVQVFFVRQGKLIERDVNLFPYFNDPDEDFLTYVGQFYQEKSH
  D39V            DLQNRDVFGYYVDKGWMCVQVFFVRQGKLIERDVNLFPYFNDPDEDFLTYVGQFYQEKSH
  Hungary19A-6    DLQNRDVFGYYVDKGWMCVQVFFVRQGKLIERDVNLFPYFNDPDEDFLTYVGQFYQEKSH
  EF3030          DLQNRDVFGYYVDKGWMCVQVFFVRQGKLIERDVNLFPYFNDPDEDFLTYVGQFYQEKSH
                  ************************************************************
  
  TIGR4           LVPNEVLIPQDIDEEAVKALVDSKILKPQRGEKKQLVNLAIKNARVSLEQKFNLLEKSVE
  D39             LVPNEVLIPQDIDEEAVKALVDSKILKPQRGEKKQLVNLAIKNARVSLEQKFNLLEKSVE
  D39V            LVPNEVLIPQDIDEEAVKALVDSKILKPQRGEKKQLVNLAIKNARVSLEQKFNLLEKSVE
  Hungary19A-6    LVPNEVLIPQDIDEEAVKALVDSKILKPQRGEKKQLVNLAIKNARVSLEQKFNLLEKSVE
  EF3030          LVPNEVLIPQDIDEEAVKALVDTKILKPQRGEKKQLVNLAIKNARVSLEQKFNLLEKSVE
                  **********************:*************************************
  
  TIGR4           KTQGAIENLGRLLQIPTPVRIESFDNSNIMGTSPVSAMVVFVNGKPSKKDYRKYKIKTVV
  D39             KTQGAIENLGRLLQIPTPVRIESFDNSNIMGTSPVSAMVVFVNGKPSKKDYRKYKIKTVV
  D39V            KTQGAIENLGRLLQIPTPVRIESFDNSNIMGTSPVSAMVVFVNGKPSKKDYRKYKIKTVV
  Hungary19A-6    KTQGAIENLGRLLQIPTPVRIESFDNSNIMGTSPVSAMVVFVNGKPSKKDYRKYKIKTVV
  EF3030          KTQGAIENLGRLLQIPTPVRIESFDNSNIMGTSPVSAMVVFVNGKPSKKDYRKYKIKTVV
                  ************************************************************
  
  TIGR4           GPDDYASMREVIRRRYGRVQREALTPPDLIVIDGGQGQVNIAKQVIQEELGLDIPIAGLQ
  D39             GPDDYASMREVIRRRYGRVQREALTPPDLIVIDGGQGQVNIAKQVIQEELGLDIPIAGLQ
  D39V            GPDDYASMREVIRRRYGRVQREALTPPDLIVIDGGQGQVNIAKQVIQEELGLDIPIAGLQ
  Hungary19A-6    GPDDYASMREVIRRRYGRVQREALTPPDLIVIDGGQGQVHIAKQVIQEELGLDIPIAGLQ
  EF3030          GPDDYASMREVIRRRYGRVQREALTPPDLIVIDGGQGQVNIAKQVIQEELGLDIPIAGLQ
                  ***************************************:********************
  
  TIGR4           KNDKHQTHELLFGDPLEVVDLSRNSQEFFLLQRIQDEVHRFAITFHRQLRSKNSFSSQLD
  D39             KNDKHQTHELLFGDPLEVVDLSRNSQEFFLLQRIQDEVHRFAITFHRQLRSKNSFSSQLD
  D39V            KNDKHQTHELLFGDPLEVVDLSRNSQEFFLLQRIQDEVHRFAITFHRQLRSKNSFSSQLD
  Hungary19A-6    KNDKHQTHELLFGDPLEVVELSRNSQEFFLLQRIQDEVHRFAITFHRQLRSKNSFSSQLD
  EF3030          KNDKHQTHELLFGDPLEVVDLSRNSQEFFLLQRIQDEVHRFAITFHRQLRSKNSFSSQLD
                  *******************:****************************************
  
  TIGR4           GIDGLGPKRKQNLMKHFKSLTKIKEASVDEIVEVGVPRVVAEAVQRKLNPQ-GEALPQVA
  D39             GIDGLGPKRKQNLMRHFKSLTKIKEASVDEIVEVGVPRVVAEAVQRKLNPQ-GEALSQVA
  D39V            GIDGLGPKRKQNLMRHFKSLTKIKEASVDEIVEVGVPRVVAEAVQRKLNPQ-GEALSQVA
  Hungary19A-6    GIEGLGPKRKQNLMKHFKSLTKIKEASVDDIVEVGVPRAVAEAVQRKLNPQEAEALLQVA
  EF3030          GIDGLGPKRKQNLMKHFKSLTKIKEASVDEIVEVGVPRVVAEAVQRKLNPQ-GEALPQVA
                  **:***********:**************:********.************ .*** ***
  
  TIGR4           EERVDYQTEGNHNEP
  D39             EERVDYQTEGNHNEP
  D39V            EERVDYQTEGNHNEP
  Hungary19A-6    EERVDYQTEGNHNEP
  EF3030          EERVDYQTEGNHNEP
                  ***************