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PangenomeTIGR4
serotype 4
D39serotype 2
D39Vserotype 2
Hungary19A-6serotype 19A
EF3030serotype 19F
670-6Bserotype 6B
6A-10serotype 6A
70585serotype 5
A026serotype 19F
A66serotype 3
AP200serotype 11A
ASP0581serotype 12F
ATCC 49619serotype 19F
ATCC 700669serotype 23F
BM6001serotype 19F
BVJ1JLserotype 1
CGSP14serotype 14
G54serotype 19F
HU-OHserotype 3
Hu15serotype 19A
Hu17serotype 19A
INV104serotype 1
INV200serotype 14
JJAserotype 14
MDRSPN001serotype 19F
NCTC7465serotype 1
NCTC7466serotype 2
NU83127serotype 4
OXC141serotype 3
P1031serotype 1
R6serotype 2
SP49serotype 19A
SPN032672serotype 1
SPN034156serotype 3
SPN034183serotype 3
SPN994038serotype 3
SPN994039serotype 3
SPNA45serotype 3
ST556serotype 19F
TCH8431/19Aserotype 19A
Taiwan19F-14serotype 19F
Xen35serotype 4
gamPNI0373serotype 1
⊟Summary[edit | edit source]
- pan ID?: PNEUPAN001523000
- symbol?: dacB
- synonym: ldcB
- description?: LD-carboxypeptidase LdcB/DacB
- LD-carboxypeptidase LdcB/DacB
- D-alanyl-D-alanine carboxypeptidase
- putative carboxypeptidase
- Putative carboxypeptidase YodJ
- carboxypeptidase
- conserved hypothetical protein
- D-Ala D-Ala carboxypeptidase
- D-alanyl-D-alanine carboxypeptidase family protein
- D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4)
- D-alanyl-D-alanine carboxypeptidase, putative
- L,D-carboxypeptidase
- lipoprotein, putative
- M15 family metallopeptidase
- putative lipoprotein
- serine-type D-Ala-D-Ala carboxypeptidase
descriptions from strain specific annotations:
- strand?: +
- coordinates?: 1943734..1944454
- occurrence?: in 100% of 43 strains
⊟Orthologs[edit | edit source]
(12F)
ASP0581:
EL334_RS03170 (ldcB)
(19F)
ATCC 49619:
EL263_RS03120 (ldcB)
(23F)
ATCC 700669:
SPN23F_RS02905 (ldcB)
(14)
INV200:
SPNINV200_RS02965 (ldcB)
(14)
JJA:
SPJ_RS02905 (ldcB)
(19F)
MDRSPN001:
MDRSPN_RS07455 (ldcB)
(19A)
SP49:
BMJ42_RS03665 (ldcB)
(1)
SPN032672:
SPN032672_RS09345 (ldcB)
(3)
SPN034156:
SPN034156_RS09020 (ldcB)
(3)
SPN034183:
SPN034183_RS03110 (ldcB)
(3)
SPN994038:
SPN994038_RS03030 (ldcB)
(3)
SPN994039:
SPN994039_RS03030 (ldcB)
⊟Genome Viewer[edit | edit source]
| TIGR4 | |
| D39 | |
| D39V | |
| Hungary19A-6 | |
| EF3030 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.505)
TIGR4 MKKRYLVLTALLALSLAACSQEKTKNEDGETKTEQTAKADGTVGSKSQGAAQKKAEVVNK
D39 MKKRYLVLTALLALSLAACSQEKTKNEDGETKTEQTAKADGTVGSKSQGAAQKKAEVVNK
D39V MKKRYLVLTALLALSLAACSQEKTKNEDGETKTEQTAKADGTVGSKSQGAAQKKAEVVNK
Hungary19A-6 MKKRYIVLSGLLAVILAACSQEKPKNEENTQKTEQTSQPEGTVGSKSQASSQKKAEVVNK
EF3030 MKKRYLVLTALLALSLAACSQEKTKNEDGETKTEQTAKADGTVGSKSQGAAQKKAEVVNK
*****:**:.***: ********.***:. *****::.:********.::*********
TIGR4 GDYYSIQGKYDEIIVANKHYPLSKDYNPGENPTAKAELVKLIKAMQEAGFPISDHYSGFR
D39 GDYYSIQGKYDEIIVANKHYPLSKDYNPGENPTAKAELVKLIKAMQEAGFPISDHYSGFR
D39V GDYYSIQGKYDEIIVANKHYPLSKDYNPGENPTAKAELVKLIKAMQEAGFPISDHYSGFR
Hungary19A-6 GDYYSIQGKYDEIVIANKHYPLSKDYNPGENPTAKAELVKLIAAMQAAGYPISDHYSGFR
EF3030 GDYYSIQGKYDEIIVANKHYPLSKDYNPGENPTAKAELVKLIKAMQEAGFPISDHYSGFR
*************::*************************** *** **:**********
TIGR4 SYETQTKLYQDYVNQDGKAAADRYSARPGYSEHQTGLAFDVIGTDGDLVTEEKAAQWLLD
D39 SYETQTKLYQDYVNQDGKEAADRYSARPGYSEHQTGLAFDVIGTDGDLVTEEKAAQWLLD
D39V SYETQTKLYQDYVNQDGKEAADRYSARPGYSEHQTGLAFDVIGTDGDLVTEEKAAQWLLD
Hungary19A-6 SYETQTKLYQDYVNQDGKEAADRYSARPGYSEHQTGLAFDLIGTDGDLVTEEKAAQWLLD
EF3030 SYETQTKLYQDYVNQDGKAAADRYSARPGYSEHQTGLAFDVIGTDGDLVTEEKAAQWLLD
****************** *********************:*******************
TIGR4 HAADYGFVVRYLKGKEKETGYMAEEWHLRYVGKEAKEIAASGLSLEEYYGFEGGDYVD
D39 HAADYGFVVRYLKGKEKETGYMAEEWHLRYVGKEAKEIAESGLSLEEYYGFEGGDYVD
D39V HAADYGFVVRYLKGKEKETGYMAEEWHLRYVGKEAKEIAESGLSLEEYYGFEGGDYVD
Hungary19A-6 HAADYGFVVRYLKGKEKETGYMAEEWHLRYVGKEAKEIAASGLSLEEYYGFEGGDYVD
EF3030 HAADYGFVVRYLKGKEKETGYMAEEWHLRYVGKEAKEIAASGLSLEEYYGFEGGDYVD
*************************************** ******************