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PangenomeTIGR4
serotype 4
D39serotype 2
D39Vserotype 2
Hungary19A-6serotype 19A
EF3030serotype 19F
670-6Bserotype 6B
6A-10serotype 6A
70585serotype 5
A026serotype 19F
A66serotype 3
AP200serotype 11A
ASP0581serotype 12F
ATCC 49619serotype 19F
ATCC 700669serotype 23F
BVJ1JLserotype 1
CGSP14serotype 14
G54serotype 19F
HU-OHserotype 3
Hu15serotype 19A
Hu17serotype 19A
INV104serotype 1
INV200serotype 14
JJAserotype 14
MDRSPN001serotype 19F
NCTC7466serotype 2
NU83127serotype 4
OXC141serotype 3
P1031serotype 1
R6serotype 2
SP49serotype 19A
SPN032672serotype 1
SPN034156serotype 3
SPN034183serotype 3
SPN994038serotype 3
SPN994039serotype 3
SPNA45serotype 3
ST556serotype 19F
TCH8431/19Aserotype 19A
Taiwan19F-14serotype 19F
Xen35serotype 4
gamPNI0373serotype 1
⊟Summary[edit | edit source]
- pan ID?: PNEUPAN001581000
- symbol?: PTS-EII_11
- synonym:
- description?: PTS sugar transporter subunit IIA
- PTS sugar transporter subunit IIA
- putative sugar phosphotransferase system (PTS),IIA component
- Phosphotransferase system sugar-specific EII component
- PTS fructose transporter subunit IIA
- PTS system IIA component, putative
- PTS system transporter subunit IIA
- putative PTS system IIA component
- Galactose-specific PTS IIA component
- phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
- phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 family protein
- Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type)
- PTS system, galactose-specific IIA component
- PTS system, galactose-specific IIA component (EC 2.7.1.69)
- PTS system,IIA component
- pseudogene
descriptions from strain specific annotations:
- strand?: +
- coordinates?: 1926199..218666
- occurrence?: in 95% of 41 strains
⊟Orthologs[edit | edit source]
⊟Genome Viewer[edit | edit source]
| TIGR4 | |
| D39 | |
| D39V | |
| Hungary19A-6 | |
| EF3030 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.505)
TIGR4 MVLDYFFDKNLVFCLEADSQEQLFDQVATLLEEREIVTPTYREALITREKSFPTGLDMEF
D39 MVLDYFFDKNLVFCLEADNQEQLFDQVATLLEEREIVTPTYREALITREKSFPTGLDMEF
D39V MVLDYFFDKNLVFCLEADNQEQLFDQVATLLEEREIVTPTYREALITREKSFPTGLDMEF
Hungary19A-6 MVLDYFFDKNLVFCLEADNQEQLFDQVATLLEEREIVTPTYREALITREKSFPTGLDMEF
EF3030 MVLDYFFDKNLVFCLEADNQEQLFDQVATLLEEREIVTPTYREALITREKSFPTGLDMEF
******************.*****************************************
TIGR4 LGKDLPNVAIPHTDIVHNLAEKVVVVRLEKPITFHNMIAPDKEVEVSLLFFIINNSSSSQ
D39 LGKDLPNVAIPHTDIVHNLAEKVVVVRLEKPVTFHNMIAPDKEVEVSLLFFIINNSSSSQ
D39V LGKDLPNVAIPHTDIVHNLAEKVVVVRLEKPVTFHNMIAPDKEVEVSLLFFIINNSSSSQ
Hungary19A-6 LGKDLPNVAIPHTDIVHNLAEKVVVVRLEKPVTFHNMIAPDKEVEVSLLFFIINNSSSSQ
EF3030 LGKDLPNVAIPHTDIVHNLAEKVVVVRLEKPVTFHNMIAPDKEVEVSLLFFIINNSSSSQ
*******************************:****************************
TIGR4 TNILAQLMDFFTGNGHLEDLSKISEPEALYTYIAEATA
D39 TNILAQLMDFFTGNGHLEDLSKISEPEKLYAYIAEAIA
D39V TNILAQLMDFFTGNGHLEDLSKISEPEKLYAYIAEAIA
Hungary19A-6 TNILAQLMDFFTGNGHLEDLSKISEPEKLYAYIAEATA
EF3030 TNILAQLMDFFTGNGHLEDLSKISEPEKLYAYIAETTA
*************************** **:****: *