PangenomeTIGR4

serotype 4

D39

serotype 2

D39V

serotype 2

Hungary19A-6

serotype 19A

EF3030

serotype 19F

670-6B

serotype 6B

6A-10

serotype 6A

70585

serotype 5

A026

serotype 19F

A66

serotype 3

AP200

serotype 11A

ASP0581

serotype 12F

ATCC 49619

serotype 19F

ATCC 700669

serotype 23F

BM6001

serotype 19F

BVJ1JL

serotype 1

CGSP14

serotype 14

G54

serotype 19F

HU-OH

serotype 3

Hu15

serotype 19A

Hu17

serotype 19A

INV104

serotype 1

INV200

serotype 14

JJA

serotype 14

MDRSPN001

serotype 19F

NCTC7465

serotype 1

NCTC7466

serotype 2

NU83127

serotype 4

OXC141

serotype 3

P1031

serotype 1

R6

serotype 2

SP49

serotype 19A

SPN032672

serotype 1

SPN034156

serotype 3

SPN034183

serotype 3

SPN994038

serotype 3

SPN994039

serotype 3

SPNA45

serotype 3

ST556

serotype 19F

TCH8431/19A

serotype 19A

Taiwan19F-14

serotype 19F

Xen35

serotype 4

gamPNI0373

serotype 1

⊟Summary

• pan ID^?: PNEUPAN001601000
• symbol^?: sccB
• synonym:
• description^?: bacteriocin-associated integral membrane family protein

  descriptions from strain specific annotations:

  • bacteriocin-associated integral membrane family protein
  • bacteriocin-associated integral membrane protein
  • putative membrane protein
  • conserved hypothetical protein
  • (Putative) Streptococcin C Immunity protein
  • DUF1430 domain-containing protein
  • membrane protein, putative
  • pseudogene
• strand^?: +
• coordinates^?: 2035567..2039299
• occurrence^?: in 100% of 43 strains

⊟Orthologs

(4)^?
TIGR4:
SP_RS03360
(2)
D39:
SPD_RS03220
(2)
D39V:
SPV_RS03215
(19A)
Hungary19A-6:
SPH_RS03785
(19F)
EF3030:
EF3030_RS03225
(6B)^?
670-6B:
SP670_RS03710
(6A)
6A-10:
HKM25_RS03275
(5)
70585:
SP70585_RS03650
(19F)
A026:
T308_RS03265
(3)
A66:
A66_RS11630
(11A)
AP200:
SPAP_RS12630
(12F)
ASP0581:
EL334_RS03430
(19F)
ATCC 49619:
EL263_RS03380
(23F)
ATCC 700669:
SPN23F_RS03165
(19F)
BM6001:
ODS73_RS03655
(1)
BVJ1JL:
JN057_RS03380
(14)
CGSP14:
SPCG_RS03360
(19F)
G54:
SPG_RS03170
(1)
gamPNI0373:
HMPREF1038_RS03495
(3)
HU-OH:
EL271_RS03175
(19A)
Hu15:
SPNHU15_RS03445
(19A)
Hu17:
SPNHU17_RS03385
(1)
INV104:
INV104_RS03360
(14)
INV200:
SPNINV200_RS03235
(14)
JJA:
SPJ_RS03180
(19F)
MDRSPN001:
MDRSPN_RS07210
(1)
NCTC7465:
AT689_RS10310
(2)
NCTC7466:
DQM66_RS03220
(4)
NU83127:
EL277_RS03460
(3)
OXC141:
SPNOXC_RS03360
(1)
P1031:
SPP_RS03440
(2)
R6:
SPR_RS03045
(19A)
SP49:
BMJ42_RS03950
(1)
SPN032672:
SPN032672_RS09620
(3)
SPN034156:
SPN034156_RS09285
(3)
SPN034183:
SPN034183_RS03375
(3)
SPN994038:
SPN994038_RS03295
(3)
SPN994039:
SPN994039_RS03295
(3)
SPNA45:
SPNA45_RS05745
(19F)
ST556:
MYY_RS03745
(19F)
Taiwan19F-14:
SPT_RS03525
(19A)
TCH8431/19A:
HMPREF0837_RS04695
(4)
Xen35:
CXP32_RS03435

⊟Genome Viewer

TIGR4
D39
D39V
Hungary19A-6
EF3030

⊟Alignments

• alignment of orthologues:
  CLUSTAL format alignment by MAFFT L-INS-i (v7.505)
  
  
  TIGR4           MKKLFILLSTFFLSFFLAWIIVLRAPQYLYASYDSVSLLRVKKDTQEPTREVFEQELENF
  D39             MKKLFILLSTFFLSFFLAWIIVLRAPQYLYASYDSVSLLRVKKDTQEPTREVFEQELENF
  D39V            MKKLFILLSTFFLSFFLAWIIVLRAPQYLYASYDSVSLLRVKKDTQEPTREVFEQELENF
  EF3030          MKKLFILLSTFFLSFFLAWIIVLRAPQYLYASYDSVSLLRVKKDTQEPTREVFEQELENF
                  ************************************************************
  
  TIGR4           ANSEQSLIARRIVEPSKDGTTHFTYATYGQGTLPKEFQEASQESRERSDPLNSYLLLSGS
  D39             ANSEQSLIARRIVEPSKDGTTHFTYATYGQGTLPKEFQEASQESRERSDPLNSYLLLSGS
  D39V            ANSEQSLIARRIVEPSKDGTTHFTYATYGQGTLPKEFQEASQESRERSDPLNSYLLLSGS
  EF3030          ANSEQSLIARRIVEPSKDGTTHFTYATYGQGTLPKEFQEASQESRERSDPLNSYLLLSGS
                  ************************************************************
  
  TIGR4           LTKEKLADKLGDLGYKASADRKIPPYFLAFRILLNPLILISLAIFGLSFFALVIITRIKE
  D39             LTKEKLADKLGDLGYKASADRKIPPYFLAFRILLNPLILISLAIFGLSFFALVIITRIKE
  D39V            LTKEKLADKLGDLGYKASADRKIPPYFLAFRILLNPLILISLAIFGLSFFALVIITRIKE
  EF3030          LTKEKLADKLGDLGYKASADRKIPPYFLAFRILLNPLILISLAIFGLSFFALVIITRIKE
                  ************************************************************
  
  TIGR4           MRAAGIKLFSGQTLLSIMGHSLSTDIKWLLLSALLSFLGGGVVLFSQGLFYPILLATYGF
  D39             MRAAGIKLFSGQTLLSIMGHSLSTDIKWLLLSALLSFLGGGVVLFSQGLFYPILLATYGF
  D39V            MRAAGIKLFSGQTLLSIMGHSLSTDIKWLLLSALLSFLGGGVVLFSQGLFYPILLATYGF
  EF3030          MRAAGIKLFSGQTLLSIMGHSLSTDIKWLLLSALLSFLGGGVVLFSQGLFYPILLATYGF
                  ************************************************************
  
  TIGR4           GISFYLLFLLAISILLMLLYLMSLSYKALVPVIKGRLPLKRLMALTLLCQLVAVFTVGYA
  D39             GISFYLLFLLAISILLMLLYLMSLNYKALVPVIKGRLPLKRLMILTLLCQLVAVFTVGYA
  D39V            GISFYLLFLLAISILLMLLYLMSLNYKALVPVIKGRLPLKRLMILTLLCQLVAVFTVGYA
  EF3030          GISFYLLFLLAISILLMLLYLMSLSYKALVPVIKGRLPLKRLMILTLLCQLVAVFTVGYA
                  ************************.****************** ****************
  
  TIGR4           VKTGLTSYQRLKELEISKQAWQDRADYYQISFGLGDRGKDTENQSKWYAFAKEAIEEEQA
  D39             VKTGLTSYQRLKELEISKQAWQDRADYYQISFGLGDRGKDTENQSKWYAFAKEAIEEEQA
  D39V            VKTGLTSYQRLKELEISKQAWQDRADYYQISFGLGDRGKDTENQSKWYAFAKEAIEEEQA
  EF3030          VKTGLTSYQRLKELEISKQAWQDRADYYQISFGLGDRGKDTENQSKWYAFAKEAIEEEQA
                  ************************************************************
  
  TIGR4           LYVKDNLLHFANPQGKNEQGETLDTYSSDANTLYVSPSYLDKEKVVVDAETKQKLAHLQK
  D39             LYVKDNLLHFANPQGKNEQGETLDTYSPDANTLYVSPSYLDKEKVVVDAETKQKLAHLQK
  D39V            LYVKDNLLHFANPQGKNEQGETLDTYSPDANTLYVSPSYLDKEKVVVDAETKQKLAHLQK
  EF3030          LYVKDNLLHFANPQGKNEQGETLDTYSPDANTLYVSPSYLDKEKVVVDAETKQKLAHLQK
                  ***************************.********************************
  
  TIGR4           GEFILLLPEHLRSREAELKKVFEERLSYYGKSGEEASAPLDYEMKAHVSYLSMGEKRFVY
  D39             GEFILLLPEHLRSREAELKKVFEERLSYYGKSGEEASAPLDYEMKAHVSYLSMGEKRFVY
  D39V            GEFILLLPEHLRSREAELKKVFEERLSYYGKSGEEASAPLDYEMKAHVSYLSMGEKRFVY
  EF3030          GEFILLLPEHLRSREAELKKVFEERLSYYGKSGEEASAPLDYEMKAHVSYLSMGEKRFVY
                  ************************************************************
  
  TIGR4           NNGENPVSTQYLTDPILVVFTPTSTGDSFISLSSWSINAGKQLFIKGYESGLELLKKAGI
  D39             NNGENPVSTQYLTDPILVVFTPTSTGDSFISLSSWSINAGKQLFIKGYESGLELLKKAGI
  D39V            NNGENPVSTQYLTDPILVVFTPTSTGDSFISLSSWSINAGKQLFIKGYESGLELLKKAGI
  EF3030          NNGENPVSTQYLTDPILVVFTPTSTGDSFISLSSWSINAGKQLFIKGYESGLELLKKAGI
                  ************************************************************
  
  TIGR4           YEQVSYLKEGRSVYLTRYNEVQTETATLILGAIVGIASSLLLFYSVNLLYFEQFRRDILI
  D39             YEQVSYLKEGRSVYLTRYNEVQTETATLILGAIVGIASSLLLFYSVNLLYFEQFRRDILI
  D39V            YEQVSYLKEGRSVYLTRYNEVQTETATLILGAIVGIASSLLLFYSVNLLYFEQFRRDILI
  EF3030          YEQVSYLKEGRSVYLTRYNEVQTETATLILGAIVGIASSLLLFYSVNLLYFEQFRRDILI
                  ************************************************************
  
  TIGR4           KRISGLRFFETHAQYMVSQFASFVFGASLFILSSRDLVIGLLTLLVFLASAVLTLYRQAQ
  D39             KRISGLRFFETHAQYMVSQFASFVFGASLFILSSRDLVIGLLTLLVFLASAVLTLYRQAQ
  D39V            KRISGLRFFETHAQYMVSQFASFVFGASLFILSSRDLVIGLLTLLVFLASAVLTLYRQAQ
  EF3030          KRISGLRFFETHAQYMVSQFASFVFGASLFILSSRDLVIGLLTLLVFLASAVLTLYRQAQ
                  ************************************************************
  
  TIGR4           KESRVSMTIMKGK
  D39             KESRVSMTIMKGK
  D39V            KESRVSMTIMKGK
  EF3030          KESRVSMTIMKGK
                  *************