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PangenomeTIGR4
serotype 4
D39serotype 2
D39Vserotype 2
Hungary19A-6serotype 19A
EF3030serotype 19F
670-6Bserotype 6B
6A-10serotype 6A
70585serotype 5
A026serotype 19F
A66serotype 3
AP200serotype 11A
ASP0581serotype 12F
ATCC 49619serotype 19F
ATCC 700669serotype 23F
BVJ1JLserotype 1
CGSP14serotype 14
G54serotype 19F
HU-OHserotype 3
Hu15serotype 19A
Hu17serotype 19A
INV104serotype 1
INV200serotype 14
JJAserotype 14
MDRSPN001serotype 19F
NCTC7466serotype 2
NU83127serotype 4
OXC141serotype 3
P1031serotype 1
R6serotype 2
SP49serotype 19A
SPN032672serotype 1
SPN034156serotype 3
SPN034183serotype 3
SPN994038serotype 3
SPN994039serotype 3
SPNA45serotype 3
ST556serotype 19F
TCH8431/19Aserotype 19A
Taiwan19F-14serotype 19F
Xen35serotype 4
gamPNI0373serotype 1
⊟Summary[edit | edit source]
- pan ID?: PNEUPAN001620000
- symbol?: pabB
- synonym:
- description?: aminodeoxychorismate synthase component I
- aminodeoxychorismate synthase component I
- chorismate binding enzyme
- putative chorismate binding enzyme
- aminodeoxychorismate synthase, component I
- Aminodeoxychorismate synthase component 1
- chorismate binding enzyme para-aminobenzoate synthetase
- Para-aminobenzoate synthetase
- aminobenzoate synthetase
- Anthranilate/para-aminobenzoate synthases component I
- Bifunctional para-aminobenzoate synthase, aminase component/aminodeoxychorismate lyase
- Isochorismate synthase MenF
- Para-aminobenzoate synthase, aminase component / Aminodeoxychorismate lyase
- para-aminobenzoate synthase, component I
- para-aminobenzoate synthases component I
- para-aminobenzoate synthetase component I
descriptions from strain specific annotations:
- strand?: +
- coordinates?: 1960209..1961930
- occurrence?: in 100% of 41 strains
⊟Orthologs[edit | edit source]
SPN034156:
SPN034156_RS09190 (pabB)
SPN034183:
SPN034183_RS03280 (pabB)
SPN994038:
SPN994038_RS03200 (pabB)
⊟Genome Viewer[edit | edit source]
| TIGR4 | |
| D39 | |
| D39V | |
| Hungary19A-6 | |
| EF3030 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.505)
TIGR4 MHRKTVIDFRTLGERYTFTQPIKELKTRNVEEVADLLAQVESYQEQGYYVVGYVSYEAAP
D39 MHRKTVIDFRALGERYIFTKPIKELKTRNLTEVADLLAQVESYQEQGYYVVGYVSYEAAP
D39V MHRKTVIDFRALGERYIFTKPIKELKTRNLTEVADLLAQVESYQEQGYYVVGYVSYEAAP
Hungary19A-6 MHRKTVIDFRTLGERYTFTQPIKELKTRNVEEVADLLAQVESYQEQGYYVVGYVSYEAAP
EF3030 MHRKTVIDFRTLGERYTFTQPIKELKTRNVEEVADLLAQVESYQEQGYYVVGYVSYEAAP
**********:***** **:*********: *****************************
TIGR4 AFEEKLAVHKDPLLGEYLLYFTVHDIVETSPIPLTYEDIDLPSNWQEVTSAADYEKAIAQ
D39 AFEEKLAVHKAPLLGEYLLYFTVHDRVETSPIPLTYDEVDLPSNWQEVTSAADYEKAIAQ
D39V AFEEKLAVHKAPLLGEYLLYFTVHDRVETSPIPLTYDEVDLPSNWQEVTSAADYEKAIAQ
Hungary19A-6 AFEEKLAVHKVPLLGEYLLYFTVHDRVETSPIPLTYEDIDLPSNWQEVTSAADYEKAIAQ
EF3030 AFEEKLAVHKDPLLGEYLLYFTVHDSVETSPIPLTYEDIDLPSNWQEVTSAADYEKAIAQ
********** ************** **********:::*********************
TIGR4 IHHHLRQGDTYQVNYTVQLKQKLNANPFAIYNRMVVEQEAGYNAYVEHDEMTVISMSPEL
D39 IHHHLRQGDTYQVNYTVQLKQDLSANPFAIYNRMVVEQEAGYNAYVEHDDMAVISMSPEL
D39V IHHHLRQGDTYQVNYTVQLKQDLSANPFAIYNRMVVEQEAGYNAYVEHDDMAVISMSPEL
Hungary19A-6 IHHHLRQGDTYQVNYTVQLKQKLSANPFAIYNRMVVEQEAGYNAYVEHDEMAVISMSPEL
EF3030 IHHHLRQGDTYQVNYTVQLKQKLSANPFAIYNRMVVEQEAGYNAYVEHDEMAVISMSPEL
*********************.*.*************************:*:********
TIGR4 FFEQNDRELTTRPMKGTTQRGVTDQEDLEQASWLEQDPKNRSENMMIVDLLRNDMNRISE
D39 FFEQNDRELTTRPMKGTTQRAITDQEDLEQASWLEQDSKNRSENMMIVDLLRNDMNRISE
D39V FFEQNDRELTTRPMKGTTQRAITDQEDLEQASWLEQDSKNRSENMMIVDLLRNDMNRISE
Hungary19A-6 FFEQNDRELTTRPMKGTTQRGVTDQEDLEQASWLEQDPKNRSENMMIVDLLRNDMNRISE
EF3030 FFEQNDRELTTRPMKGTTQRGVTDQEDLEQASWLEQDPKNRSENMMIVDLLRNDMNRISE
********************.:***************.**********************
TIGR4 VGSEHVERLCQVEQYSTVWQMTSTIKSQLREDVDLVEIFRSLFPCGSITGAPKIATMEII
D39 VGSEHVERLCQVEQYSTVWQMTSTIKSQLRADVDLVTIFRSLFPCGSITGAPKIATMEII
D39V VGSEHVERLCQVEQYSTVWQMTSTIKSQLRADVDLVTIFRSLFPCGSITGAPKIATMEII
Hungary19A-6 VGSEHVERLCQVEQYSTVWQMTSTIKSQLREDVDLVEIFRSLFPCGSITGAPKIATMEII
EF3030 VGSEHVERLCQVEQYSTVWQMTSTIKSQLREDVDLVEIFRSLFPCGSITGAPKIATMEII
****************************** ***** ***********************
TIGR4 KDLEPQPRGVYCGTIGLLLPNGRRIFNVAIRTIQLHKGQAIYGVGGGITWDSTWESEYRE
D39 KDLEPQPRGVYCGTIGLLHPNGRRIFNVAIRTIQLHQGEAIYGVGGGITWDSTWQSEYRE
D39V KDLEPQPRGVYCGTIGLLHPNGRRIFNVAIRTIQLHQGEAIYGVGGGITWDSTWQSEYRE
Hungary19A-6 KDLEPQPRGVYCGTIGLLLPNGRRIFNVAIRTIQLHKGQAIYGVGGGITWDSTWESEYRE
EF3030 KNLEPQPRGVYCGTIGLLLPNGRRIFNVAIRTIQLHKGQAIYGVGGGITWDSTWESEYRE
*:**************** *****************:*:***************:*****
TIGR4 VHQKAAVLYRKQARFQLITTGKISQKQLMFEEQHLERLRKASRYFAFPFDAEDLGHKIEE
D39 VHQKAAVLYRKQARFQLITTGKISQKNLLFEEQHLERLRTASRYFAFPYDAEDLRQKIEA
D39V VHQKAAVLYRKQARFQLITTGKISQKNLLFEEQHLERLRTASRYFAFPYDAEDLRQKIEA
Hungary19A-6 VHQKAAVLYRKQARFQLITTGEISQKNLLFEDQHLERLRKASRYFAFPFDAEDLGHKIEE
EF3030 VHQKAAVLYRKQARFQLITTGEISQKNLLFEDQHLERLRKASRYFAFPFDAEDLGHKIEE
*********************:****:*:**:*******.********:***** :***
TIGR4 ECQDCEANRDYRLRISLSKSGEIEVNRQVLTPLSTSFCQAQVCLQEAALNQSFTYFKTTH
D39 ECQSCDIDQDYRLRISLSKSGEIELSRQILTPLSLHFCQAKLCLQEANLQQAFTYFKTTY
D39V ECQSCDIDQDYRLRISLSKSGEIELSRQILTPLSLHFCQAKLCLQEANLQQAFTYFKTTY
Hungary19A-6 ECQDCEANRDYRLRISLSKSGEIEVNRQVLTPLSTSFCQAQVCLQEAALNQSFTYFKTTH
EF3030 ECQDCEANQDYRLRISLSKSGEIEVNRQVLTPLSTSFCQAQVCLQEAALNQSFTYFKTTH
***.*: ::***************:.**:***** ****::***** *:*:*******:
TIGR4 RPHLSLGEQEKIYHNKSGELLETSIGNLVLKIAGKLYTPPIRLGILPGIYRQHLLETGQV
D39 RPHLNLGEQEIIYHNKSGELLETSIGNLVLKIAGKLYTPPIRLGILPGIYRQYLLETGQV
D39V RPHLNLGEQEIIYHNKSGELLETSIGNLVLKIAGKLYTPPIRLGILPGIYRQYLLETGQV
Hungary19A-6 RPHLSLGEQEKIYHNKSGELLETSIGNLVLKIAGKLYTPPIRLGILPGIYRQHLLETGQV
EF3030 RPHLSLGEQEKIYHNKSGELLETSIGNLVLKIAGKLYTPPIRLGILPGIYRQHLLETGQV
****.***** *****************************************:*******
TIGR4 EEKVLTLADLTQAEAIYGCNAVRGLYELSLEEN
D39 EEKVLTLTDFAQAEAIYGCNAVRGLYELSLEEN
D39V EEKVLTLTDFAQAEAIYGCNAVRGLYELSLEEN
Hungary19A-6 EEKVLTLADLTQAEAIYGCNAVRGLYELSLEEN
EF3030 EEKVLTLADLTQAEAIYGCNAVRGLYELSLEEN
*******:*::**********************