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PangenomeTIGR4
serotype 4
D39serotype 2
D39Vserotype 2
Hungary19A-6serotype 19A
EF3030serotype 19F
670-6Bserotype 6B
6A-10serotype 6A
70585serotype 5
A026serotype 19F
A66serotype 3
AP200serotype 11A
ASP0581serotype 12F
ATCC 49619serotype 19F
ATCC 700669serotype 23F
BVJ1JLserotype 1
CGSP14serotype 14
G54serotype 19F
HU-OHserotype 3
Hu15serotype 19A
Hu17serotype 19A
INV104serotype 1
INV200serotype 14
JJAserotype 14
MDRSPN001serotype 19F
NCTC7466serotype 2
NU83127serotype 4
OXC141serotype 3
P1031serotype 1
R6serotype 2
SP49serotype 19A
SPN032672serotype 1
SPN034156serotype 3
SPN034183serotype 3
SPN994038serotype 3
SPN994039serotype 3
SPNA45serotype 3
ST556serotype 19F
TCH8431/19Aserotype 19A
Taiwan19F-14serotype 19F
Xen35serotype 4
gamPNI0373serotype 1
⊟Summary[edit | edit source]
- pan ID?: PNEUPAN001656000
- symbol?: glnP3b
- synonym:
- description?: amino acid ABC transporter permease
- amino acid ABC transporter permease
- ABC transporter permease subunit
- ABC transporter membrane-spanning permease - glutamine transport
- ABC-type amino acid transport system, permease component
- amino acid ABC transporter, permease protein
- amino-acid ABC transporter integral membrane protein
- glutamine ABC transporter permease
- L-cystine transport system permease protein
- amino acid ABC transporter permease protein
- Glutamine ABC transporter permease GlnP3b
- L-cystine transport system permease protein TcyB
- pseudogene
descriptions from strain specific annotations:
- strand?: -
- coordinates?: 2010819..2013318
- occurrence?: in 73% of 41 strains
⊟Orthologs[edit | edit source]
SPN034156:
—
SPN034183:
—
SPN994038:
—
⊟Genome Viewer[edit | edit source]
| TIGR4 | |
| D39 | |
| D39V | |
| Hungary19A-6 | |
| EF3030 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.505)
TIGR4 ------------------------------------------------------------
D39 ------------------------------------------------------------
D39V ------------------------------------------------------------
Hungary19A-6 ------------------------------------------------------------
EF3030 MYIAVWGSLGSFLLGLIVSIIRHYRIPVLAQVATAYIELSRNTPLLIQLFFLYFGLPRIG
TIGR4 --------------------MQDSGIQVLFQGNNLLRILQGLGVTIGISILSVLLSMMFR
D39 --------------------MQDSGIQVLFQGNNLLRILQGLGVTIGISILSVLLSMMFG
D39V --------------------MQDSGIQVLFQGNNLLRILQGLGVTIGISILSVLLSMMFG
Hungary19A-6 --------------------MQDSGIQVLFQGNNLLRILQGLGVTIGISILSVLLSMMFG
EF3030 IVLSSEVCATLGLVFLGGSAMQDSGIQVLFQGNNLLRILQGLGVTIGISILSVLLSMMFG
***************************************
TIGR4 TVMGIIMTSHSRIIRFLTRLYLEFIRIMPQLVLLFIVYFGLARNFNINISGETSAIIVFT
D39 TVMGIIMTSHSRIIRFLTRLYLEFIRIMPQLVLLFIVYFGLARNFNINISGETSAIIVFT
D39V TVMGIIMTSHSRIIRFLTRLYLEFIRIMPQLVLLFIVYFGLARNFNINISGETSAIIVFT
Hungary19A-6 TVMGIIMTSHSRIIRFLTRLYLEFIRIMPQLVLLFIVYFGLARNFNINISGETSAIIIFT
EF3030 TVMGIIMTSHSRIIRFLTRLYLEFIRIMPQLVLLFIVYFGLARNFNINISGETSVIIVFT
******************************************************.**:**
TIGR4 LWGTAEMGDLVRGAITSLPKHQFESGQALGLTNVQLYYHIIIPQVLRRLLPQAINLVTRM
D39 LWGTAEMGDLVRGAITSLPKHQFESGQALGLTNVQLYYHIIIPQVLRRLLPQAINLVTRM
D39V LWGTAEMGDLVRGAITSLPKHQFESGQALGLTNVQLYYHIIIPQVLRRLLPQAINLVTRM
Hungary19A-6 LWGTAEMGDLVRGAITSLPKHQFESG----------------------------------
EF3030 LWGTAEMGDLVRGAITSLPKHQFESGQALGLTNVQLYYHIIIPQVLRRLLPQAINLVTRM
**************************
TIGR4 IKTTSLVVLIGVVEVTKVGQQIIDSNRLTIPTASFWIYGTILILYFAVCYPISKLSTHLE
D39 IKTTSLVVLIGVVEVTKVGQQIIDSNRLTIPTASFWIYGTILVLYFAVCYPISKLSTHLE
D39V IKTTSLVVLIGVVEVTKVGQQIIDSNRLTIPTASFWIYGTILVLYFAVCYPISKLSTHLE
Hungary19A-6 ------------------------------------------------------------
EF3030 IKTTSLVVLIGVVEVTKVGQQIIDSNRLTIPTTSFWIYGTILILYFAVCYPISKLSTHLE
TIGR4 KHWRN
D39 KHWRN
D39V KHWRN
Hungary19A-6 -----
EF3030 KHWRN