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PangenomeTIGR4
serotype 4
D39serotype 2
D39Vserotype 2
Hungary19A-6serotype 19A
EF3030serotype 19F
670-6Bserotype 6B
6A-10serotype 6A
70585serotype 5
A026serotype 19F
A66serotype 3
AP200serotype 11A
ASP0581serotype 12F
ATCC 49619serotype 19F
ATCC 700669serotype 23F
BVJ1JLserotype 1
CGSP14serotype 14
G54serotype 19F
HU-OHserotype 3
Hu15serotype 19A
Hu17serotype 19A
INV104serotype 1
INV200serotype 14
JJAserotype 14
MDRSPN001serotype 19F
NCTC7466serotype 2
NU83127serotype 4
OXC141serotype 3
P1031serotype 1
R6serotype 2
SP49serotype 19A
SPN032672serotype 1
SPN034156serotype 3
SPN034183serotype 3
SPN994038serotype 3
SPN994039serotype 3
SPNA45serotype 3
ST556serotype 19F
TCH8431/19Aserotype 19A
Taiwan19F-14serotype 19F
Xen35serotype 4
gamPNI0373serotype 1
⊟Summary[edit | edit source]
- pan ID?: PNEUPAN001715000
- symbol?: livF
- synonym:
- description?: ABC transporter ATP-binding protein
- ABC transporter ATP-binding protein
- branched-chain amino acid transport ATP-binding protein
- high-affinity branched-chain amino acid transport ATP-binding proteinlivF (LIV-I protein F)
- branched-chain amino acid ABC transporter, ATP-binding protein
- High-affinity branched-chain amino acid
- amino acid ABC transporter ATPase
- branched-chain amino acid transport protein
- ABC transporter, ATP-binding protein
- ABC transporter ATP-binding protein - branched chain amino acid transport
- ABC transporter family protein
- ABC-type branched-chain amino acid transport systems, ATPase component
- branched-chain amino acid ABC transporter ATP-binding protein LivF
- Branched-chain amino acid transport ATP-binding protein LivF
- Branched-chain amino acid transport ATP-binding protein LivF (TC 3.A.1.4.1)
- high-affinity branched-chain amino acid ABC transporter
- High-affinity branched-chain amino acid transport ATP-binding protein LivF
descriptions from strain specific annotations:
- strand?: +
- coordinates?: 2072576..2073286
- occurrence?: in 100% of 41 strains
⊟Orthologs[edit | edit source]
⊟Genome Viewer[edit | edit source]
| TIGR4 | |
| D39 | |
| D39V | |
| Hungary19A-6 | |
| EF3030 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.505)
TIGR4 MSMLKVENLSVHYGMIQAVRDVSFEVNEGEVVSLIGANGAGKTTILRTLSGLVRPSSGKI
D39 MSVLKVENLSVHYGMIQAVRDVSFEVNEGEVVSLIGANGAGKTTILRTLSGLVRPSSGKI
D39V MSVLKVENLSVHYGMIQAVRDVSFEVNEGEVVSLIGANGAGKTTILRTLSGLVRPSSGKI
Hungary19A-6 MSMLKVENLSVHYGMIQAVRDVSFEVNEGEVVSLIGANGAGKTTILRTLSGLVRPSSGKI
EF3030 MSMLKVENLSVHYGMIQAVRDVSFEVNEGEVVSLIGANGAGKTTILRTLSGLVRPSSGKI
**:*********************************************************
TIGR4 EFLGQEIQKMPAQKIVASGLSQVPEGRHVFPGLTVMENLEMGAFLKKNREENQANLKKVF
D39 EFLGQEIQKMPAQKIVAGGLSQVPEGRHVFPGLTVMENLEMGAFLKKNREENQANLKKVF
D39V EFLGQEIQKMPAQKIVAGGLSQVPEGRHVFPGLTVMENLEMGAFLKKNREENQANLKKVF
Hungary19A-6 EFLGQEIQKMPAQKIVAGGLSQVPEGRHVFPGLTVMENLEMGAFLKKNREENQANLKKVF
EF3030 EFLGQEIQKMPAQKIVAGGLSQVPEGRHVFPGLTVMENLEMGAFLKKNREENQANLKKVF
*****************.******************************************
TIGR4 SRFPRLEERKNQDAATLSGGEQQMLAMGRALMSTPKLLLLDEPSMGLAPIFIQEIFDIIQ
D39 SRFPRLEERKNQDAATLSGGEQQMLAMGRALMSTPKLLLLDEPSMGLAPIFIQEIFDIIQ
D39V SRFPRLEERKNQDAATLSGGEQQMLAMGRALMSTPKLLLLDEPSMGLAPIFIQEIFDIIQ
Hungary19A-6 SRFPRLEERKNQDAATLSGGEQQMLAMGRALMSTPKLLLLDEPSMGLAPIFIQEIFDIIQ
EF3030 SRFPRLEERKNQDAATLSGGEQQMLAMGRALMSTPKLLLLDEPSMGLAPIFIQEIFDIIQ
************************************************************
TIGR4 DIQKQGTTVLLIEQNANKALAISDRGYVLETGRIVLSGTGKELASSEEVRKAYLGG
D39 DIQKQGTTVLLIEQNANKALAISDRGYVLETGKIVLSGTGKELASSEEVRKAYLGG
D39V DIQKQGTTVLLIEQNANKALAISDRGYVLETGKIVLSGTGKELASSEEVRKAYLGG
Hungary19A-6 DIQKQGTTVLLIEQNANKALAISDRGYVLETGKIVLSGTGKELASSEEVRKAYLGG
EF3030 DIQKQGTTVLLIEQNANKALAISDRGYVLETGKIVLSGTGKELASSEEVRKAYLGG
********************************:***********************