PangenomeTIGR4

serotype 4

D39

serotype 2

D39V

serotype 2

Hungary19A-6

serotype 19A

EF3030

serotype 19F

670-6B

serotype 6B

6A-10

serotype 6A

70585

serotype 5

A026

serotype 19F

A66

serotype 3

AP200

serotype 11A

ASP0581

serotype 12F

ATCC 49619

serotype 19F

ATCC 700669

serotype 23F

BM6001

serotype 19F

BVJ1JL

serotype 1

CGSP14

serotype 14

G54

serotype 19F

HU-OH

serotype 3

Hu15

serotype 19A

Hu17

serotype 19A

INV104

serotype 1

INV200

serotype 14

JJA

serotype 14

MDRSPN001

serotype 19F

NCTC7465

serotype 1

NCTC7466

serotype 2

NU83127

serotype 4

OXC141

serotype 3

P1031

serotype 1

R6

serotype 2

SP49

serotype 19A

SPN032672

serotype 1

SPN034156

serotype 3

SPN034183

serotype 3

SPN994038

serotype 3

SPN994039

serotype 3

SPNA45

serotype 3

ST556

serotype 19F

TCH8431/19A

serotype 19A

Taiwan19F-14

serotype 19F

Xen35

serotype 4

gamPNI0373

serotype 1

⊟Summary

• pan ID^?: PNEUPAN001716000
• symbol^?: khpA
• synonym: kphA
• description^?: RNA-binding protein KphA

  descriptions from strain specific annotations:

  • RNA-binding protein KphA
  • Conserved hypothetical protein
  • conserved domain protein
  • KH domain-containing protein
  • KH domain protein
  • RNA-binding protein
  • KH domain RNA-binding protein
  • KH domain RNA binding protein YlqC
  • Predicted RNA-binding protein (contains KH domain)
  • putative RNA binding protein
  • uncharacterized protein family UPF0109
  • UPF0109 protein
• strand^?: +
• coordinates^?: 2160238..2160477
• occurrence^?: in 100% of 43 strains

⊟Orthologs

(4)^?
TIGR4:
SP_RS03785 (kphA)
(2)
D39:
SPD_RS03640 (kphA)
(2)
D39V:
SPV_RS03635 (kphA)
(19A)
Hungary19A-6:
SPH_RS04220 (kphA)
(19F)
EF3030:
EF3030_RS03650 (kphA)
(6B)^?
670-6B:
SP670_RS07685 (kphA)
(6A)
6A-10:
HKM25_RS03645 (kphA)
(5)
70585:
SP70585_RS04030 (kphA)
(19F)
A026:
T308_RS03660 (kphA)
(3)
A66:
A66_RS03510 (kphA)
(11A)
AP200:
SPAP_RS03725 (kphA)
(12F)
ASP0581:
EL334_RS03820 (kphA)
(19F)
ATCC 49619:
EL263_RS03835 (kphA)
(23F)
ATCC 700669:
SPN23F_RS03555 (kphA)
(19F)
BM6001:
ODS73_RS04060 (kphA)
(1)
BVJ1JL:
JN057_RS03750 (kphA)
(14)
CGSP14:
SPCG_RS03770 (kphA)
(19F)
G54:
SPG_RS03555 (kphA)
(1)
gamPNI0373:
HMPREF1038_RS03865 (kphA)
(3)
HU-OH:
EL271_RS03565 (kphA)
(19A)
Hu15:
SPNHU15_RS03860 (kphA)
(19A)
Hu17:
SPNHU17_RS03800 (kphA)
(1)
INV104:
INV104_RS03780 (kphA)
(14)
INV200:
SPNINV200_RS03650 (kphA)
(14)
JJA:
SPJ_RS03555 (kphA)
(19F)
MDRSPN001:
MDRSPN_RS03270 (kphA)
(1)
NCTC7465:
AT689_RS09945 (kphA)
(2)
NCTC7466:
DQM66_RS03640 (kphA)
(4)
NU83127:
EL277_RS03880 (kphA)
(3)
OXC141:
SPNOXC_RS03740 (kphA)
(1)
P1031:
SPP_RS03815 (kphA)
(2)
R6:
SPR_RS03430 (kphA)
(19A)
SP49:
BMJ42_RS04415 (kphA)
(1)
SPN032672:
SPN032672_RS10035 (kphA)
(3)
SPN034156:
SPN034156_RS09665 (kphA)
(3)
SPN034183:
SPN034183_RS03755 (kphA)
(3)
SPN994038:
SPN994038_RS03675 (kphA)
(3)
SPN994039:
SPN994039_RS03675 (kphA)
(3)
SPNA45:
SPNA45_RS06170 (kphA)
(19F)
ST556:
MYY_RS04135 (kphA)
(19F)
Taiwan19F-14:
SPT_RS03920 (kphA)
(19A)
TCH8431/19A:
HMPREF0837_RS05085 (kphA)
(4)
Xen35:
CXP32_RS03850 (kphA)

⊟Genome Viewer

TIGR4
D39
D39V
Hungary19A-6
EF3030

⊟Alignments

• alignment of orthologues:
  CLUSTAL format alignment by MAFFT L-INS-i (v7.505)
  
  
  TIGR4           MDTIENLIIAIVKPLISQPDALTIKIEDTPEFLEYHLNLDQSDVGRVIGRKGRTISAIRT
  D39             MDTIENLIIAIVKPLISQPDALTIKIEDTPEFLEYHLNLDQSDVGRVIGRKGRTISAIRT
  D39V            MDTIENLIIAIVKPLISQPDALTIKIEDTPEFLEYHLNLDQSDVGRVIGRKGRTISAIRT
  Hungary19A-6    MDTIENLIIAIVKPLISQPDALTIKIEDTPEFLEYHLNLDQSDVGRVIGRKGRTISAIRT
  EF3030          MDTIENLIIAIVKPLISQPDALTIKIEDTPEFLEYHLNLDQSDVGRVIGRKGRTISAIRT
                  ************************************************************
  
  TIGR4           IVYSVPTEYKKVRIVIDEK
  D39             IVYSVPTEYKKVRIVIDEK
  D39V            IVYSVPTEYKKVRIVIDEK
  Hungary19A-6    IVYSVPTEYKKVRIVIDEK
  EF3030          IVYSVPTEYKKVRIVIDEK
                  *******************