Jump to navigation
Jump to search
PangenomeTIGR4
serotype 4
D39serotype 2
D39Vserotype 2
Hungary19A-6serotype 19A
EF3030serotype 19F
670-6Bserotype 6B
6A-10serotype 6A
70585serotype 5
A026serotype 19F
A66serotype 3
AP200serotype 11A
ASP0581serotype 12F
ATCC 49619serotype 19F
ATCC 700669serotype 23F
BM6001serotype 19F
BVJ1JLserotype 1
CGSP14serotype 14
G54serotype 19F
HU-OHserotype 3
Hu15serotype 19A
Hu17serotype 19A
INV104serotype 1
INV200serotype 14
JJAserotype 14
MDRSPN001serotype 19F
NCTC7465serotype 1
NCTC7466serotype 2
NU83127serotype 4
OXC141serotype 3
P1031serotype 1
R6serotype 2
SP49serotype 19A
SPN032672serotype 1
SPN034156serotype 3
SPN034183serotype 3
SPN994038serotype 3
SPN994039serotype 3
SPNA45serotype 3
ST556serotype 19F
TCH8431/19Aserotype 19A
Taiwan19F-14serotype 19F
Xen35serotype 4
gamPNI0373serotype 1
⊟Summary[edit | edit source]
- pan ID?: PNEUPAN001743000
- symbol?: fabG2
- synonym:
- description?: 3-oxoacyl-ACP reductase
- 3-oxoacyl-ACP reductase
- putative short chain dehydrogenase
- 3-ketoacyl-(acyl-carrier-protein) reductase
- 3-Ketoacyl-ACP reductase
- short chain dehydrogenase
- NAD(P)-dependent dehydrogenase
- oxidoreductase, short chain dehydrogenase/reductase family protein
- 3-beta-hydroxycholanate 3-dehydrogenase (NAD(+)) 2
- 3-oxoacyl-[acyl-carrier protein] reductase
- 3-oxoacyl-[acyl-carrier-protein] reductase activity
- Cyclopentanol dehydrogenase
- Dihydroanticapsin 7-dehydrogenase
- enoyl-(Acyl carrier) reductase family protein
- fehydrogenase
- Gluconate 5-dehydrogenase
- oxidoreductase, short chain dehydrogenase/reductase
- oxidoreductase, short chain dehydrogenase/reductase family
descriptions from strain specific annotations:
- strand?: +
- coordinates?: 2185669..2186367
- occurrence?: in 100% of 43 strains
⊟Orthologs[edit | edit source]
⊟Genome Viewer[edit | edit source]
| TIGR4 | |
| D39 | |
| D39V | |
| Hungary19A-6 | |
| EF3030 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.505)
TIGR4 MTKRVLITGVSSGIGLAQARLFLEKGYQVYGVDQGEKPLLEGDFRFLQRDLTLDLEPIFD
D39 MTKRVLITGVSSGIGLAQARLFLEKGYQVYGVDQGEKPLLEGDFRFLQRDLTLDLEPIFD
D39V MTKRVLITGVSSGIGLAQARLFLEKGYQVYGVDQGEKPLLEGDFRFLQRDLTLDLEPIFD
Hungary19A-6 MTKRVLITGVSSGIGLAQARLFLEKGYQVYGVDQGEKPLLEGDFHFLQRDLTLDLEPIFD
EF3030 MTKRVLITGVSSGIGLAQARLFLEKGYQVYGVDQGEKPLLEGDFRFLQRDLTLDLEPIFD
********************************************:***************
TIGR4 WCPQVDVLCNTAGVLDDYKPLLEQTAQDIQEIFEINYIIPVELTRYYLTQMLENKKGIII
D39 WCPQVDVLCNTAGVLDDYKPLLEQTAQDIQEIFEINYIIPVELTRYYLTQMLENKKGIII
D39V WCPQVDVLCNTAGVLDDYKPLLEQTAQDIQEIFEINYIIPVELTRYYLTQMLENKKGIII
Hungary19A-6 WCPQVDVLCNTAGVLDDYKPLLEQTAQDIQEIFEINYIIPVELTRYYLTQMLENKKGIII
EF3030 WCPQVDVLCNTAGVLDDYKPLLEQTAQDIQEIFEINYIIPVELTRYYLTQMLENKKGIII
************************************************************
TIGR4 NMCSIASSLAGGGGHAYTSSKHALAGFTKQLALDYAEAGIQVFGIAPGAVKTAMTAADFE
D39 NMCSIASSLAGGGGHAYTSSKHALAGFTKQLALDYAEAGIQVFGIAPGAVKTAMTAADFE
D39V NMCSIASSLAGGGGHAYTSSKHALAGFTKQLALDYAEAGIQVFGIAPGAVKTAMTAADFE
Hungary19A-6 NMCSIASSLAGGGGHAYTSSKHALAGFTKQLALDYAEAGIQVFGIAPGAVKTAMTAADFE
EF3030 NMCSIASSLAGGGGHAYTSSKHALAGFTKQLALDYAEAGIQVFGIAPGAVKTAMTAADFE
************************************************************
TIGR4 PGGLADWVASETPIKRWIEPEEIAELSLFLASGKASAMQGQILTIDGGWSLK
D39 PGGLADWVASETPIKRWIEPEEIAELSLFLASGKASAMQGQILTIDGGWSLK
D39V PGGLADWVASETPIKRWIEPEEIAELSLFLASGKASAMQGQILTIDGGWSLK
Hungary19A-6 PGGLADWVASETPIKRWIEPEEIAELSLFLASGKASAMQGQILTIDGGWSLK
EF3030 PGGLADWVASETPIKRWIEPEEIAELSLFLASGKASAMQGQILTIDGGWSLK
****************************************************