Jump to navigation
Jump to search
PangenomeTIGR4
serotype 4
D39serotype 2
D39Vserotype 2
Hungary19A-6serotype 19A
EF3030serotype 19F
670-6Bserotype 6B
6A-10serotype 6A
70585serotype 5
A026serotype 19F
A66serotype 3
AP200serotype 11A
ASP0581serotype 12F
ATCC 49619serotype 19F
ATCC 700669serotype 23F
BM6001serotype 19F
BVJ1JLserotype 1
CGSP14serotype 14
G54serotype 19F
HU-OHserotype 3
Hu15serotype 19A
Hu17serotype 19A
INV104serotype 1
INV200serotype 14
JJAserotype 14
MDRSPN001serotype 19F
NCTC7465serotype 1
NCTC7466serotype 2
NU83127serotype 4
OXC141serotype 3
P1031serotype 1
R6serotype 2
SP49serotype 19A
SPN032672serotype 1
SPN034156serotype 3
SPN034183serotype 3
SPN994038serotype 3
SPN994039serotype 3
SPNA45serotype 3
ST556serotype 19F
TCH8431/19Aserotype 19A
Taiwan19F-14serotype 19F
Xen35serotype 4
gamPNI0373serotype 1
⊟Summary[edit | edit source]
- pan ID?: PNEUPAN001752000
- symbol?: yhbU
- synonym:
- description?: peptidase U32 family protein
- peptidase U32 family protein
- protease
- putative peptidase
- U32 family peptidase
- peptidase U32
- putative protease YhbU
- conserved hypothetical protein
- Collagenase-like protease
- peptidase, U32 family
- peptidase, U32 family small subunit [C1]
- peptidase family U32
descriptions from strain specific annotations:
- strand?: +
- coordinates?: 2195600..2196529
- occurrence?: in 100% of 43 strains
⊟Orthologs[edit | edit source]
⊟Genome Viewer[edit | edit source]
| TIGR4 | |
| D39 | |
| D39V | |
| Hungary19A-6 | |
| EF3030 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.505)
TIGR4 MEKIVITATAESIEQVEQLLEAGVDRIYVGEKDFGLRLPTTFSYDQLREIAKLVHDAGKE
D39 MEKIVITATAESIEQVEQLLEAGVDRIYVGEKDFGLRLPTTFSYDQLREIAKLVHDAGKE
D39V MEKIVITATAESIEQVEQLLEAGVDRIYVGEKDFGLRLPTTFSYDQLREIAKLVHDAGKE
Hungary19A-6 MEKIVITATAESIEQVEQLLEAGVDRIYVGEKDFGLRLPTTFSYDQLREIAKLVHDAGKE
EF3030 MEKIVITATAESIEQVEQLLEAGVDRIYVGEKDFGLRLPTTFSYDQLREIAKLVHDAGKE
************************************************************
TIGR4 LIVAVNALMHQDMMDRIKPFLNFLEEIKTDYITIGDAGVFYVVNRDGYSFKTIYDASTMV
D39 LLVAVNALMHQDMMDRIKPFLDFLEEIKTDYITIGDAGVFYVVNRDGYSFKTIYDASTMV
D39V LLVAVNALMHQDMMDRIKPFLDFLEEIKTDYITIGDAGVFYVVNRDGYSFKTIYDASTMV
Hungary19A-6 LLVAVNALMHQDMMDRIKPFLDFLEEIKTDYITIGDAGVFYVVNRDGYSFKTIYDASTMV
EF3030 LIVAVNALMHQDMMDRIKPFLDLLEEIKTDYITIGDAGVFYVVNRDGYSFKTIYDASTMV
*:*******************::*************************************
TIGR4 TSSRQINFWGQKAGASEAVLAREIPSAELFKMPEILEIPAEVLVYGASVIHHSKRPLLQN
D39 TSSRQINFWGQKAGASEAVLAREIPSAELFKMPEILEIPAEVLVYGASVIHHSKRPLLQN
D39V TSSRQINFWGQKAGASEAVLAREIPSAELFKMPEILEIPAEVLVYGASVIHHSKRPLLQN
Hungary19A-6 TSSRQINFWGQKAGASEAVLAREIPSAELFKMPEILEIPAEVLVYGASVIHHSKRPLLQN
EF3030 TSSRQINFWGQKAGASEAVLAREIPSAELFKMPEILKIPAEVLVYGASVIHHSKRPLLQN
************************************:***********************
TIGR4 YYNFTHIDDEKTHKRDLFLAEPSDPESHYSIFEDNHGTHIFANNDLDLMIKLTELVEHGF
D39 YYNFTHIDDEKTHKRDLFLAEPSDPESHYSIFEDNHGTHIFANNDLDLMIKLTELVEHGF
D39V YYNFTHIDDEKTHKRDLFLAEPSDPESHYSIFEDNHGTHIFANNDLDLMIKLTELVEHGF
Hungary19A-6 YYNFTHIDDEKTHKRDLFLAEPSDPESHYSIFEDNHGTHIFANNDLDLMIKLTELVEHGF
EF3030 YYNFTHIDDEKTHKRDLFLAEPSDPESHYSIFEDNHGTHIFANNDLDLMIKLTELVEHGF
************************************************************
TIGR4 TRWKLEGLYTPGQNFVEIAKLFIQARSLIQEGNFSHAQAFLLDEEVRKLHPKNRFLDTGF
D39 TRWKLEGLYTPGQNFVEIAKLFIQARSLIQEGNFSHDQAFLLDEEVRKLHPKNRFLDTGF
D39V TRWKLEGLYTPGQNFVEIAKLFIQARSLIQEGNFSHDQAFLLDEEVRKLHPKNRFLDTGF
Hungary19A-6 TRWKLEGLYTPGQNFVEIAKLFIQARNLIQEGNFSHDQAFLLDEEVRKLHPKNRFLDTGF
EF3030 TRWKLEGLYTPGQNFVEIAKLFIQARSLIQEGNFSHDQAFLLDEEVRKLHPKNRFLDTGF
**************************.********* ***********************
TIGR4 YDYDPDMVR
D39 YDYDPDMVR
D39V YDYDPDMVR
Hungary19A-6 YDYDPDMVR
EF3030 YDYDPDMVR
*********