PangenomeTIGR4

serotype 4

D39

serotype 2

D39V

serotype 2

Hungary19A-6

serotype 19A

EF3030

serotype 19F

670-6B

serotype 6B

6A-10

serotype 6A

70585

serotype 5

A026

serotype 19F

A66

serotype 3

AP200

serotype 11A

ASP0581

serotype 12F

ATCC 49619

serotype 19F

ATCC 700669

serotype 23F

BM6001

serotype 19F

BVJ1JL

serotype 1

CGSP14

serotype 14

G54

serotype 19F

HU-OH

serotype 3

Hu15

serotype 19A

Hu17

serotype 19A

INV104

serotype 1

INV200

serotype 14

JJA

serotype 14

MDRSPN001

serotype 19F

NCTC7465

serotype 1

NCTC7466

serotype 2

NU83127

serotype 4

OXC141

serotype 3

P1031

serotype 1

R6

serotype 2

SP49

serotype 19A

SPN032672

serotype 1

SPN034156

serotype 3

SPN034183

serotype 3

SPN994038

serotype 3

SPN994039

serotype 3

SPNA45

serotype 3

ST556

serotype 19F

TCH8431/19A

serotype 19A

Taiwan19F-14

serotype 19F

Xen35

serotype 4

gamPNI0373

serotype 1

⊟Summary

• pan ID^?: PNEUPAN001793000
• symbol^?: deoC
• synonym:
• description^?: deoxyribose-phosphate aldolase

  descriptions from strain specific annotations:

  • deoxyribose-phosphate aldolase
  • 2-deoxyribose-5-phosphate aldolase
• strand^?: +
• coordinates^?: 2248277..2248939
• occurrence^?: in 100% of 43 strains

⊟Orthologs

(4)^?
TIGR4:
SP_RS04125 (deoC)
(2)
D39:
SPD_RS03970 (deoC)
(2)
D39V:
SPV_RS03965 (deoC)
(19A)
Hungary19A-6:
SPH_RS04550 (deoC)
(19F)
EF3030:
EF3030_RS03980 (deoC)
(6B)^?
670-6B:
SP670_RS07355 (deoC)
(6A)
6A-10:
HKM25_RS03935 (deoC)
(5)
70585:
SP70585_RS04335 (deoC)
(19F)
A026:
T308_RS06520 (deoC)
(3)
A66:
A66_RS03795 (deoC)
(11A)
AP200:
SPAP_RS04025 (deoC)
(12F)
ASP0581:
EL334_RS04155 (deoC)
(19F)
ATCC 49619:
EL263_RS04165 (deoC)
(23F)
ATCC 700669:
SPN23F_RS03885 (deoC)
(19F)
BM6001:
ODS73_RS04380 (deoC)
(1)
BVJ1JL:
JN057_RS04055 (deoC)
(14)
CGSP14:
SPCG_RS04075 (deoC)
(19F)
G54:
SPG_RS03855 (deoC)
(1)
gamPNI0373:
HMPREF1038_RS04200 (deoC)
(3)
HU-OH:
EL271_RS03885 (deoC)
(19A)
Hu15:
SPNHU15_RS04160 (deoC)
(19A)
Hu17:
SPNHU17_RS04105 (deoC)
(1)
INV104:
INV104_RS04070 (deoC)
(14)
INV200:
SPNINV200_RS03960 (deoC)
(14)
JJA:
SPJ_RS03885 (deoC)
(19F)
MDRSPN001:
MDRSPN_RS06050 (deoC)
(1)
NCTC7465:
AT689_RS09620 (deoC)
(2)
NCTC7466:
DQM66_RS03970 (deoC)
(4)
NU83127:
EL277_RS04235 (deoC)
(3)
OXC141:
SPNOXC_RS04040 (deoC)
(1)
P1031:
SPP_RS04165 (deoC)
(2)
R6:
SPR_RS03735 (deoC)
(19A)
SP49:
BMJ42_RS04795 (deoC)
(1)
SPN032672:
SPN032672_RS10335 (deoC)
(3)
SPN034156:
SPN034156_RS09965 (deoC)
(3)
SPN034183:
SPN034183_RS04055 (deoC)
(3)
SPN994038:
SPN994038_RS03975 (deoC)
(3)
SPN994039:
SPN994039_RS03975 (deoC)
(3)
SPNA45:
SPNA45_RS06490 (deoC)
(19F)
ST556:
MYY_RS06965 (deoC)
(19F)
Taiwan19F-14:
SPT_RS06765 (deoC)
(19A)
TCH8431/19A:
HMPREF0837_RS07905 (deoC)
(4)
Xen35:
CXP32_RS04190 (deoC)

⊟Genome Viewer

TIGR4
D39
D39V
Hungary19A-6
EF3030

⊟Alignments

• alignment of orthologues:
  CLUSTAL format alignment by MAFFT L-INS-i (v7.505)
  
  
  TIGR4           MKLNKYIDHTLLKQDAKKKQIDSLLSEAREYDFASVCVNPTWVEHAKKGLEGTDVKVCTV
  D39             MKLNKYIDHTLLKQDAKKKQIDSLLSEAREYGFASVCVNPTWVEHAKKGLEGTDVKVCTV
  D39V            MKLNKYIDHTLLKQDAKKKQIDSLLSEAREYGFASVCVNPTWVEHAKKGLEGTDVKVCTV
  Hungary19A-6    MKLNKYIDHTLLKQDAKKKQIDSLLSEAREYDFASVCVNPTWVEHAKKGLEGTDAKVCTV
  EF3030          MKLNKYIDHTLLKQDAKKKQIDSLLSEAREYGFASVCVNPTWVEHAKKGLEGTDVKVCTV
                  *******************************.**********************.*****
  
  TIGR4           VGFPLGATTSAVKAFETKEAIQNGADEIDMVINVGALKSGNLALVESDIRAVVEASGDKL
  D39             VGFPLGATTSAVKAFETKEAIQNGADEIDMVINVGALKSGNLALVESDIRAVVEASGDKL
  D39V            VGFPLGATTSAVKAFETKEAIQNGADEIDMVINVGALKSGNLALVESDIRAVVEASGDKL
  Hungary19A-6    VGFPLGATTSAVKAFETKEAIQNGADEIDMVINVGALKSGNLALVESDIRAVVEASGDKL
  EF3030          VGFPLGATTSAVKAFETKEAIQNGADEIDMVINVGALKSGNLALVESDIRAVVEASGDKL
                  ************************************************************
  
  TIGR4           VKVIIEACLLTDQEKVVVCQLAQKAGADFVKTSTGFSTGGATIADVTLMRETVGSDMGVK
  D39             VKVIIEACLLTDQEKIVVCQLAQKAGADFVKTSTGFSTGGATIADVTLMRETVGSDMGVK
  D39V            VKVIIEACLLTDQEKIVVCQLAQKAGADFVKTSTGFSTGGATIADVTLMRETVGSDMGVK
  Hungary19A-6    VKVIIEACLLTDQEKIVVCQLAQKAGADFVKTSTGFSTGGATIADVRLMCETVGSDMGVK
  EF3030          VKVIIEACLLTDQEKVVVCQLAQKAGADFVKTSTGFSTGGATIADVTLMRETVGSDMGVK
                  ***************:****************************** ** **********
  
  TIGR4           AAGGARSYADALAFVEAGATRIGTSAGVAILKGELADGDY
  D39             AAGGARSYADALAFVEAGATRIGTSAGVAILKGELADGDY
  D39V            AAGGARSYADALAFVEAGATRIGTSAGVAILKGELADGDY
  Hungary19A-6    AAGGARSYADALAFVEAGATRIGTSAGVAILKGELADGDY
  EF3030          AAGGARSYADALAFVEAGATRIGTSAGVAILKGELADGDY
                  ****************************************