From PneumoWiki
Jump to navigation Jump to search
PangenomeTIGR4
serotype 4
D39
serotype 2
D39V
serotype 2
Hungary19A-6
serotype 19A
EF3030
serotype 19F
670-6B
serotype 6B
6A-10
serotype 6A
70585
serotype 5
A026
serotype 19F
A66
serotype 3
AP200
serotype 11A
ASP0581
serotype 12F
ATCC 49619
serotype 19F
ATCC 700669
serotype 23F
BVJ1JL
serotype 1
CGSP14
serotype 14
G54
serotype 19F
HU-OH
serotype 3
Hu15
serotype 19A
Hu17
serotype 19A
INV104
serotype 1
INV200
serotype 14
JJA
serotype 14
MDRSPN001
serotype 19F
NCTC7466
serotype 2
NU83127
serotype 4
OXC141
serotype 3
P1031
serotype 1
R6
serotype 2
SP49
serotype 19A
SPN032672
serotype 1
SPN034156
serotype 3
SPN034183
serotype 3
SPN994038
serotype 3
SPN994039
serotype 3
SPNA45
serotype 3
ST556
serotype 19F
TCH8431/19A
serotype 19A
Taiwan19F-14
serotype 19F
Xen35
serotype 4
gamPNI0373
serotype 1

Summary[edit | edit source]

  • pan ID?: PNEUPAN001800000
  • symbol?: pnp_2
  • synonym:
  • description?: purine nucleoside phosphorylase

      descriptions from strain specific annotations:

    • purine nucleoside phosphorylase
    • purine nucleoside phosphorylase I, inosine and guanosine-specific
    • putative purine nucleoside phosphorylase
    • Purine nucleoside phosphorylase 1
    • Bifunctional purine nucleoside phosphorylase/N-ribosylnicotinamide phosphorylase
    • Purine nucleoside phosphorylase (inosine phosphorylase)
    • purine nucleoside phosphorylase, family 2
    • purine nucleoside phosphorylase, family protein 2
    • Purine nucleoside phosphorylase; N-Ribosylnicotinamide phosphorylase ## possible
  • strand?: +
  • coordinates?: 2167338..2168618
  • occurrence?: in 100% of 41 strains

Orthologs[edit | edit source]

Genome Viewer[edit | edit source]

TIGR4
D39
D39V
Hungary19A-6
EF3030

Alignments[edit | edit source]

  • alignment of orthologues:
    CLUSTAL format alignment by MAFFT L-INS-i (v7.505)


    TIGR4           MTFLNKIHETATFLKEKGIAAPEFGLILGSGLGELAEEIENPVVVDYAEIPNWGRSTVVG
    D39             MTFLNKIHETATFLKEKGIAAPEFGLILGSGLGELAEEIENPVVVDYAEIPNWGRSTVVG
    D39V            MTFLNKIHETATFLKEKGIAAPEFGLILGSGLGELAEEIENPVVVDYAEIPNWGRSTVVG
    Hungary19A-6    MTFLNKIHETATFLKEKGIAAPEFGLILGSGLGELAEEIENPVVVDYAEIPNWGRSTVVG
    EF3030          MTFLNKIHETATFLKEKGIAAPEFGLILGSGLGELAEEIENPVVVDYAEIPNWGRSTVVG
                    ************************************************************

    TIGR4           HAGKLVYGELAGRKVLALQGRFHFYEGNPLEVVTFPVRVMKVLGCEGVIVTNAAGGIGFG
    D39             HAGKLVYGELAGRKVLALQGRFHFYEGNPLEVVTFPVRVMKVLGCEGVIVTNAAGGIGFG
    D39V            HAGKLVYGELAGRKVLALQGRFHFYEGNPLEVVTFPVRVMKVLGCEGVIVTNAAGGIGFG
    Hungary19A-6    HAGKLVYGELAGRKVLALQGRFHFYEGNPLEVVTFPVRVMKVLGCEGVIVTNAAGGIRFG
    EF3030          HAGKLVYGELAGRKVLALQGRFHFYEGNPLEVVTFPVRVMKVLGCEGVIVTNAAGGIGFG
                    ********************************************************* **

    TIGR4           PGTLMAISDHINMTGQNPLMGENLDDFGPRFPDMSRAYTPEYRATAHEVAKKLNIKLDEG
    D39             PGTLMAISDHINMTGQNPLMGENLDDFGPRFPDMSRAYTPEYRATAHEVAKKLNIKLDEG
    D39V            PGTLMAISDHINMTGQNPLMGENLDDFGPRFPDMSRAYTPEYRATAHEVAKKLNIKLDEG
    Hungary19A-6    PGTLMAISDHINMTGQNPLMGENLDDFGPRFPDMSRAYTPEYRATAHEVAKKLNIKLDEG
    EF3030          PGTLMAISDHINMTGQNPLMGENLDDFGPRFPDMSRAYTPEYRATAHEVAKKLNIKLDEG
                    ************************************************************

    TIGR4           VYIGVTGPTYETPAEIRSYKTLGADAVGMSTVPEVIVAAHSGLKVLGISCITNFAAGFQE
    D39             VYIGVTGPTYETPAEIRSYKTLGADAVGMSTVPEVIVAAHSGLKVLGISCITNFAAGFQE
    D39V            VYIGVTGPTYETPAEIRSYKTLGADAVGMSTVPEVIVAAHSGLKVLGISCITNFAAGFQE
    Hungary19A-6    VYIGVTGPTYETPAEIRSYKTLGADAVGMSTVPEVIVAAHSGLKVLGISCITNFAAGFQE
    EF3030          VYIGVTGPTYETPAEIRSYKTLGADAVGMSTVPEVIVAAHSGLKVLGISCITNFAAGFQE
                    ************************************************************

    TIGR4           ELNHEEVVEVTERVKGDFKGLLKAILAEL
    D39             ELNHEEVVEVTERVKGDFKGLLKAILAEL
    D39V            ELNHEEVVEVTERVKGDFKGLLKAILAEL
    Hungary19A-6    ELNHEEVVEVTERVKGDFKGLLKAILAEL
    EF3030          ELNHEEVVEVT------------------
                    ***********