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PangenomeTIGR4
serotype 4
D39serotype 2
D39Vserotype 2
Hungary19A-6serotype 19A
EF3030serotype 19F
670-6Bserotype 6B
6A-10serotype 6A
70585serotype 5
A026serotype 19F
A66serotype 3
AP200serotype 11A
ASP0581serotype 12F
ATCC 49619serotype 19F
ATCC 700669serotype 23F
BM6001serotype 19F
BVJ1JLserotype 1
CGSP14serotype 14
G54serotype 19F
HU-OHserotype 3
Hu15serotype 19A
Hu17serotype 19A
INV104serotype 1
INV200serotype 14
JJAserotype 14
MDRSPN001serotype 19F
NCTC7465serotype 1
NCTC7466serotype 2
NU83127serotype 4
OXC141serotype 3
P1031serotype 1
R6serotype 2
SP49serotype 19A
SPN032672serotype 1
SPN034156serotype 3
SPN034183serotype 3
SPN994038serotype 3
SPN994039serotype 3
SPNA45serotype 3
ST556serotype 19F
TCH8431/19Aserotype 19A
Taiwan19F-14serotype 19F
Xen35serotype 4
gamPNI0373serotype 1
⊟Summary[edit | edit source]
- pan ID?: PNEUPAN001818000
- symbol?: sufC
- synonym:
- description?: Fe-S cluster assembly ATPase SufC
- Fe-S cluster assembly ATPase SufC
- FeS assembly ATPase SufC
- putative FeS assembly ATPase SufC, ABC transporter, ATP-binding protein
- putative ABC transporter ATP-binding protein
- ABC transporter, ATP-binding protein
- ABC transporter ATP-binding protein
- iron ABC transporter ATP-binding protein
- Iron-sulfur cluster assembly ATPase protein SufC
- ABC transporter ATPase
- ABC transporter ATP-binding protein - unknown substrate
- ABC-type transport system involved in Fe-S cluster assembly, ATPase component
descriptions from strain specific annotations:
- strand?: +
- coordinates?: 2279740..2280510
- occurrence?: in 100% of 43 strains
⊟Orthologs[edit | edit source]
(12F)
ASP0581:
EL334_RS04270 (sufC)
(19F)
ATCC 49619:
EL263_RS04280 (sufC)
(23F)
ATCC 700669:
SPN23F_RS04025 (sufC)
(14)
INV200:
SPNINV200_RS04105 (sufC)
(14)
JJA:
SPJ_RS04025 (sufC)
(19F)
MDRSPN001:
MDRSPN_RS05935 (sufC)
(19A)
SP49:
BMJ42_RS04915 (sufC)
(1)
SPN032672:
SPN032672_RS10465 (sufC)
(3)
SPN034156:
SPN034156_RS10115 (sufC)
(3)
SPN034183:
SPN034183_RS04205 (sufC)
(3)
SPN994038:
SPN994038_RS04125 (sufC)
(3)
SPN994039:
SPN994039_RS04125 (sufC)
⊟Genome Viewer[edit | edit source]
| TIGR4 | |
| D39 | |
| D39V | |
| Hungary19A-6 | |
| EF3030 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.505)
TIGR4 MSVLEIKDLHVEIEGKEILKGVNLTLKTGEIAAIMGPNGTGKSTLSAAIMGNPNYEVTKG
D39 MSVLEIKDLHVEIEGKEILKGVNLTLKTGEIAAIMGPNGTGKSTLSAAIMGNPNYEVTKG
D39V MSVLEIKDLHVEIEGKEILKGVNLTLKTGEIAAIMGPNGTGKSTLSAAIMGNPNYEVTKG
Hungary19A-6 MSVIEIKDLHVEIEGKEILKGVNLTLKTGEIAAIMGPNGTGKSTLSAAIMGNPNYEVTKG
EF3030 MSVLEIKDLHVEIEGKEILKGVNLTLKTGEIAAIMGPNGTGKSTLSAAIMGNPNYEVTKG
***:********************************************************
TIGR4 EVLFDGVNILELEVDERARMGLFLAMQYPSEIPGITNAEFLRAAMNAGKEDDEKISVREF
D39 EVLFDGVNILELEVDERARMGLFLAMQYPSEIPGITNAEFLRAAMNAGKEDDEKISVREF
D39V EVLFDGVNILELEVDERARMGLFLAMQYPSEIPGITNAEFLRAAMNAGKEDDEKISVREF
Hungary19A-6 EVLFDGVNILELEVDERARMGLFLAMQYPSEIPGITNAEFLRAAMNAGKEDDEKISVREF
EF3030 EVLFDGVNILELEVDERARMGLFLAMQYPSEIPGITNAEFLRAAMNAGKEDDEKISVREF
************************************************************
TIGR4 ITKLDEKMELLNMKEEMAERYLNEGFSGGEKKRNEILQLLMLEPTFALLDEIDSGLDIDA
D39 ITKLDEKMELLNMKEEMAERYLNEGFSGGEKKRNEILQLLMLEPTFALLDEIDSGLDIDA
D39V ITKLDEKMELLNMKEEMAERYLNEGFSGGEKKRNEILQLLMLEPTFALLDEIDSGLDIDA
Hungary19A-6 ITKLDEKMELLNMKEEMAERYLNEGFSGGEKKRNEILQLLMLEPTFALLDEIDSGLDIDA
EF3030 ITKLDEKMELLNMKEEMAERYLNEGFSGGEKKRNEILQLLMLEPTFALLDEIDSGLDIDA
************************************************************
TIGR4 LKVVSKGVNAMRGEGFGAMIITHYQRLLNYITPDVVHVMMEGRVVLSGGPELAARLEREG
D39 LKVVSKGVNAMRGEGFGAMIITHYQRLLNYITPDVVHVMMEGRVVLSGGPELAARLEREG
D39V LKVVSKGVNAMRGEGFGAMIITHYQRLLNYITPDVVHVMMEGRVVLSGGPELAARLEREG
Hungary19A-6 LKVVSKGVNAMRGEGFGAMIITHYQRLLNYITPDVVHVMMEGRVVLSGGPELAARLEREG
EF3030 LKVVSKGVNAMRGEGFGAMIITHYQRLLNYITPDVVHVMMEGRVVLSGGPELAARLEREG
************************************************************
TIGR4 YAKLAEELGYDYKEEL
D39 YAKLAEELGYDYKEEL
D39V YAKLAEELGYDYKEEL
Hungary19A-6 YAKLAEELGYDYKEEL
EF3030 YAKLAEELGYDYKEEL
****************