PangenomeTIGR4

serotype 4

D39

serotype 2

D39V

serotype 2

Hungary19A-6

serotype 19A

EF3030

serotype 19F

670-6B

serotype 6B

6A-10

serotype 6A

70585

serotype 5

A026

serotype 19F

A66

serotype 3

AP200

serotype 11A

ASP0581

serotype 12F

ATCC 49619

serotype 19F

ATCC 700669

serotype 23F

BM6001

serotype 19F

BVJ1JL

serotype 1

CGSP14

serotype 14

G54

serotype 19F

HU-OH

serotype 3

Hu15

serotype 19A

Hu17

serotype 19A

INV104

serotype 1

INV200

serotype 14

JJA

serotype 14

MDRSPN001

serotype 19F

NCTC7465

serotype 1

NCTC7466

serotype 2

NU83127

serotype 4

OXC141

serotype 3

P1031

serotype 1

R6

serotype 2

SP49

serotype 19A

SPN032672

serotype 1

SPN034156

serotype 3

SPN034183

serotype 3

SPN994038

serotype 3

SPN994039

serotype 3

SPNA45

serotype 3

ST556

serotype 19F

TCH8431/19A

serotype 19A

Taiwan19F-14

serotype 19F

Xen35

serotype 4

gamPNI0373

serotype 1

⊟Summary

• pan ID^?: PNEUPAN001819000
• symbol^?: sufD
• synonym:
• description^?: Fe-S cluster assembly protein SufD

  descriptions from strain specific annotations:

  • Fe-S cluster assembly protein SufD
  • FeS assembly protein SufD
  • FeS cluster assembly protein SufB
  • conserved hypothetical protein
  • Iron-sulfur cluster assembly protein SufD
  • ABC-type transport system involved in Fe-S cluster assembly, permease component
• strand^?: +
• coordinates^?: 2280538..2281800
• occurrence^?: in 100% of 43 strains

⊟Orthologs

(4)^?
TIGR4:
SP_RS04275 (sufD)
(2)
D39:
SPD_RS04090 (sufD)
(2)
D39V:
SPV_RS04085 (sufD)
(19A)
Hungary19A-6:
SPH_RS04695 (sufD)
(19F)
EF3030:
EF3030_RS04100 (sufD)
(6B)^?
670-6B:
SP670_RS07210 (sufD)
(6A)
6A-10:
HKM25_RS04055 (sufD)
(5)
70585:
SP70585_RS04480 (sufD)
(19F)
A026:
T308_RS06390 (sufD)
(3)
A66:
A66_RS03920 (sufD)
(11A)
AP200:
SPAP_RS04170 (sufD)
(12F)
ASP0581:
EL334_RS04275 (sufD)
(19F)
ATCC 49619:
EL263_RS04285 (sufD)
(23F)
ATCC 700669:
SPN23F_RS04030 (sufD)
(19F)
BM6001:
ODS73_RS04505 (sufD)
(1)
BVJ1JL:
JN057_RS04170 (sufD)
(14)
CGSP14:
SPCG_RS04225 (sufD)
(19F)
G54:
SPG_RS04000 (sufD)
(1)
gamPNI0373:
HMPREF1038_RS04335 (sufD)
(3)
HU-OH:
EL271_RS04010 (sufD)
(19A)
Hu15:
SPNHU15_RS04275 (sufD)
(19A)
Hu17:
SPNHU17_RS04215 (sufD)
(1)
INV104:
INV104_RS04205 (sufD)
(14)
INV200:
SPNINV200_RS04110 (sufD)
(14)
JJA:
SPJ_RS04030 (sufD)
(19F)
MDRSPN001:
MDRSPN_RS05930 (sufD)
(1)
NCTC7465:
AT689_RS09485 (sufD)
(2)
NCTC7466:
DQM66_RS04090 (sufD)
(4)
NU83127:
EL277_RS04355 (sufD)
(3)
OXC141:
SPNOXC_RS04195 (sufD)
(1)
P1031:
SPP_RS04300 (sufD)
(2)
R6:
SPR_RS03870 (sufD)
(19A)
SP49:
BMJ42_RS04920 (sufD)
(1)
SPN032672:
SPN032672_RS10470 (sufD)
(3)
SPN034156:
SPN034156_RS10120 (sufD)
(3)
SPN034183:
SPN034183_RS04210 (sufD)
(3)
SPN994038:
SPN994038_RS04130 (sufD)
(3)
SPN994039:
SPN994039_RS04130 (sufD)
(3)
SPNA45:
SPNA45_RS06630 (sufD)
(19F)
ST556:
MYY_RS06825 (sufD)
(19F)
Taiwan19F-14:
SPT_RS06625 (sufD)
(19A)
TCH8431/19A:
HMPREF0837_RS07775 (sufD)
(4)
Xen35:
CXP32_RS04310 (sufD)

⊟Genome Viewer

TIGR4
D39
D39V
Hungary19A-6
EF3030

⊟Alignments

• alignment of orthologues:
  CLUSTAL format alignment by MAFFT L-INS-i (v7.505)
  
  
  TIGR4           MTRENIKLFSEMHAEPSWLADLRQKAFDKIETLELPVIECVKFHRWNLGDGTITENEPSA
  D39             MTRENIKLFSEMHAEPSWLADLRQKAFDKIETLELPVIERVKFHRWNLGDGTITENEPSA
  D39V            MTRENIKLFSEMHAEPSWLADLRQKAFDKIETLELPVIERVKFHRWNLGDGTITENEPSA
  Hungary19A-6    MTRENIKLFSEMHAEPSWLADLRQKAFDKIETLELPVIERVKFHRWNLGDGTITENEPSA
  EF3030          MTRENIKLFSEMHAEPSWLADLRQKAFDKIETLELPVIERVKFHRWNLGDGTITENEPSA
                  *************************************** ********************
  
  TIGR4           NVPDFTALDHHLKLVQVGTQTVFEQTPVELAEQGVVFTDFHSALEEIPELIEEFFMSSVK
  D39             NVPDFTALDHHLKLVQVGTQTVFEQTPVELAEQGVVFTDFHSALEEIPELIEEFFMSSVK
  D39V            NVPDFTALDHHLKLVQVGTQTVFEQTPVELAEQGVVFTDFHSALEEIPELIEEFFMSSVK
  Hungary19A-6    NVPDFTALDHHLKLVQVGTQTVFEQTPVELAEQGVVFTDFHSALEEIPELIEEFFMSSVK
  EF3030          NVPDFTALDHHLKLVQVGTQTVFEQTPVELAEQGVVFTDFHSALEEIPELIEEFFMSSVK
                  ************************************************************
  
  TIGR4           YDDDKLAAYHTAYFNSGAVLYIPDNVEITEPIEGIFYQDSDSNVPFNKHIMIIVGKNSKI
  D39             YDDDKLAAYHTAYFNSGAVLYIPDNVEITEPIEGIFYQDSDSNVPFNKHIMIIAGKNSKI
  D39V            YDDDKLAAYHTAYFNSGAVLYIPDNVEITEPIEGIFYQDSDSNVPFNKHIMIIAGKNSKI
  Hungary19A-6    YDDDKLAAYHTAYFNSGAVLYIPDNVEITEPIEGIFYQDSDSNVPFNKHIMIIAGKNSKI
  EF3030          YDDDKLAAYHTAYFNSGAVLYIPDNVEITEPIEGIFYQDSDSNVPFNKHIMIIAGKNSKI
                  *****************************************************.******
  
  TIGR4           SYLERLESRGEGSDKATANITVEVIARSGAQVKFAAIDRLGENVTAYISRRGKLGNDASI
  D39             SYLERLESRGEGSDKATANITVEVIARSGAQVKFAAIDRLGENVTAYISRRGKLGNDASI
  D39V            SYLERLESRGEGSDKATANITVEVIARSGAQVKFAAIDRLGENVTAYISRRGKLGNDASI
  Hungary19A-6    SYLERLESRGEGSDKVTANITVEVIARSGAQVKFAAIDRLGENVTAYISRRGKLGNDASI
  EF3030          SYLERLESRGEGSDKATANITVEVIARSGAQVKFAAIDRLGENVTAYISRRGKLGNDASI
                  ***************.********************************************
  
  TIGR4           DWAIGVMNEGNVVADFDSDLIGNGSHADLKVVALSSGRQVQGIDTRVTNYGCNSIGNILQ
  D39             DWAIGVMNEGNVVADFDSDLIGNGSHADLKVVALSSGRQVQGIDTRVTNYGCNSIGNILQ
  D39V            DWAIGVMNEGNVVADFDSDLIGNGSHADLKVVALSSGRQVQGIDTRVTNYGCNSIGNILQ
  Hungary19A-6    DWAIGVMNEGNVVADFDSDLIGNGSHADLKVVALSSGRQVQGIDTRVTNYGCNSIGNILQ
  EF3030          DWAIGVMNEGNVVADFDSDLLGNGSHADLKVVALSSGRQVQGIDTRVTNYGCNSIGNILQ
                  ********************:***************************************
  
  TIGR4           HGVILEKATLTFNGIGHIIKGAKGADAQQESRVLMLSDQARSDANPILLIDENDVTAGHA
  D39             HGVILEKATLTFNGIGHIIKGAKGADAQQESRVLMLSDQARSDANPILLIDENDVTAGHA
  D39V            HGVILEKATLTFNGIGHIIKGAKGADAQQESRVLMLSDQARSDANPILLIDENDVTAGHA
  Hungary19A-6    HGVILEKATLTFNGIGHIIKGAKGADAQQESRVLMLSDQARSDANPILLIDENDVTAGHA
  EF3030          HGVILEKATLTFNGIGHIIKGAKGADAQQESRVLMLSDQARSDANPILLIDENDVTAGHA
                  ************************************************************
  
  TIGR4           ASIGQVDPEDMYYLMSRGLDKATAERLVVRGFLGSVIVEIPVKEVRDEMIATIEEKLSKR
  D39             ASIGQVDPEDMYYLMSRGLDKATAERLVVRGFLGSVIVEIPVKEVRDEMIATIEEKLSKR
  D39V            ASIGQVDPEDMYYLMSRGLDKATAERLVVRGFLGSVIVEIPVKEVRDEMIATIEEKLSKR
  Hungary19A-6    ASIGQVDPEDMYYLMSRGLDKATAERLVVRGFLGSVIVEIPVKEVRDEMIATIEEKLSKR
  EF3030          ASIGQVDPEDMYYLMSRGLDKATAERLVVRGFLGSVIVEIPVKEVRDEMIATIEEKLSKR
                  ************************************************************