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PangenomeTIGR4
serotype 4
D39serotype 2
D39Vserotype 2
Hungary19A-6serotype 19A
EF3030serotype 19F
670-6Bserotype 6B
6A-10serotype 6A
70585serotype 5
A026serotype 19F
A66serotype 3
AP200serotype 11A
ASP0581serotype 12F
ATCC 49619serotype 19F
ATCC 700669serotype 23F
BVJ1JLserotype 1
CGSP14serotype 14
G54serotype 19F
HU-OHserotype 3
Hu15serotype 19A
Hu17serotype 19A
INV104serotype 1
INV200serotype 14
JJAserotype 14
MDRSPN001serotype 19F
NCTC7466serotype 2
NU83127serotype 4
OXC141serotype 3
P1031serotype 1
R6serotype 2
SP49serotype 19A
SPN032672serotype 1
SPN034156serotype 3
SPN034183serotype 3
SPN994038serotype 3
SPN994039serotype 3
SPNA45serotype 3
ST556serotype 19F
TCH8431/19Aserotype 19A
Taiwan19F-14serotype 19F
Xen35serotype 4
gamPNI0373serotype 1
⊟Summary[edit | edit source]
- pan ID?: PNEUPAN001848000
- symbol?: sarA_2
- synonym:
- description?: peptide ABC transporter substrate-binding protein
- peptide ABC transporter substrate-binding protein
- putative extracellular oligopeptide-binding protein
- conserved hypothetical protein
- Oligopeptide-binding protein SarA
- extracellular oligopeptide-binding protein
- ABC transporter substrate-binding protein - oligopeptid transport
- ABC transporter substrate-binding protein - oligopeptid transport, internal deletion
- ABC-type oligopeptide transport system, periplasmic component
- Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA (TC 3.A.1.5.1)
- Oligopeptide ABC transporter substrate-binding protein
- peptide-binding protein
descriptions from strain specific annotations:
- strand?: +
- coordinates?: 2201082..2201786
- occurrence?: in 100% of 41 strains
⊟Orthologs[edit | edit source]
⊟Genome Viewer[edit | edit source]
| TIGR4 | |
| D39 | |
| D39V | |
| Hungary19A-6 | |
| EF3030 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.505)
TIGR4 MLDVEAIRKDFPILDQIVNDEPLVYLDNAATTQKPLVVLKAINSYYEQDNANVHRGVHTL
D39 MLDVEAIRKDFPILDQIVNDEPLVYLDNAATTQKPLVVLKAINSYYEQDNANVHRGVHTL
D39V MLDVEAIRKDFPILDQIVNDEPLVYLDNAATTQKPLVVLKAINSYYEQDNANVHRGVHTL
Hungary19A-6 MLDVEAIRKDFPILDQIVNDEPLVYLDNAATTQKPLVVLKAINSYYEQDNANVHRGVHTL
EF3030 MLDVEAIRKDFPILDQIVNDEPLVYLDNAATTQKPLVVLKAINSYYEQDNANVHRGVHTL
************************************************************
TIGR4 AERATASYEAARETIRKFINAGSTKEVLFTRGTTTSLNWVARFAEEILTEGDQVLISVME
D39 AERATASYEAARETIRKFINAGSTKEVLFTRGTTTSLNWVARFAEEILTEGDQVLISVME
D39V AERATASYEAARETIRKFINAGSTKEVLFTRGTTTSLNWVARFAEEILTEGDQVLISVME
Hungary19A-6 AERATASYEAARETIRKFINAGSTKEVLFTRGTTTSLNWVARFAEEILAEGDRVLISVME
EF3030 AERATASYEAARETIRKFINAGSTKEVLFTRGTTTSLNWVARFAEEILTEGDQVLISVME
************************************************:***:*******
TIGR4 HHSNIIPWQEACRKTGAELVYVYLKDGALDMEDLRAKLTDKVKFVSLAHASNVLGVVNPI
D39 HHSNIIPWQEACRKTGAELVYVYLKDGALDMEGLRAKLTDKVKFVSLAHASNVLGVVNPI
D39V HHSNIIPWQEACRKTGAELVYVYLKDGALDMEGLRAKLTDKVKFVSLAHASNVLGVVNPI
Hungary19A-6 HHSNIIPWQEACRKTGAELVYVYLKDGALDMEDLRAKLTDKVKFVSLAHASNVLGVVNPI
EF3030 HHSNIIPWQEACRKTGAELVYVYLKDGALDMEDLRAKLTDKVKFVSLAHASNVLGVVNPI
********************************.***************************
TIGR4 KEITQLAHQVGAIMVVDGAQSTPHMKIDVQDLDLDFFAFSGHKMAGPTGIGVLYGKEKYL
D39 KEITQLAHQVGAIMVVDGAQSTPHMKIDVQDLDLDFFAFSAHKMAGPTGIGVLYGKEKYL
D39V KEITQLAHQVGAIMVVDGAQSTPHMKIDVQDLDLDFFAFSAHKMAGPTGIGVLYGKEKYL
Hungary19A-6 KEITQLAHQVGAIMVVDGAQSTPHMKIDVQDLDLDFFAFSGHKMAGPTGIGVLYGKEKYL
EF3030 KEITQLAHQVGAIMVVDGAQSTPHMKIDVQDLDLDFFAFSGHKMAGPTGIGVLYGKEKYL
****************************************.*******************
TIGR4 EQMSPVEFGGEMIDFVYEQFASWKELPWKFEAGTPNMAGAIGLATAVDYLEKIGMDAVEA
D39 EQMSPVEFGGEMIDFVYEQSASWKELPWKFEAGTPNMAGAIGLATAVDYLEKIGMDAIEA
D39V EQMSPVEFGGEMIDFVYEQSASWKELPWKFEAGTPNMAGAIGLATAVDYLEKIGMDAIEA
Hungary19A-6 EQMSPVEFGGEMIDFVYEQFASWKELPWKFEAGTPNMAGAIGLATAVDYLEKIGMDAVEA
EF3030 EQMSPVEFGGEMIDFVYEQSASWKELPWKFEAGTPNMAGAIGLATAVDYLEKIGMDAVEA
******************* *************************************:**
TIGR4 HEQELIAYVYPKLQAIEGLTIYGSQDLAQRSGVIAFNLGDLHPHDLATALDYEGVAVRAG
D39 HEQELIAYVYPKLQAIEGLTIYGSQDLAQRSGVIAFNLGDLHPHDLATALDYEGVAVRAG
D39V HEQELIAYVYPKLQAIERLTIYGSQDLAQRSGVIAFNLGDLHPHDLATALDYEGVAVRAG
Hungary19A-6 HEQELIAYVYPKLQAIEGLTIYGSQDLAQRSGVIAFNLGDLHPHDLATALDYEGVAVRAG
EF3030 HEQELIAYVYPKLQAIEGLTIYGSQDLAQRSGVIAFNLGDLHPHDLATALDYEGVAVRAG
***************** ******************************************
TIGR4 HHCAQPLLQYLEVPATARASFYIYNTKADCDKLVDALQKTKEFFNGTF
D39 HHCAQPLLQYLEVPATARASFYIYNTKADCDKLVDALQKTKEFFNGTF
D39V HHCAQPLLQYLEVPATARASFYIYNTKADCDKLVDALQKTKEFFNGTF
Hungary19A-6 HHCAQPLLQYLEVPATARASFYIYNTKADCDKLVDALQKTKEFFNGTF
EF3030 HHCAQPLLQYLEVPATARASFYIYNTKADCDKLVDALQKTKEFFNGTF
************************************************