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PangenomeTIGR4
serotype 4
D39serotype 2
D39Vserotype 2
Hungary19A-6serotype 19A
EF3030serotype 19F
670-6Bserotype 6B
6A-10serotype 6A
70585serotype 5
A026serotype 19F
A66serotype 3
AP200serotype 11A
ASP0581serotype 12F
ATCC 49619serotype 19F
ATCC 700669serotype 23F
BVJ1JLserotype 1
CGSP14serotype 14
G54serotype 19F
HU-OHserotype 3
Hu15serotype 19A
Hu17serotype 19A
INV104serotype 1
INV200serotype 14
JJAserotype 14
MDRSPN001serotype 19F
NCTC7466serotype 2
NU83127serotype 4
OXC141serotype 3
P1031serotype 1
R6serotype 2
SP49serotype 19A
SPN032672serotype 1
SPN034156serotype 3
SPN034183serotype 3
SPN994038serotype 3
SPN994039serotype 3
SPNA45serotype 3
ST556serotype 19F
TCH8431/19Aserotype 19A
Taiwan19F-14serotype 19F
Xen35serotype 4
gamPNI0373serotype 1
⊟Summary[edit | edit source]
- pan ID?: PNEUPAN001905000
- symbol?: dnaE
- synonym:
- description?: DNA polymerase III subunit alpha
- DNA polymerase III subunit alpha
- DNA polymerase III alpha subunit
- DNA polymerase III, alpha subunit
- DNA-polymerase III alpha-chain
- DNA-directed DNA polymerase
- DNA polymerase III DnaE
- Error-prone DNA polymerase
descriptions from strain specific annotations:
- strand?: +
- coordinates?: 2279754..2282855
- occurrence?: in 100% of 41 strains
⊟Orthologs[edit | edit source]
⊟Genome Viewer[edit | edit source]
| TIGR4 | |
| D39 | |
| D39V | |
| Hungary19A-6 | |
| EF3030 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.505)
TIGR4 MTAFQQLPSSVLQTGAIFLSIIIEALPFVLIGSIVSGLIEVYITPDKVYHFLPRNRWGRI
D39 MTAFQQLPSSVLQTGAIFLSIIIEALPFVLIGGIVSGLIEVYITPDKVYHFLPRNRWGRI
D39V MTAFQQLPSSVLQTGAIFLSIIIEALPFVLIGGIVSGLIEVYITPDKVYHFLPRNRWGRI
Hungary19A-6 MTAFQQLPSSVLQTGAIFLSIIIEALPFVLIGSIVSGLIEVYITPDKVYHFLPRNRWGRI
EF3030 MTAFQQLPSSVLQTGAIFLSIIIEALPFVLIGSIVSGLIEVYITPDKVYHFLPRNRWGRI
********************************.***************************
TIGR4 FFGTFVGILFPSCECGIVPIINRFLEKKVPSYTAVPFLVTAPVINPIVLFATYSAFGNSF
D39 FFGTFVGILFPSCECGIVPIINRFLEKKVPSYTAVPFLVTAPVINPIVLFATYSAFGNSF
D39V FFGTFVGILFPSCECGIVPIINRFLEKKVPSYTAVPFLVTAPVINPIVLFATYSAFGNSF
Hungary19A-6 FFGTFVGILFPSCECGIVPIINRFLEKKVPSYTAVPFLVTAPVINPIVLFATYSAFGNSF
EF3030 FFGTFVGILFPSCECGIVPIINRFLEKKVPSYTAVPFLVTAPVINPIVLFATYSAFGNSF
************************************************************
TIGR4 HVALLRALGSILVAVILGIFLGFFWQEPIQKENRLACHEHDFSYLSSAKKVFQVFVQAID
D39 HVALLRALGSILVAVILGIFLGFFWQEPIQKENRLACHEHDFSYLSSAKKVFQVFVQAID
D39V HVALLRALGSILVAVILGIFLGFFWQEPIQKENRLACHEHDFSYLSSAKKVFQVFVQAID
Hungary19A-6 HVALLRALGSILVAVILGIFLGFFWQEPIQKENRLACHEHDFSYLSSAKKVFQVFVQAID
EF3030 HVALLRALGSILVAVILGIFLGFFWQEPIQKENRLACHEHDFSYLSSAKKVFQVFVQAID
************************************************************
TIGR4 EFFDTGRYLVFGCLFASIIQVYVPTRILTSISATPLFAILLLMILAFLLSLCSEADAFIG
D39 EFFDTGRYLVFGCLFASIIQVYVPTRILTSISATPLFAILLLMLLAFLLSLCSEADAFIG
D39V EFFDTGRYLVFGCLFASIIQVYVPTRILTSISATPLFAILLLMLLAFLLSLCSEADAFIG
Hungary19A-6 EFFDTGRYLVFGCLFASIIQVYVPTRILTSISATPLFAILLLMLLAFLLSLCSEADAFIG
EF3030 EFFDTGRYLVFGCLFASIIQVYVPTRILTSISATPLFAILLLMILAFLLSLCSEADAFIG
*******************************************:****************
TIGR4 ASLLSSFGLAPVLAFLVIGPMLDIKNILMMKNYLKARFISHFITIVTLVVLVYSLLIGVI
D39 ASLLSSFGLAPVLAFLVIGPMLDIKNILMMKNYLKARFISHFITIVTLVVLAYSLLIGVI
D39V ASLLSSFGLAPVLAFLVIGPMLDIKNILMMKNYLKARFISHFITIVTLVVLAYSLLIGVI
Hungary19A-6 ASLLSSFGLAPVLAFLVIGPMLDIKNILMMKNYLKARFISHFITIVTLVVLAYSLLIGVI
EF3030 ASLLSSFGLAPVLAFLVIGPMLDIKNILMMKNYLKARFISHFITIVTLVVLVYSLLIGVI
***************************************************.********
TIGR4 L
D39 L
D39V L
Hungary19A-6 L
EF3030 L
*