PangenomeTIGR4

serotype 4

D39

serotype 2

D39V

serotype 2

Hungary19A-6

serotype 19A

EF3030

serotype 19F

670-6B

serotype 6B

6A-10

serotype 6A

70585

serotype 5

A026

serotype 19F

A66

serotype 3

AP200

serotype 11A

ASP0581

serotype 12F

ATCC 49619

serotype 19F

ATCC 700669

serotype 23F

BVJ1JL

serotype 1

CGSP14

serotype 14

G54

serotype 19F

HU-OH

serotype 3

Hu15

serotype 19A

Hu17

serotype 19A

INV104

serotype 1

INV200

serotype 14

JJA

serotype 14

MDRSPN001

serotype 19F

NCTC7466

serotype 2

NU83127

serotype 4

OXC141

serotype 3

P1031

serotype 1

R6

serotype 2

SP49

serotype 19A

SPN032672

serotype 1

SPN034156

serotype 3

SPN034183

serotype 3

SPN994038

serotype 3

SPN994039

serotype 3

SPNA45

serotype 3

ST556

serotype 19F

TCH8431/19A

serotype 19A

Taiwan19F-14

serotype 19F

Xen35

serotype 4

gamPNI0373

serotype 1

⊟Summary

• pan ID^?: PNEUPAN001957000
• symbol^?: tmk
• synonym:
• description^?: dTMPkinase

  descriptions from strain specific annotations:

  • dTMPkinase
  • thymidylate kinase
• strand^?: +
• coordinates^?: 2326784..2327422
• occurrence^?: in 100% of 41 strains

⊟Orthologs

TIGR4:
SP_RS04620 (tmk)
D39:
SPD_RS04430 (tmk)
D39V:
SPV_RS04420 (tmk)
Hungary19A-6:
SPH_RS05050 (tmk)
EF3030:
EF3030_RS04480 (tmk)
670-6B:
SP670_RS06870 (tmk)
6A-10:
HKM25_RS04410 (tmk)
70585:
SP70585_RS04835 (tmk)
A026:
T308_RS06015 (tmk)
A66:
A66_RS04235 (tmk)
AP200:
SPAP_RS04795 (tmk)
ASP0581:
EL334_RS04660 (tmk)
ATCC 49619:
EL263_RS04640 (tmk)
ATCC 700669:
SPN23F_RS04370 (tmk)
BVJ1JL:
JN057_RS04480 (tmk)
CGSP14:
SPCG_RS04725 (tmk)
G54:
SPG_RS04340 (tmk)
gamPNI0373:
HMPREF1038_RS04695 (tmk)
HU-OH:
EL271_RS04370 (tmk)
Hu15:
SPNHU15_RS04595 (tmk)
Hu17:
SPNHU17_RS04530 (tmk)
INV104:
INV104_RS04690 (tmk)
INV200:
SPNINV200_RS04605 (tmk)
JJA:
SPJ_RS04375 (tmk)
MDRSPN001:
MDRSPN_RS05570 (tmk)
NCTC7466:
DQM66_RS04430 (tmk)
NU83127:
EL277_RS04710 (tmk)
OXC141:
SPNOXC_RS04545 (tmk)
P1031:
SPP_RS04640 (tmk)
R6:
SPR_RS04190 (tmk)
SP49:
BMJ42_RS05250 (tmk)
SPN032672:
SPN032672_RS10950 (tmk)
SPN034156:
SPN034156_RS10465 (tmk)
SPN034183:
SPN034183_RS04560 (tmk)
SPN994038:
SPN994038_RS04470 (tmk)
SPN994039:
SPN994039_RS04475 (tmk)
SPNA45:
SPNA45_RS06985 (tmk)
ST556:
MYY_RS06480 (tmk)
Taiwan19F-14:
SPT_RS06275 (tmk)
TCH8431/19A:
HMPREF0837_RS07430 (tmk)
Xen35:
CXP32_RS04660 (tmk)

⊟Genome Viewer

TIGR4
D39
D39V
Hungary19A-6
EF3030

⊟Alignments

• alignment of orthologues:
  CLUSTAL format alignment by MAFFT L-INS-i (v7.505)
  
  
  TIGR4           MSQSYINVIGAGLAGSEAAYQIAERGIPVKLYEMRGVKSTPQHKTDNFAELVCSNSLRGD
  D39             MSQSYINVIGAGLAGSEAAYQIAERGIPVKLYEMRGVKSTPQHKTDNFAELVCSNSLRGD
  D39V            MSQSYINVIGAGLAGSEAAYQIAERGIPVKLYEMRGVKSTPQHKTDNFAELVCSNSLRGD
  Hungary19A-6    MSQSYINVIGAGLAGSEAAYQIAERGIPVKLYEMRGVKSTPQHKTDNFAELVCSNSLRGD
  EF3030          MSQSYINVIGAGLAGSEAAYQIAERGIPVKLYEMRGVKSTPQHKTDNFAELVCSNSLRGD
                  ************************************************************
  
  TIGR4           ALTNAVGLLKEEMRRLGSVILESAEATRVPAGGALAVDRDGFSQMVTEKVANHPLIEVVR
  D39             ALTNAVGLLKEEMRRLGSVILESAEATRVPAGGALAVDRDGFSQMVTEKVANHPLIEVVR
  D39V            ALTNAVGLLKEEMRRLGSVILESAEATRVPAGGALAVDRDGFSQMVTEKVANHPLIEVVR
  Hungary19A-6    ALTNAVGLLKEEMRRLGSVILESAEATRVPAGGALAVDRDGFSQMVTEKVANHPLIEVVR
  EF3030          ALTNAVGLLKEEMRRLGSVILESAEATRVPAGGALAVDRDGFSQMVTEKVANHPLIEVVR
                  ************************************************************
  
  TIGR4           DEITELPTDVITVIATGPLTSDALAEKIHALNDGAGFYFYDAAAPIIDVNTIDMSKVYLK
  D39             DEITELPTDVITVIATGPLTSDALAEKIHALNDGDGFYFYDAAAPIIDVNTIDMSKVYLK
  D39V            DEITELPTDVITVIATGPLTSDALAEKIHALNDGDGFYFYDAAAPIIDVNTIDMSKVYLK
  Hungary19A-6    DEITELPTDVITVIATGPLTSDALAEKIHALNDGDGFYFYDAAAPIIDVNTIDMSKVYLK
  EF3030          DEITELPTDVITVIATGPLTSDALAEKIHALNDGAGFYFYDAAAPIIDVNTIDMSKVYLK
                  ********************************** *************************
  
  TIGR4           SRYDKGEAAYLNAPMTKQEFMDFHEALVNAEEAPLSSFEKEKYFEGCMPIEVMAKRGIKT
  D39             SRYDKGEAAYLNAPMTKQEFMDFHEALVNAEEAPLNSFEKEKYFEGCMPIEVMAKRGIKT
  D39V            SRYDKGEAAYLNAPMTKQEFMDFHEALVNAEEAPLNSFEKEKYFEGCMPIEVMAKRGIKT
  Hungary19A-6    SRYDKGEAAYLNAPMTKQEFMDFHEALVNAEEAPLNSFEKEKYFEGCMPIEVMAKRGIKT
  EF3030          SRYDKGEAAYLNAPMTKQEFMDFHEALVNAEEAPLSSFEKEKYFEGCMPIEVMAKRGIKT
                  ***********************************.************************
  
  TIGR4           MLYGPMKPVGLEYPDDYTGPRDGEFKTPYAVVQLRQDNAAGSLYNIVGFQTHLKWGEQKR
  D39             MLYGPMKPVGLEYPDDYTGPRDGEFKTPYAVVQLRQDNAAGSLYNIVGFQTHLKWGEQKR
  D39V            MLYGPMKPVGLEYPDDYTGPRDGEFKTPYAVVQLRQDNAAGSLYNIVGFQTHLKWGEQKR
  Hungary19A-6    MLYGPMKPVGLEYPDDYTGPRDGEFKTPYAVVQLRQDNAAGSLYNIVGFQTHLKWGEQKR
  EF3030          MLYGPMKPVGLEYPDDYTGPRDGEFKTPYAVVQLRQDNAAGSLYNIVGFQTHLKWGEQKR
                  ************************************************************
  
  TIGR4           VFQMIPGLENAEFVRYGVMHRNSYMDSPNLLEQTYRSKKQPNLFFAGQMTGVEGYVESAA
  D39             VFQMIPGLENAEFVRYGVMHRNSYMDSPNLLEQTYRSKKQPNLFFAGQMTGVEGYVESAA
  D39V            VFQMIPGLENAEFVRYGVMHRNSYMDSPNLLEQTYRSKKQPNLFFAGQMTGVEGYVESAA
  Hungary19A-6    VFQMIPGLENAEFVRYGVMHRNSYMDSPNLLEQTYRSKKQPNLFFAGQMTGVEGYVESAA
  EF3030          VFQMIPGLENAEFVRYGVMHRNSYMDSPNLLEQTYRSKKQPNLFFAGQMTGVEGYVESAA
                  ************************************************************
  
  TIGR4           SGLVAGINAARLFKEESEAIFPETTAIGSLAHYITHADSKHFQPMNVNFGIIKELEGERI
  D39             SGLVAGINAARLFKEESEVIFPETTAIGSLAHYITHADSKHFQPMNVNFGIIKELEGERI
  D39V            SGLVAGINAARLFKEESEVIFPETTAIGSLAHYITHADSKHFQPMNVNFGIIKELEGERI
  Hungary19A-6    SGLVAGINAARLFKEESEVIFPETTAIGSLAHYITHADSKHFQPMNVNFGIIKELEGERI
  EF3030          SGLVAGINAARLFKEESEAIFPETTAIGSLAHYITHADSKHFQPMNVNFGIIKELEGERI
                  ******************.*****************************************
  
  TIGR4           RDKKARYEKIAERALADLEEFLTV
  D39             RDKKARYEKIAERALADLEEFLTV
  D39V            RDKKARYEKIAERALADLEEFLTV
  Hungary19A-6    RDKKARYEKIAERALADLEEFLTV
  EF3030          RDKKARYEKIAERALADLEEFLTV
                  ************************