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PangenomeTIGR4
serotype 4
D39serotype 2
D39Vserotype 2
Hungary19A-6serotype 19A
EF3030serotype 19F
670-6Bserotype 6B
6A-10serotype 6A
70585serotype 5
A026serotype 19F
A66serotype 3
AP200serotype 11A
ASP0581serotype 12F
ATCC 49619serotype 19F
ATCC 700669serotype 23F
BVJ1JLserotype 1
CGSP14serotype 14
G54serotype 19F
HU-OHserotype 3
Hu15serotype 19A
Hu17serotype 19A
INV104serotype 1
INV200serotype 14
JJAserotype 14
MDRSPN001serotype 19F
NCTC7466serotype 2
NU83127serotype 4
OXC141serotype 3
P1031serotype 1
R6serotype 2
SP49serotype 19A
SPN032672serotype 1
SPN034156serotype 3
SPN034183serotype 3
SPN994038serotype 3
SPN994039serotype 3
SPNA45serotype 3
ST556serotype 19F
TCH8431/19Aserotype 19A
Taiwan19F-14serotype 19F
Xen35serotype 4
gamPNI0373serotype 1
⊟Summary[edit | edit source]
- pan ID?: PNEUPAN001971000
- symbol?: comEA
- synonym: celA
- description?: helix-hairpin-helix domain-containing protein
- helix-hairpin-helix domain-containing protein
- ComEA family DNA-binding protein
- Competence protein
- competence protein CelA
- putative competence protein
- ComE operon protein 1
- comEA family protein
- comEA protein
- competence protein (ComEA)
- DNA uptake protein-like DNA-binding protein
- Late competence DNA receptor ComEA
- Late competence protein ComEA, DNA receptor
descriptions from strain specific annotations:
- strand?: +
- coordinates?: 2348105..2348755
- occurrence?: in 100% of 41 strains
⊟Orthologs[edit | edit source]
⊟Genome Viewer[edit | edit source]
| TIGR4 | |
| D39 | |
| D39V | |
| Hungary19A-6 | |
| EF3030 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.505)
TIGR4 MEAIIEKIKEYKIIVICTGLGLLVGGFFLLKPAPQTPVKETNLQAEVAAVSKDSSTEKEV
D39 MEAIIEKIKEYKIIVICTGLGLLVGGFFLLKPAPQTPVKETNLQAEVAAVSKDLVSEKEV
D39V MEAIIEKIKEYKIIVICTGLGLLVGGFFLLKPAPQTPVKETNLQAEVAAVSKDLVSEKEV
Hungary19A-6 MEAIIEKIKEYKIIVICTGLGLLVGGFFLLKPAPQTPVKETNLQAEVAAVSKDLVSEKEV
EF3030 MEAIIEKIKEYKIIVICTGLGLLVGGFFLLKSAPQTPVKETNLQAEVAAVSKDSSTEKEV
*******************************.********************* :****
TIGR4 KKEEKEEPLEQDLITVDVKGAVKSPGIYDLPVGSRVNDAVQKAGGLTEQADSKSLNLAQK
D39 NKEEKEEPLEQDLITVDVKGAVKSPGIYDLPVGSRVNDAVQKAGGLTEQADSKSLNLAQK
D39V NKEEKEEPLEQDLITVDVKGAVKSPGIYDLPVGSRVNDAVQKAGGLTEQADSKSLNLAQK
Hungary19A-6 NKEEKEEPVEQDLITVDVKGAVKSPGIYDLPVGSRVNDAVQKAGGLTEQADSKSLNLAQK
EF3030 KKEEKEEPLEQDLITVDVKGAVKSPGIYDLPVGSRVNDAVQKAGGLTEQADSKSLNLAQK
:*******:***************************************************
TIGR4 VSDEALVYVPTKGEEAVSQQTGSGTASSTSKEKKVNLNKASLEELKQVKGLGGKRAQDII
D39 VSDEALVYVPTKGEEAVSQQTGLGTASSISKEKKVNLNKASLEELKQVKGLGGKRAQDII
D39V VSDEALVYVPTKGEEAVSQQTGLGTASSISKEKKVNLNKASLEELKQVKGLGGKRAQDII
Hungary19A-6 VSDEALVYVPTKGEEAVSQQTGSGTASSISKEKKVNLNKASLEELKQVKGLGGKRAQDII
EF3030 VSDEALVYVPTKGEEAVSQQTGSGTASSTSKEKKVNLNKASLEELKQVKGLGGKRAQDII
********************** ***** *******************************
TIGR4 DHREANGKFKSVDELKKVSGIGGKTIEKLKDYVTVD
D39 DHREANGKFKSVDELKKVSGIGGKTIEKLKDYVTVD
D39V DHREANGKFKSVDELKKVSGIGGKTIEKLKDYVTVD
Hungary19A-6 DHREANGKFKSVDELKKVSGIGGKTIEKLKDYVTVD
EF3030 DHREANGKFKSVDELKKVSGIGGKTIEKLKDYVTVD
************************************