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PangenomeTIGR4
serotype 4
D39serotype 2
D39Vserotype 2
Hungary19A-6serotype 19A
EF3030serotype 19F
670-6Bserotype 6B
6A-10serotype 6A
70585serotype 5
A026serotype 19F
A66serotype 3
AP200serotype 11A
ASP0581serotype 12F
ATCC 49619serotype 19F
ATCC 700669serotype 23F
BM6001serotype 19F
BVJ1JLserotype 1
CGSP14serotype 14
G54serotype 19F
HU-OHserotype 3
Hu15serotype 19A
Hu17serotype 19A
INV104serotype 1
INV200serotype 14
JJAserotype 14
MDRSPN001serotype 19F
NCTC7465serotype 1
NCTC7466serotype 2
NU83127serotype 4
OXC141serotype 3
P1031serotype 1
R6serotype 2
SP49serotype 19A
SPN032672serotype 1
SPN034156serotype 3
SPN034183serotype 3
SPN994038serotype 3
SPN994039serotype 3
SPNA45serotype 3
ST556serotype 19F
TCH8431/19Aserotype 19A
Taiwan19F-14serotype 19F
Xen35serotype 4
gamPNI0373serotype 1
⊟Summary[edit | edit source]
- pan ID?: PNEUPAN001987000
- symbol?: —
- synonym:
- description?: GH25 family lysozyme
- GH25 family lysozyme
- glycosyl hydrolase
- lyzozyme M1
- glycosyl hydrolase family 25
- lysozyme
- Lyzozyme M1 (1,4-beta-N-acetylmuramidase)
- 1,4-beta-N-acetylmuramidase, lyzozyme M1
- glycoside hydrolase family 25 protein
- glycosyl hydrolase 25 family protein
- glycosyl hydrolases 25 family protein
- Phage lysin, glycosyl hydrolase, family 25
descriptions from strain specific annotations:
- strand?: -
- coordinates?: 2453354..2454154
- occurrence?: in 100% of 43 strains
⊟Orthologs[edit | edit source]
⊟Genome Viewer[edit | edit source]
| TIGR4 | |
| D39 | |
| D39V | |
| Hungary19A-6 | |
| EF3030 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.505)
TIGR4 MRKQIHPLILFSFFGIMMFILIINRPLNDSQSFKTKSNIAQIEAQALKHLDKPIIDLSGW
D39 MRKQIHPLILFSFFGIMMFILIINRPLNDSQSFKTKSNIAQIEAQALKHLDKPIIDLSGW
D39V MRKQIHPLILFSFFGIMMFILIINRPLNDSQSFKTKSNIAQIEAQALKHLDKPIIDLSGW
Hungary19A-6 MRKQIHPLILFSFLGIMMFILIINRPLNDSQSFKTKSNIAQIEAQALKHLDKPIIDLSGW
EF3030 MRKQIHPLILFSFFGIMMFILIINRPLNDSQSFKTKSNIAQIEAQALKHLDKPIIDLSGW
*************:**********************************************
TIGR4 QRPEEINYDALSQNISGAIVRVHSGAQTTKENDASFINGIDKAYKSHITELQKRNVPVAV
D39 QRPEEINYDALSQNISGAIVRVHSGTQTTKENDASFINGIDKAYKSHITELQKRNVPVAV
D39V QRPEEINYDALSQNISGAIVRVHSGTQTTKENDASFINGIDKAYKSHITELQKRNVPVAV
Hungary19A-6 QRPEEINYDALSQNISGAIVRVHSGAQTTKENDASFINGIDKAYKSHITELQKRNVPVAV
EF3030 QRPEEINYDALSQNISGAIVRVHSGAQTTKENDASFINGIDKAYKSHITELQKRNVPVAV
*************************:**********************************
TIGR4 YAYVAGKSVQEMEKAAEVFYNAASPYSPSYYWLDVEDKTMSNMNEGVENFRAKLASLGAK
D39 YAYVAGKSVQEMEKAAEVFYNAASPYSPSYYWLDVEDKTMSNMNEGVENFRAKLASLGAK
D39V YAYVAGKSVQEMEKAAEVFYNAASPYSPSYYWLDVEDKTMSNMNEGVENFRAKLASLGAK
Hungary19A-6 YAYVAGKSAQEMEKAAEVFYNAASPYSPSYYWLDVEDKTMSNMNEGVENFRAKLASLGAK
EF3030 YAYVAGKSAQEMEKAAEVFYNAASPYSPSYYWLDVEDKTMSNMNEGVENFRAKLASLGAK
********.***************************************************
TIGR4 NIGIYVGVYFMEEHSIDTGKFTSVWIPSYGSDSGFLESSPKTDLDYDIHQYTSKGKIAGF
D39 NIGIYVGVYFMEEHSIDTGKFTSVWIPSYGSDSGFLESSPKTDLDYDIHQYTSKGKIAGF
D39V NIGIYVGVYFMEEHSIDTGKFTSVWIPSYGSDSGFLESSPKTDLDYDIHQYTSKGKIAGF
Hungary19A-6 NIGIYVGVYFMEEHSIDTGKFTSVWIPSYGSDSGFLESSPKTDLDYDIHQYTSKGKIAGF
EF3030 NIGIYVGVYFMEEHSIDTGKFTSVWIPSYGSDSGFLESSPKTDLDYDIHQYTSKGKIAGF
************************************************************
TIGR4 DHDLDINVISPLKNKEETFRKLFLKP
D39 DHDLDINVISPLKNKEETFRKLFLKP
D39V DHDLDINVISPLKNKEETFRKLFLKP
Hungary19A-6 DHDLDINVISPLKNKEETFRKLFLKP
EF3030 DHDLDINVISPLKNKEETFRKLFLKP
**************************