PangenomeTIGR4

serotype 4

D39

serotype 2

D39V

serotype 2

Hungary19A-6

serotype 19A

EF3030

serotype 19F

670-6B

serotype 6B

6A-10

serotype 6A

70585

serotype 5

A026

serotype 19F

A66

serotype 3

AP200

serotype 11A

ASP0581

serotype 12F

ATCC 49619

serotype 19F

ATCC 700669

serotype 23F

BM6001

serotype 19F

BVJ1JL

serotype 1

CGSP14

serotype 14

G54

serotype 19F

HU-OH

serotype 3

Hu15

serotype 19A

Hu17

serotype 19A

INV104

serotype 1

INV200

serotype 14

JJA

serotype 14

MDRSPN001

serotype 19F

NCTC7465

serotype 1

NCTC7466

serotype 2

NU83127

serotype 4

OXC141

serotype 3

P1031

serotype 1

R6

serotype 2

SP49

serotype 19A

SPN032672

serotype 1

SPN034156

serotype 3

SPN034183

serotype 3

SPN994038

serotype 3

SPN994039

serotype 3

SPNA45

serotype 3

ST556

serotype 19F

TCH8431/19A

serotype 19A

Taiwan19F-14

serotype 19F

Xen35

serotype 4

gamPNI0373

serotype 1

⊟Summary

• pan ID^?: PNEUPAN002002000
• symbol^?: ccdA2
• synonym:
• description^?: thiol-disulfide oxidoreductase-associated membrane protein CcdA2

  descriptions from strain specific annotations:

  • thiol-disulfide oxidoreductase-associated membrane protein CcdA2
  • cytochrome c-type biogenesis protein CcdA
  • putative cytochrome c-type biogenesis protein
  • cytochrome C biogenesis protein CcdA
  • Cytochrome c-type biogenesis protein
  • Thiol:disulfide interchange protein DsbD
  • Cytochrome c biogenesis protein
  • cytochrome C biogenesis protein transmembrane region
  • Cytochrome c-type biogenesis protein CcdA (DsbD analog)
  • Cytochrome c-type biogenesis protein CcdA-2
  • description family protein
  • pseudogene
• strand^?: +
• coordinates^?: 2467570..2468277
• occurrence^?: in 100% of 43 strains

⊟Orthologs

(4)^?
TIGR4:
SP_RS04955 (ccdA2)
(2)
D39:
SPD_RS04760 (ccdA2)
(2)
D39V:
SPV_RS04750 (ccdA2)
(19A)
Hungary19A-6:
SPH_RS05330 (ccdA2)
(19F)
EF3030:
EF3030_RS04815 (ccdA2)
(6B)^?
670-6B:
SP670_RS06535 (ccdA2)
(6A)
6A-10:
HKM25_RS04735 (ccdA2)
(5)
70585:
SP70585_RS05175 (ccdA2)
(19F)
A026:
T308_RS05695 (ccdA2)
(3)
A66:
A66_RS05305 (ccdA2)
(11A)
AP200:
SPAP_RS05120 (ccdA2)
(12F)
ASP0581:
EL334_RS04990 (ccdA2)
(19F)
ATCC 49619:
EL263_RS04950 (ccdA2)
(23F)
ATCC 700669:
SPN23F_RS04705 (ccdA2)
(19F)
BM6001:
ODS73_RS05135 (ccdA2)
(1)
BVJ1JL:
JN057_RS04790 (ccdA2)
(14)
CGSP14:
SPCG_RS05060 (ccdA2)
(19F)
G54:
SPG_RS04650 (ccdA2)
(1)
gamPNI0373:
HMPREF1038_RS05025 (ccdA2)
(3)
HU-OH:
EL271_RS04680 (ccdA2)
(19A)
Hu15:
SPNHU15_RS04870 (ccdA2)
(19A)
Hu17:
SPNHU17_RS04795 (ccdA2)
(1)
INV104:
INV104_RS05015 (ccdA2)
(14)
INV200:
SPNINV200_RS04910 (ccdA2)
(14)
JJA:
SPJ_RS04700 (ccdA2)
(19F)
MDRSPN001:
MDRSPN_RS05260 (ccdA2)
(1)
NCTC7465:
AT689_RS08825 (ccdA2)
(2)
NCTC7466:
DQM66_RS04760 (ccdA2)
(4)
NU83127:
EL277_RS05030 (ccdA2)
(3)
OXC141:
SPNOXC_RS04870 (ccdA2)
(1)
P1031:
SPP_RS04970 (ccdA2)
(2)
R6:
SPR_RS04515 (ccdA2)
(19A)
SP49:
BMJ42_RS05540 (ccdA2)
(1)
SPN032672:
SPN032672_RS11285 (ccdA2)
(3)
SPN034156:
SPN034156_RS10765 (ccdA2)
(3)
SPN034183:
SPN034183_RS04890 (ccdA2)
(3)
SPN994038:
SPN994038_RS04795 (ccdA2)
(3)
SPN994039:
SPN994039_RS04800 (ccdA2)
(3)
SPNA45:
SPNA45_RS07310 (ccdA2)
(19F)
ST556:
MYY_RS06170 (ccdA2)
(19F)
Taiwan19F-14:
SPT_RS05960 (ccdA2)
(19A)
TCH8431/19A:
HMPREF0837_RS07115 (ccdA2)
(4)
Xen35:
CXP32_RS04990 (ccdA2)

⊟Genome Viewer

TIGR4
D39
D39V
Hungary19A-6
EF3030

⊟Alignments

• alignment of orthologues:
  CLUSTAL format alignment by MAFFT L-INS-i (v7.505)
  
  
  TIGR4           METIVFLISVFLAGVLSFFSPCIFPLLPVYAGILLDDQESAKSFSLFGRKVLWSGLIRTL
  D39             METIVFLISVFLAGVLSFFSPCIFPLLPVYAGILLDDQESAKSFSLFGRKVLWSGLIRTL
  D39V            METIVFLISVFLAGVLSFFSPCIFPLLPVYAGILLDDQESAKSFSLFGRKVLWSGLIRTL
  Hungary19A-6    METIVFLISVFLAGVLSFFSPCIFPLLPVYAGILLDDQESAKSFSLFGRKVLWSGLIRTL
  EF3030          METIVFLISVFLAGVLSFFSPCIFPLLPVYAGILLDDQESAKSFSLFGRKVLWSGLIRTL
                  ************************************************************
  
  TIGR4           CFIAGISLIFFILGFGAGYFGHILYANWFRYGMGAIIIILGLHQMEIFHLKKLEVQKSFT
  D39             CFIAGISLIFFILGFGAGYFGHILYANWFRYVMGAIIIILGLHQMEIFHLKKLEVQKSFT
  D39V            CFIAGISLIFFILGFGAGYFGHILYANWFRYVMGAIIIILGLHQMEIFHLKKLEVQKSFT
  Hungary19A-6    CFIAGISLIFFILGFGAGYFGHILYANWFRYVMGAIIIILGLHQMEIFHLKKLEVQKSFT
  EF3030          CFIAGISLIFFILGFGAGYFGHILYANWFRYGMGAIIIILGLHQMEIFHLKKLEVQKSFT
                  ******************************* ****************************
  
  TIGR4           FKKSDSNRYWSAFLLGITFSFGWTPCIGPVLSSVLALAASGGNGAWQGAIYTLIYTLGMA
  D39             FKKSDSNRYWSAFLLGITFSFGWTPCIGPVLSSVLALAASGGNGAWQGAIYTLIYTLGMA
  D39V            FKKSDSNRYWSAFLLGITFSFGWTPCIGPVLSSVLALAASGGNGAWQGAIYTLIYTLGMA
  Hungary19A-6    FKKSDSNRYWSAFLLGITFSFGWTPCIGPVLSSVLALAASGGNGAWQGAIYTLIYTLGMA
  EF3030          FKKSDSNRYWSAFLLGITFSFGWTPCIGPVLSSVLALAASGGNGAWQGAIYTLIYTLGMA
                  ************************************************************
  
  TIGR4           LPFLVLALASGLVMPYFSKIKRHMMLLKKIGGFLIVLMGILLLLGQVNVLAGIFE
  D39             LPFLVLALASGLVMPYFSKIKRHMMLLKKIGGFLIVLMGILLLLGQVNVLAGIFE
  D39V            LPFLVLALASGLVMPYFSKIKRHMMLLKKIGGFLIVLMGILLLLGQVNVLAGIFE
  Hungary19A-6    LPFLVLALASGLVMPYFSKIKRHMMLLKKIGGFLIVLMGILLLLGQVNVLAGIFE
  EF3030          LPFLVLALASGLVMPYFSKIKRHMMLLKKIGGFLIVLMGILLLLGQVNVLAGIFE
                  *******************************************************