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PangenomeTIGR4
serotype 4
D39serotype 2
D39Vserotype 2
Hungary19A-6serotype 19A
EF3030serotype 19F
670-6Bserotype 6B
6A-10serotype 6A
70585serotype 5
A026serotype 19F
A66serotype 3
AP200serotype 11A
ASP0581serotype 12F
ATCC 49619serotype 19F
ATCC 700669serotype 23F
BM6001serotype 19F
BVJ1JLserotype 1
CGSP14serotype 14
G54serotype 19F
HU-OHserotype 3
Hu15serotype 19A
Hu17serotype 19A
INV104serotype 1
INV200serotype 14
JJAserotype 14
MDRSPN001serotype 19F
NCTC7465serotype 1
NCTC7466serotype 2
NU83127serotype 4
OXC141serotype 3
P1031serotype 1
R6serotype 2
SP49serotype 19A
SPN032672serotype 1
SPN034156serotype 3
SPN034183serotype 3
SPN994038serotype 3
SPN994039serotype 3
SPNA45serotype 3
ST556serotype 19F
TCH8431/19Aserotype 19A
Taiwan19F-14serotype 19F
Xen35serotype 4
gamPNI0373serotype 1
⊟Summary[edit | edit source]
- pan ID?: PNEUPAN002006000
- symbol?: lmb
- synonym: adcAII
- description?: zinc-binding lipoprotein AdcAII
- zinc-binding lipoprotein AdcAII
- laminin binding protein
- zinc-binding lipoprotein AdcA
- adhesion lipoprotein
- adhesion protein
- High-affinity zinc uptake system binding-protein
- Laminin-binding surface protein
- Lipoprotein
- ABC transporter, substrate-binding protein
- ABC-type metal ion transport system, periplasmic component/surface adhesin
- adhesion lipoprotein, putative
- High-affinity zinc uptake system binding-protein ZnuA
descriptions from strain specific annotations:
- strand?: +
- coordinates?: 2475626..2487758
- occurrence?: in 100% of 43 strains
⊟Orthologs[edit | edit source]
(6B)?
670-6B:
SP670_RS06520 (adcAII)
(6A)
6A-10:
HKM25_RS04750 (adcAII)
(5)
70585:
SP70585_RS05190 (adcAII)
(12F)
ASP0581:
EL334_RS05005 (adcAII)
(19F)
ATCC 49619:
EL263_RS04965 (adcAII)
(23F)
ATCC 700669:
SPN23F_RS04720 (adcAII)
(19F)
BM6001:
ODS73_RS05150 (adcAII)
(1)
BVJ1JL:
JN057_RS04805 (adcAII)
(14)
CGSP14:
SPCG_RS05075 (adcAII)
(19F)
G54:
SPG_RS04665 (adcAII)
(1)
gamPNI0373:
HMPREF1038_RS05040 (adcAII)
(3)
HU-OH:
EL271_RS04695 (adcAII)
(19A)
Hu15:
SPNHU15_RS04885 (adcAII)
(19A)
Hu17:
SPNHU17_RS04810 (adcAII)
(1)
INV104:
INV104_RS05030 (adcAII)
(14)
INV200:
SPNINV200_RS04925 (adcAII)
(14)
JJA:
SPJ_RS04715 (adcAII)
(19F)
MDRSPN001:
MDRSPN_RS05245 (adcAII)
(1)
NCTC7465:
AT689_RS08810 (adcAII)
(2)
NCTC7466:
DQM66_RS04775 (adcAII)
(4)
NU83127:
EL277_RS05045 (adcAII)
(19A)
SP49:
BMJ42_RS05555 (adcAII)
(1)
SPN032672:
SPN032672_RS11300 (adcAII)
(3)
SPN034156:
SPN034156_RS10780 (adcAII)
(3)
SPN034183:
SPN034183_RS04905 (adcAII)
(3)
SPN994038:
SPN994038_RS04810 (adcAII)
(3)
SPN994039:
SPN994039_RS04815 (adcAII)
(3)
SPNA45:
SPNA45_RS07325 (adcAII)
(19F)
ST556:
MYY_RS06155 (adcAII)
(19F)
Taiwan19F-14:
SPT_RS05945 (adcAII)
⊟Genome Viewer[edit | edit source]
| TIGR4 | |
| D39 | |
| D39V | |
| Hungary19A-6 | |
| EF3030 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.505)
TIGR4 MKKQNLFLVLLSVFLLCLGACGQKESQTGKGMKIVTSFYPIYAMVKEVSGDLNDVRMIQS
D39 MKKQNLFLVLLSVFLLCLGACGQKESQTGKGMKIVTSFYPIYAMVKEVSGDLNDVRMIQS
D39V MKKQNLFLVLLSVFLLCLGACGQKESQTGKGMKIVTSFYPIYAMVKEVSGDLNDVRMIQS
Hungary19A-6 MKKQNLFLVLLSVFLLCLGACGQKESQTGKGMKIVTSFYPIYAMVKEVSGDLNDVRMIQS
EF3030 MKKQNLFLVLLSVFLLCLGACGQKESQTGKGMKIVTSFYPIYAMVKEVSGDLNDVRMIQS
************************************************************
TIGR4 SSGIHSFEPSANDIAAIYDADVFVYHSHTLESWAGSLDPNLKKSKVKVLEASEGMTLERV
D39 SSGIHSFEPSANDIAAIYDADVFVYHSHTLESWAGSLDPNLKKSKVKVLEASEGMTLERV
D39V SSGIHSFEPSANDIAAIYDADVFVYHSHTLESWAGSLDPNLKKSKVKVLEASEGMTLERV
Hungary19A-6 SSGIHSFEPSANDIAAIYDADVFVYHSHTLESWAGSLDPNLKKSKVKVLEASEGMTLERV
EF3030 SSGIHSFEPSANDIAAIYDADVFVYHSHTLESWAGSLDPNLKKSKVKVLEASEGMTLERV
************************************************************
TIGR4 PGLEDVEAGDGVDEKTLYDPHTWLDPEKAGEEAQIIADKLSEVDSEHKETYQKNAQAFIK
D39 PGLEDVEAGDGVDEKTLYDPHTWLDPEKAGEEAQIIADKLSEVDSEHKETYQKNAQAFIK
D39V PGLEDVEAGDGVDEKTLYDPHTWLDPEKAGEEAQIIADKLSEVDSEHKETYQKNAQAFIK
Hungary19A-6 PGLEDVEAGDGVDEKTLYDPHTWLDPEKAGEEAQIIADKLSEVDSEHKETYQKNAQAFIK
EF3030 PGLEDVEAGDGVDEKTLYDPHTWLDPEKAGEEAQIIADKLSEVDSEHKETYQKNAQAFIK
************************************************************
TIGR4 KAQELTKKFQPKFEKATQKTFVTQHTAFSYLAKRFGLNQLGIAGISPEQEPSPRQLTEIQ
D39 KAQELTKKFQPKFEKATQKTFVTQHTAFSYLAKRFGLNQLGIAGISPEQEPSPRQLTEIQ
D39V KAQELTKKFQPKFEKATQKTFVTQHTAFSYLAKRFGLNQLGIAGISPEQEPSPRQLTEIQ
Hungary19A-6 KAQELTKKFQPKFEKATQKTFVTQHTAFSYLAKRFGLNQLGIAGISPEQEPSPRQLTEIQ
EF3030 KAQELTKKFQPKFEKATQKTFVTQHTAFSYLAKRFGLNQLGIAGISPEQEPSPRQLTEIQ
************************************************************
TIGR4 EFVKTYKVKTIFTESNASSKVAETLVKSTGVGLKTLNPLESDPQNDKTYLENLEENMSIL
D39 EFVKTYKVKTIFTESNASSKVAETLVKSTGVGLKTLNPLESDPQNDKTYLENLEENMSIL
D39V EFVKTYKVKTIFTESNASSKVAETLVKSTGVGLKTLNPLESDPQNDKTYLENLEENMSIL
Hungary19A-6 EFVKTYKVKTIFTESNASSKVAETLVKSTGVGLKTLNPLEADPQNDKTYLENLEENMSIL
EF3030 EFVKTYKVKTIFTESNASSKVAETLVKSTGVGLKTLNPLESDPQNDKTYLENLEENMSIL
****************************************:*******************
TIGR4 AEELK
D39 AEELK
D39V AEELK
Hungary19A-6 AEELK
EF3030 AEELK
*****