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PangenomeTIGR4
serotype 4
D39serotype 2
D39Vserotype 2
Hungary19A-6serotype 19A
EF3030serotype 19F
670-6Bserotype 6B
6A-10serotype 6A
70585serotype 5
A026serotype 19F
A66serotype 3
AP200serotype 11A
ASP0581serotype 12F
ATCC 49619serotype 19F
ATCC 700669serotype 23F
BVJ1JLserotype 1
CGSP14serotype 14
G54serotype 19F
HU-OHserotype 3
Hu15serotype 19A
Hu17serotype 19A
INV104serotype 1
INV200serotype 14
JJAserotype 14
MDRSPN001serotype 19F
NCTC7466serotype 2
NU83127serotype 4
OXC141serotype 3
P1031serotype 1
R6serotype 2
SP49serotype 19A
SPN032672serotype 1
SPN034156serotype 3
SPN034183serotype 3
SPN994038serotype 3
SPN994039serotype 3
SPNA45serotype 3
ST556serotype 19F
TCH8431/19Aserotype 19A
Taiwan19F-14serotype 19F
Xen35serotype 4
gamPNI0373serotype 1
⊟Summary[edit | edit source]
- pan ID?: PNEUPAN002033000
- symbol?: phtB
- synonym:
- description?: pneumococcal-type histidine triad protein
- pneumococcal-type histidine triad protein
- pneumococcal histidine triad protein PhtB
- pneumococcal histidine triad protein B
- Histidine Motif-Containing protein
- conserved domain protein
- histidine triad protein
- pneumococcal histidine triad protein D
- putative streptococcal histidine triad protein PhpA
descriptions from strain specific annotations:
- strand?: -
- coordinates?: 2407131..2407131
- occurrence?: in 32% of 41 strains
⊟Orthologs[edit | edit source]
Hungary19A-6:
—
EF3030:
—
A026:
—
A66:
—
AP200:
—
BVJ1JL:
—
CGSP14:
—
G54:
—
JJA:
—
MDRSPN001:
—
NCTC7466:
—
SPN034156:
—
SPN034183:
—
SPN994038:
—
SPN994039:
—
SPNA45:
—
ST556:
—
⊟Genome Viewer[edit | edit source]
TIGR4 | |
D39 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.505)
TIGR4 MKINKKYLAGSVAVLALSVCSYELGRYQAGQDKKESNRVAYIDGDQAGQKAENLTPDEVS
D39 MKINKKYLAGSVATLVLSVCAYELGLHQA-QTVKENNRVSYIDGKQATQKTENLTPDEVS
*************.*.****:**** :** * **.***:****.** **:*********
TIGR4 KREGINAEQIVIKITDQGYVTSHGDHYHYYNGKVPYDAIISEELLMKDPNYQLKDSDIVN
D39 KREGINAEQIVIKITDQGYVTSHGDHYHYYNGKVPYDAIISEELLMKDPNYQLKDEDIIS
*******************************************************.**:.
TIGR4 EIKGGYVIKVNGKYYVYLKDAAHADNIRTKEEIKRQKQERSHNHNS---RADNAVAAARA
D39 EIKGGYVIKVDGKYYVYLKDAAHADNVRTKEEINRQKQEHSQHREGGTPRNDGAVALARS
**********:***************:******:*****:*::::. * *.*** **:
TIGR4 QGRYTTDDGYIFNASDIIEDTGDAYIVPHGDHYHYIPKNELSASELAAAEAYWNG-----
D39 QGRYTTDDGYIFNASDIIEDTGDAYIVPHGDHYHYIPKNELSASELAAAKAFLSGRGNLS
*************************************************:*: .*
TIGR4 ------KQGSRPSSSSSYNANPAQPRLSENHNLTVTPTYHQ-NQGENISSLLRELYAKPL
D39 NSRTYRRQNSDNTSRTNWVPSVSNPGTTNTNTSNNSNTNSQASQSNDIDSLLKQLYKLPL
:*.* :* :.: .. ::* ::.:. . : * * .*.::*.***::** **
TIGR4 SERHVESDGLIFDPAQITSRTARGVAVPHGNHYHFIPYEQMSELEKRIARIIPLRYRSNH
D39 SQRHVESDGLIFDPAQITSRTANGVAVPHGDHYHFIPYSQLSPLEEKLARIIPLRYRSNH
*:********************.*******:*******.*:* **:::************
TIGR4 WVPDSRPEEPSPQPTPEPSPS------PQPAPSNPIDEKLVKEAVRKVGDGYVFEENGVS
D39 WVPDSRPEQPSPQSTPEPSPSPQPAPNPQPAPSNPIDEKLVKEAVRKVGDGYVFEENGVP
********:****.******* ********************************.
TIGR4 RYIPAKDLSAETAAGIDSKLAKQESLSHKLGTKKTDLPSSDREFYNKAYDLLARIHQDLL
D39 RYIPAKDLSAETAAGIDSKLAKQESLSHKLGAKKTDLPSSDREFYNKAYDLLARIHQDLL
*******************************:****************************
TIGR4 DNKGRQVDFEALDNLLERLKDVSSDKVKLVEDILAFLAPIRHPERLGKPNAQITYTDDEI
D39 DNKGRQVDFEALDNLLERLKDVSSDKVKLVDDILAFLAPIRHPERLGKPNAQITYTDDEI
******************************:*****************************
TIGR4 QVAKLAGKYTTEDGYIFDPRDITSDEGDAYVTPHMTHSHWIKKDSLSEAERAAAQAYAKE
D39 QVAKLAGKYTTEDGYIFDPRDITSDEGDAYVTPHMTHSHWIKKDSLSEAERAAAQAYAKE
************************************************************
TIGR4 KGLTPPSTDHQDSGNTEAKGAEAIYNRVKAAKKVPLDRMPYNLQYTVEVKNGSLIIPHYD
D39 KGLTPPSTDHQDSGNTEAKGAEAIYNRVKAAKKVPLDRMPYNLQYTVEVKNGSLIIPHYD
************************************************************
TIGR4 HYHNIKFEWFDEGLYEAPKGYTLEDLLATVKYYVEHPNERPHSDNGFGNASDHVQRNKNG
D39 HYHNIKFEWFDEGLYEAPKGYSLEDLLATVKYYVEHPNERPHSDNGFGNASDHVQRNKNG
*********************:**************************************
TIGR4 QADTNQTEKPSEEKPQTEKPEEETPREEKPQSEKPESPKPTEE-----PEESPEESEEPQ
D39 QADTNQTEKPNEEKPQTEKPEEETPREEKPQSEKPESPKPTEEPEEESPEESPEESEEPQ
**********.******************************** ************
TIGR4 VETEKVEEKLREAEDLLGKIQDPIIKSNAKETLTGLKNNLLFGTQDNNTIMAEAEKLLAL
D39 VETEKVKEKLREAEDLLGKIQNPIIKSNAKETLTGLKNNLLFGTQDNNTIMAEAEKLLAL
******:**************:**************************************
TIGR4 LKESK
D39 LKESK
*****