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PangenomeTIGR4
serotype 4
D39
serotype 2
D39V
serotype 2
Hungary19A-6
serotype 19A
EF3030
serotype 19F
670-6B
serotype 6B
6A-10
serotype 6A
70585
serotype 5
A026
serotype 19F
A66
serotype 3
AP200
serotype 11A
ASP0581
serotype 12F
ATCC 49619
serotype 19F
ATCC 700669
serotype 23F
BVJ1JL
serotype 1
CGSP14
serotype 14
G54
serotype 19F
HU-OH
serotype 3
Hu15
serotype 19A
Hu17
serotype 19A
INV104
serotype 1
INV200
serotype 14
JJA
serotype 14
MDRSPN001
serotype 19F
NCTC7466
serotype 2
NU83127
serotype 4
OXC141
serotype 3
P1031
serotype 1
R6
serotype 2
SP49
serotype 19A
SPN032672
serotype 1
SPN034156
serotype 3
SPN034183
serotype 3
SPN994038
serotype 3
SPN994039
serotype 3
SPNA45
serotype 3
ST556
serotype 19F
TCH8431/19A
serotype 19A
Taiwan19F-14
serotype 19F
Xen35
serotype 4
gamPNI0373
serotype 1

Summary[edit | edit source]

  • pan ID?: PNEUPAN002033000
  • symbol?: phtB
  • synonym:
  • description?: pneumococcal-type histidine triad protein

      descriptions from strain specific annotations:

    • pneumococcal-type histidine triad protein
    • pneumococcal histidine triad protein PhtB
    • pneumococcal histidine triad protein B
    • Histidine Motif-Containing protein
    • conserved domain protein
    • histidine triad protein
    • pneumococcal histidine triad protein D
    • putative streptococcal histidine triad protein PhpA
  • strand?: -
  • coordinates?: 2407131..2407131
  • occurrence?: in 32% of 41 strains

Orthologs[edit | edit source]

Genome Viewer[edit | edit source]

TIGR4
D39

Alignments[edit | edit source]

  • alignment of orthologues:
    CLUSTAL format alignment by MAFFT L-INS-i (v7.505)


    TIGR4           MKINKKYLAGSVAVLALSVCSYELGRYQAGQDKKESNRVAYIDGDQAGQKAENLTPDEVS
    D39             MKINKKYLAGSVATLVLSVCAYELGLHQA-QTVKENNRVSYIDGKQATQKTENLTPDEVS
                    *************.*.****:**** :** *  **.***:****.** **:*********

    TIGR4           KREGINAEQIVIKITDQGYVTSHGDHYHYYNGKVPYDAIISEELLMKDPNYQLKDSDIVN
    D39             KREGINAEQIVIKITDQGYVTSHGDHYHYYNGKVPYDAIISEELLMKDPNYQLKDEDIIS
                    *******************************************************.**:.

    TIGR4           EIKGGYVIKVNGKYYVYLKDAAHADNIRTKEEIKRQKQERSHNHNS---RADNAVAAARA
    D39             EIKGGYVIKVDGKYYVYLKDAAHADNVRTKEEINRQKQEHSQHREGGTPRNDGAVALARS
                    **********:***************:******:*****:*::::.   * *.*** **:

    TIGR4           QGRYTTDDGYIFNASDIIEDTGDAYIVPHGDHYHYIPKNELSASELAAAEAYWNG-----
    D39             QGRYTTDDGYIFNASDIIEDTGDAYIVPHGDHYHYIPKNELSASELAAAKAFLSGRGNLS
                    *************************************************:*: .*     

    TIGR4           ------KQGSRPSSSSSYNANPAQPRLSENHNLTVTPTYHQ-NQGENISSLLRELYAKPL
    D39             NSRTYRRQNSDNTSRTNWVPSVSNPGTTNTNTSNNSNTNSQASQSNDIDSLLKQLYKLPL
                          :*.*  :* :.: .. ::*  ::.:. . : *  * .*.::*.***::**  **

    TIGR4           SERHVESDGLIFDPAQITSRTARGVAVPHGNHYHFIPYEQMSELEKRIARIIPLRYRSNH
    D39             SQRHVESDGLIFDPAQITSRTANGVAVPHGDHYHFIPYSQLSPLEEKLARIIPLRYRSNH
                    *:********************.*******:*******.*:* **:::************

    TIGR4           WVPDSRPEEPSPQPTPEPSPS------PQPAPSNPIDEKLVKEAVRKVGDGYVFEENGVS
    D39             WVPDSRPEQPSPQSTPEPSPSPQPAPNPQPAPSNPIDEKLVKEAVRKVGDGYVFEENGVP
                    ********:****.*******      ********************************.

    TIGR4           RYIPAKDLSAETAAGIDSKLAKQESLSHKLGTKKTDLPSSDREFYNKAYDLLARIHQDLL
    D39             RYIPAKDLSAETAAGIDSKLAKQESLSHKLGAKKTDLPSSDREFYNKAYDLLARIHQDLL
                    *******************************:****************************

    TIGR4           DNKGRQVDFEALDNLLERLKDVSSDKVKLVEDILAFLAPIRHPERLGKPNAQITYTDDEI
    D39             DNKGRQVDFEALDNLLERLKDVSSDKVKLVDDILAFLAPIRHPERLGKPNAQITYTDDEI
                    ******************************:*****************************

    TIGR4           QVAKLAGKYTTEDGYIFDPRDITSDEGDAYVTPHMTHSHWIKKDSLSEAERAAAQAYAKE
    D39             QVAKLAGKYTTEDGYIFDPRDITSDEGDAYVTPHMTHSHWIKKDSLSEAERAAAQAYAKE
                    ************************************************************

    TIGR4           KGLTPPSTDHQDSGNTEAKGAEAIYNRVKAAKKVPLDRMPYNLQYTVEVKNGSLIIPHYD
    D39             KGLTPPSTDHQDSGNTEAKGAEAIYNRVKAAKKVPLDRMPYNLQYTVEVKNGSLIIPHYD
                    ************************************************************

    TIGR4           HYHNIKFEWFDEGLYEAPKGYTLEDLLATVKYYVEHPNERPHSDNGFGNASDHVQRNKNG
    D39             HYHNIKFEWFDEGLYEAPKGYSLEDLLATVKYYVEHPNERPHSDNGFGNASDHVQRNKNG
                    *********************:**************************************

    TIGR4           QADTNQTEKPSEEKPQTEKPEEETPREEKPQSEKPESPKPTEE-----PEESPEESEEPQ
    D39             QADTNQTEKPNEEKPQTEKPEEETPREEKPQSEKPESPKPTEEPEEESPEESPEESEEPQ
                    **********.********************************     ************

    TIGR4           VETEKVEEKLREAEDLLGKIQDPIIKSNAKETLTGLKNNLLFGTQDNNTIMAEAEKLLAL
    D39             VETEKVKEKLREAEDLLGKIQNPIIKSNAKETLTGLKNNLLFGTQDNNTIMAEAEKLLAL
                    ******:**************:**************************************

    TIGR4           LKESK
    D39             LKESK
                    *****