PangenomeTIGR4

serotype 4

D39

serotype 2

D39V

serotype 2

Hungary19A-6

serotype 19A

EF3030

serotype 19F

670-6B

serotype 6B

6A-10

serotype 6A

70585

serotype 5

A026

serotype 19F

A66

serotype 3

AP200

serotype 11A

ASP0581

serotype 12F

ATCC 49619

serotype 19F

ATCC 700669

serotype 23F

BM6001

serotype 19F

BVJ1JL

serotype 1

CGSP14

serotype 14

G54

serotype 19F

HU-OH

serotype 3

Hu15

serotype 19A

Hu17

serotype 19A

INV104

serotype 1

INV200

serotype 14

JJA

serotype 14

MDRSPN001

serotype 19F

NCTC7465

serotype 1

NCTC7466

serotype 2

NU83127

serotype 4

OXC141

serotype 3

P1031

serotype 1

R6

serotype 2

SP49

serotype 19A

SPN032672

serotype 1

SPN034156

serotype 3

SPN034183

serotype 3

SPN994038

serotype 3

SPN994039

serotype 3

SPNA45

serotype 3

ST556

serotype 19F

TCH8431/19A

serotype 19A

Taiwan19F-14

serotype 19F

Xen35

serotype 4

gamPNI0373

serotype 1

⊟Summary

• pan ID^?: PNEUPAN002039000
• symbol^?: mnmE
• synonym:
• description^?: tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE

  descriptions from strain specific annotations:

  • tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE
  • tRNA modification GTPase TrmE
  • tRNA modification GTPase MnmE
  • tRNA modification GTPase
  • GTPase and tRNA-U34 5-formylation enzyme MnmE
  • GTPase and tRNA-U34 5-formylation enzyme TrmE
  • Predicted GTPase
  • thiophene and furan oxidation GTP-binding protein ThdF
  • Thiophene and furan oxidation protein
  • thiophene and furan oxidation protein ThdF
• strand^?: -
• coordinates^?: 2528308..2529681
• occurrence^?: in 100% of 43 strains

⊟Orthologs

(4)^?
TIGR4:
SP_RS05045 (mnmE)
(2)
D39:
SPD_RS04850 (mnmE)
(2)
D39V:
SPV_RS05490 (mnmE)
(19A)
Hungary19A-6:
SPH_RS05420 (mnmE)
(19F)
EF3030:
EF3030_RS04915 (mnmE)
(6B)^?
670-6B:
SP670_RS06445 (mnmE)
(6A)
6A-10:
HKM25_RS04825 (mnmE)
(5)
70585:
SP70585_RS05260 (mnmE)
(19F)
A026:
T308_RS05020 (mnmE)
(3)
A66:
A66_RS04600 (mnmE)
(11A)
AP200:
SPAP_RS05850 (mnmE)
(12F)
ASP0581:
EL334_RS05085 (mnmE)
(19F)
ATCC 49619:
EL263_RS05045 (mnmE)
(23F)
ATCC 700669:
SPN23F_RS04790 (mnmE)
(19F)
BM6001:
ODS73_RS05250 (mnmE)
(1)
BVJ1JL:
JN057_RS04875 (mnmE)
(14)
CGSP14:
SPCG_RS05165 (mnmE)
(19F)
G54:
SPG_RS04735 (mnmE)
(1)
gamPNI0373:
HMPREF1038_RS05765 (mnmE)
(3)
HU-OH:
EL271_RS04770 (mnmE)
(19A)
Hu15:
SPNHU15_RS04975 (mnmE)
(19A)
Hu17:
SPNHU17_RS04900 (mnmE)
(1)
INV104:
INV104_RS05145 (mnmE)
(14)
INV200:
SPNINV200_RS05010 (mnmE)
(14)
JJA:
SPJ_RS04785 (mnmE)
(19F)
MDRSPN001:
MDRSPN_RS04615 (mnmE)
(1)
NCTC7465:
AT689_RS08740 (mnmE)
(2)
NCTC7466:
DQM66_RS05500 (mnmE)
(4)
NU83127:
EL277_RS05125 (mnmE)
(3)
OXC141:
SPNOXC_RS04960 (mnmE)
(1)
P1031:
SPP_RS05055 (mnmE)
(2)
R6:
SPR_RS04605 (mnmE)
(19A)
SP49:
BMJ42_RS05635 (mnmE)
(1)
SPN032672:
SPN032672_RS00015 (mnmE)
(3)
SPN034156:
SPN034156_RS00015 (mnmE)
(3)
SPN034183:
SPN034183_RS04980 (mnmE)
(3)
SPN994038:
SPN994038_RS04885 (mnmE)
(3)
SPN994039:
SPN994039_RS04890 (mnmE)
(3)
SPNA45:
SPNA45_RS07395 (mnmE)
(19F)
ST556:
MYY_RS05500 (mnmE)
(19F)
Taiwan19F-14:
SPT_RS05290 (mnmE)
(19A)
TCH8431/19A:
HMPREF0837_RS06995 (mnmE)
(4)
Xen35:
CXP32_RS05085 (mnmE)

⊟Genome Viewer

TIGR4
D39
D39V
Hungary19A-6
EF3030

⊟Alignments

• alignment of orthologues:
  CLUSTAL format alignment by MAFFT L-INS-i (v7.505)
  
  
  TIGR4           MITREFDTIAAISTPLGEGAIGIVRLSGTDSFAIAQKIFKGKDLNKVASHTLNYGHIIDP
  D39             MITREFDTIAAISTPLGEGAIGIVRLSGTDSFAIAQKIFKGKDLNKVASHTLNYGHIIDP
  D39V            MITREFDTIAAISTPLGEGAIGIVRLSGTDSFAIAQKIFKGKDLNKVASHTLNYGHIIDP
  Hungary19A-6    MITREFDTIAAISTPLGEGAIGIVRLSGTDSFAIAQKIFKGKDLNKVASHTLNYGHIIDP
  EF3030          MITREFDTIAAISTPLGEGAIGIVRLSGTESFAIAQKIFKGKDLSQVASHTLNYGHIVDP
                  *****************************:**************.:***********:**
  
  TIGR4           LTGKVMDEVMVGAMKSPKTFTREDIIEINTHGGIAVTNEILQLAIREGARLAEPGEFTKR
  D39             LTGKVMDEVMVGAMKSPKTFTREDIIEINTHGGIAVTNEILQLAIREGARLAEPGEFTKR
  D39V            LTGKVMDEVMVGAMKSPKTFTREDIIEINTHGGIAVTNEILQLAIREGARLAEPGEFTKR
  Hungary19A-6    LTGKVMDEVMVGAMKSPKTFTREDIIEINTHGGIAVTNEILQLAIREGARLAEPGEFTKR
  EF3030          LTGKVMDEVMVGAMKSPKTFTREDIIEINTHGGIAVTNEILQLAIREGARLAEPGEFTKR
                  ************************************************************
  
  TIGR4           AFLNGRVDLTQAEAVMDIIRAKTDKAMNIAVKQLDGSLSDLINNTRQEILNTLAQVEVNI
  D39             AFLNGRVDLTQAEAVMDIIRAKTDKAMNIAVKQLDGSLSDLINNTRQEILNTLAQVEVNI
  D39V            AFLNGRVDLTQAEAVMDIIRAKTDKAMNIAVKQLDGSLSDLINNTRQEILNTLAQVEVNI
  Hungary19A-6    AFLNGRVDLTQAEAVMDIIRAKTDKAMNIAVKQLDGSLSDLINNIRQEILNTLAQVEVNI
  EF3030          AFLNGRVDLTQAEAVMDIIRAKTDKAMNIAVKQLDGSLSDLINNTRQEILNTLAQVEVNI
                  ******************************************** ***************
  
  TIGR4           DYPEYDDVEEATTAVVREKTMEFEQLLTKLLRTARRGKILREGISTAIIGRPNVGKSSLL
  D39             DYPEYDDVEEATTAVVREKTMEFEQLLTKLLRTARRGKILREGISTAIIGRPNVGKSSLL
  D39V            DYPEYDDVEEATTAVVREKTMEFEQLLTKLLRTARRGKILREGISTAIIGRPNVGKSSLL
  Hungary19A-6    DYPEYDDVEEATTAVVREKTMEFEQLLTKLLRTARRGKILREGISTAIIGRPNVGKSSLL
  EF3030          DYPEYDDVEEATTAVVREKTMEFEQLLTNLLRTARRGKILREGISTAIIGRPNVGKSSLL
                  ****************************:*******************************
  
  TIGR4           NNLLREDKAIVTDIAGTTRDVIEEYVNINGVPLKLIDTAGIRETDDIVEQIGVERSKKAL
  D39             NNLLREDKAIVTDIAGTTRDVIEEYVNINGVPLKLIDTAGIRETDDIVEQIGVERSKKAL
  D39V            NNLLREDKAIVTDIAGTTRDVIEEYVNINGVPLKLIDTAGIRETDDIVEQIGVERSKKAL
  Hungary19A-6    NNLLREDKAIVTDIAGTTRDVIEEYVNINGVPLKLIDTAGIRETDDIVEQIGVERSKKAL
  EF3030          NNLLREDKAIVTDIAGTTRDVIEEYVNINGVPLKLIDTAGIRETDDIVEQIGVERSKKAL
                  ************************************************************
  
  TIGR4           KEADLVLLVLNASEPLTAQDRQLLEISQETNRIILLNKTDLPETIETSELPEDVIRISVL
  D39             KEADLVLLVLNASEPLTAQDRQLLEISQDTNRIILLNKTDLPETIETSKLPEDVIRISVL
  D39V            KEADLVLLVLNASEPLTAQDRQLLEISQDTNRIILLNKTDLPETIETSKLPEDVIRISVL
  Hungary19A-6    KEADLVLLVLNASEPLTAQDRQLLEISQDTNRIILLNKTDLPETIETSKLPEDVIRISVL
  EF3030          KEADLVLLVLNASEPLTAQDRQLLEISQDTNRIILLNKTDLPETIETSKLPEDVIRISVL
                  ****************************:*******************:***********
  
  TIGR4           KNQNIDKIEERINNLFFENAGLVEQDATYLSNARHISLIEKAVESLQAVNQGLELGMPVD
  D39             KNQNIDKIEERINNLFFENAGLVEQDATYLSNARHISLIEKAVESLQAVNQGLELGMPVD
  D39V            KNQNIDKIEERINNLFFENAGLVEQDATYLSNARHISLIEKAVESLQAVNQGLELGMPVD
  Hungary19A-6    KNQNIDKIEERINNLFFENAGLVEQDATYLSNARHISLIEKAVESLQAVNQGLELGMPVD
  EF3030          KNQNIDKIEERINNLFFENAGLVEQDATYLSNARHISLIEKAVESLQAVNQGLELGMPVD
                  ************************************************************
  
  TIGR4           LLQVDLTRTWEILGEITGDAAPDELITQLFSQFCLGK
  D39             LLQVDLTRTWEILGEITGDATPDELITQLFSQFCLGK
  D39V            LLQVDLTRTWEILGEITGDATPDELITQLFSQFCLGK
  Hungary19A-6    LLQVDLTRTWEILGEITGDAAPDELITQLFSQFCLGK
  EF3030          LLQVDLTRTWEILGEITGDAAPDELITQLFSQFCLGK
                  ********************:****************