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PangenomeTIGR4
serotype 4
D39serotype 2
D39Vserotype 2
Hungary19A-6serotype 19A
EF3030serotype 19F
670-6Bserotype 6B
6A-10serotype 6A
70585serotype 5
A026serotype 19F
A66serotype 3
AP200serotype 11A
ASP0581serotype 12F
ATCC 49619serotype 19F
ATCC 700669serotype 23F
BM6001serotype 19F
BVJ1JLserotype 1
CGSP14serotype 14
G54serotype 19F
HU-OHserotype 3
Hu15serotype 19A
Hu17serotype 19A
INV104serotype 1
INV200serotype 14
JJAserotype 14
MDRSPN001serotype 19F
NCTC7465serotype 1
NCTC7466serotype 2
NU83127serotype 4
OXC141serotype 3
P1031serotype 1
R6serotype 2
SP49serotype 19A
SPN032672serotype 1
SPN034156serotype 3
SPN034183serotype 3
SPN994038serotype 3
SPN994039serotype 3
SPNA45serotype 3
ST556serotype 19F
TCH8431/19Aserotype 19A
Taiwan19F-14serotype 19F
Xen35serotype 4
gamPNI0373serotype 1
⊟Summary[edit | edit source]
- pan ID?: PNEUPAN002076000
- symbol?: piaA
- synonym:
- description?: iron-siderophore ABC transporter substrate-binding protein
- iron-siderophore ABC transporter substrate-binding protein
- ABC transporter substrate-binding protein - iron transport
- putative iron-siderophore binding lipoprotein
- Fe(3+)-citrate-binding protein YfmC
- iron ABC transporter substrate binding protein
- iron-compound ABC transporter, iron compound-binding protein
- Iron compound ABC uptake transporter substrate-binding protein PiaA
- iron ABC transporter permease
- ABC-type Fe3+-hydroxamate transport system, periplasmic component
- FecCD transport system
- iron ABC transporter, iron-binding protein
- periplasmic binding family protein
- periplasmic binding protein
descriptions from strain specific annotations:
- strand?: +
- coordinates?: 2562692..2563729
- occurrence?: in 100% of 43 strains
⊟Orthologs[edit | edit source]
⊟Genome Viewer[edit | edit source]
| TIGR4 | |
| D39 | |
| D39V | |
| Hungary19A-6 | |
| EF3030 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.505)
TIGR4 MKNKFFLIAILAMCIVFSACSSNSVKNEENTSKEHAPDKIVLDHAFGQTILDKKPERVAT
D39 MKNKFFLIAILAMCIVFSACSSNSVKNEENTSKEHAPDKIVLDHAFGQTILDKKPERVAT
D39V MKNKFFLIAILAMCIVFSACSSNSVKNEENTSKEHAPDKIVLDHAFGQTILDKKPERVAT
Hungary19A-6 MKNKFFLIAILAMCIVFSACSSNSVKNEENTSKEHAPDKIVLDHAFGQTILDKKPERVAT
EF3030 MKNKFFLIAILAMCIVFSACSSNSVKNEENTSKEHAPDKIVLDHAFGQTILDKKPERVAT
************************************************************
TIGR4 IAWGNHDVALALGIVPVGFSKANYGVSADKGVLPWTEEKIKELNGKANLFDDLDGLNFEA
D39 IAWGNHDVALALGIVPVGFSKANYGVSADKGVLPWTEEKIKELNGKANLFDDLDGLNFEA
D39V IAWGNHDVALALGIVPVGFSKANYGVSADKGVLPWTEEKIKELNGKANLFDDLDGLNFEA
Hungary19A-6 IAWGNHDVALALGIVPVGLSKANYGVSADKGVLPWTEEKIKELNGKANLFDDLDGLNFEA
EF3030 IAWGNHDVALALGIVPVGFSKANYGVSADKGVLPWTEEKIKELNGKANLFDDLDGLNFEA
******************:*****************************************
TIGR4 ISNSKPDVILAGYSGITKEDYDTLSKIAPVAAYKSKPWQTLWRDMIKIDSKALGMEKEGD
D39 ISNSKPDVILAGYSGITKEDYDTLSKIAPVAAYKSKPWQTLWRDMIKIDSKALGMEKEGD
D39V ISNSKPDVILAGYSGITKEDYDTLSKIAPVAAYKSKPWQTLWRDMIKIDSKALGMEKEGD
Hungary19A-6 ISNSKPDVILAGYSGITKEDYDTLSKIAPVAAYKSKPWQTLWRDMIRIDSKALGMEKEGD
EF3030 ISNSKPDVILAGYSGITKEDYDTLSKIAPVAAYKSKPWQTLWRDMIKIDSKALGMEKEGD
**********************************************:*************
TIGR4 ELIKNTEARISKELEKHPEIKGKIKGKKVLFTMINAADTSKFWIYTSKDPRANYLTDLGL
D39 ELIKNTEARISKELEKHPEIKGKIKGKKVLFTMINAADTSKFWIYTSKDPRANYLTDLGL
D39V ELIKNTEARISKELEKHPEIKGKIKGKKVLFTMINAADTSKFWIYTSKDPRANYLTDLGL
Hungary19A-6 ELIKNTEARISKELEKHPEIKGKIKGKKVLFTMINAADTSKFWIYTSKDPRANYLTDLGL
EF3030 ELIKNTEARISKELEKHPEIKGKIKGKKVLFTMINAADTSKFWIYTSKDPRANYLTDLGL
************************************************************
TIGR4 VFPESLKEFESEDSFAKEISAEEANKINDADVIITYGDDKTLEALQKDPLLGKINAIKNG
D39 VFPESLKEFESEDSFAKEISAEEANKINDADVIITYGDDKTLEALQKDPLLGKINAIKNG
D39V VFPESLKEFESEDSFAKEISAEEANKINDADVIITYGDDKTLEALQKDPLLGKINAIKNG
Hungary19A-6 VFPESLKEFESEDSFAKEISAEEANKINDADVIITYGDDKTLEALQKDPLLGKINAIKNG
EF3030 VFPESLKEFESEDSFAKEISAEEANKINDADVIITYGDDKTLEALQKDPLLGKINAIKNG
************************************************************
TIGR4 AVAVIPDNTPLAASCTPTPLSINYTIEEYLNLLGNACKNAK
D39 AVAVIPDNTPLAASCTPTPLSINYTIEEYLNLLGNACKNAK
D39V AVAVIPDNTPLAASCTPTPLSINYTIEEYLNLLGNACKNAK
Hungary19A-6 AVAVIPDNTPLAASCTPTPLSINYTIEEYLNLLGNACKNAK
EF3030 AVAVIPDNTPLAASCTPTPLSINYTIEEYLNLLGNACKNAK
*****************************************