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PangenomeTIGR4
serotype 4
D39serotype 2
D39Vserotype 2
Hungary19A-6serotype 19A
EF3030serotype 19F
670-6Bserotype 6B
6A-10serotype 6A
70585serotype 5
A026serotype 19F
A66serotype 3
AP200serotype 11A
ASP0581serotype 12F
ATCC 49619serotype 19F
ATCC 700669serotype 23F
BVJ1JLserotype 1
CGSP14serotype 14
G54serotype 19F
HU-OHserotype 3
Hu15serotype 19A
Hu17serotype 19A
INV104serotype 1
INV200serotype 14
JJAserotype 14
MDRSPN001serotype 19F
NCTC7466serotype 2
NU83127serotype 4
OXC141serotype 3
P1031serotype 1
R6serotype 2
SP49serotype 19A
SPN032672serotype 1
SPN034156serotype 3
SPN034183serotype 3
SPN994038serotype 3
SPN994039serotype 3
SPNA45serotype 3
ST556serotype 19F
TCH8431/19Aserotype 19A
Taiwan19F-14serotype 19F
Xen35serotype 4
gamPNI0373serotype 1
⊟Summary[edit | edit source]
- pan ID?: PNEUPAN002094000
- symbol?: hemH
- synonym:
- description?: ferrochelatase
- ferrochelatase
- Ferrochelatase, protoheme ferro-lyase
- protoheme ferro-lyase
- Protoheme ferro-lyase (ferrochelatase)
- pseudogene
descriptions from strain specific annotations:
- strand?: +
- coordinates?: 2498024..2499413
- occurrence?: in 100% of 41 strains
⊟Orthologs[edit | edit source]
SPN034156:
SPN034156_RS10820 (hemH)
SPN034183:
SPN034183_RS04945 (hemH)
SPN994038:
SPN994038_RS04850 (hemH)
⊟Genome Viewer[edit | edit source]
| TIGR4 | |
| D39 | |
| D39V | |
| Hungary19A-6 | |
| EF3030 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.505)
TIGR4 MKKAILMMTFGSPEEIIFEGVADFFTNIRRGVRPQDHEIQTLYDNYVRIGGTPLQKITRQ
D39 MKKAILMMTFGSPEEITFEGVADFFTNIRRGVRPQDHEIQTLYDNYVRIGGTPLQKITRQ
D39V MKKAILMMTFGSPEEITFEGVADFFTNIRRGVRPQDHEIQTLYDNYVRIGGTPLQKITRQ
Hungary19A-6 MKKAILMMTFGSPEEITFEGVADFFTNIRRGVRPQDHEIQTLYDNYVRIGGTPLQKITRQ
EF3030 MKKAILMMTFGSPEEITFEGVADFFTNIRRGVRPQDHEIQTLYDNYVRIGGTPLQKITRQ
**************** *******************************************
TIGR4 EVALVEARLGSEYSVYFANKFSSPFIPDVIGQMEADGIEQCICLILEPHYSFYSVMGYEK
D39 EVTLVEARLGNEYSVYFANKFSSPFIPDVIGQMEADGIEQCICLILEPHYSFYSVMGYEK
D39V EVTLVEARLGNEYSVYFANKFSSPFIPDVIGQMEADGIEQCICLILEPHYSFYSVMGYEK
Hungary19A-6 EVALVEARLGNEYSVYFANKFSSPFIPDVIGQMEADGIEQCICLILEPHYSFYSVMGYEK
EF3030 EVALVEARLGNEYSVYFANKFSSPFIPDVIGQMEADGIEQCICLILEPHYSFYSVMGYEK
**:*******.*************************************************
TIGR4 FLESKQIQFLVIKDWYQEEALLNYWADEIAKILKEEVKQDSFKVIFSAHSVPIFALDFGD
D39 FLESKQIQFLVIKDWYQEEALLNYWADEIAKILKEEVKQDSFKVIFSAHSVPIFALDFGD
D39V FLESKQIQFLVIKDWYQEEALLNYWADEIAKILKEEVKQDSFKVIFSAHSVPIFALDFGD
Hungary19A-6 FLESKQIQFLVIKDWYQEEALLNYWVDEIAKILKEEVKQDSCKVIFSAHSVPIFALDFGD
EF3030 FLESKQIQFLVIKDWYQEEALLNYWADEIAKILKEEVKQDSFKVIFSAHSVPIFALDFGD
*************************.*************** ******************
TIGR4 PYIDQIFENSKLVAEKLGLSSEQYTNTWQSESDIGIPWIKPDVLEYLREQTEHPDHYIFV
D39 PYIDQIFENSKLVAEKLGLSSEQYTNTWQSESDIGIPWIKPDVLEYLREQTEHPDHYIFV
D39V PYIDQIFENSKLVAEKLGLSSEQYTNTWQSESDIGIPWIKPDVLEYLREQTEHPDHYIFV
Hungary19A-6 PYIDQIFENSKLVAEKLGLSSEQYTNTWQSESDIGIPWIKPDVLEYLREQTEHPDHYIFV
EF3030 PYIDQIFENSKLVAEKLGLSSEQYTNTWQSESDIGIPWIKPDVLEYLREQTEHPDHYIFV
************************************************************
TIGR4 PISFISEHIEVLFDNDVECYDLCQEFGVNYHRPPMPNTDSRLIDALVNTVRVNENQEFKE
D39 PISFISEHIEVLFDNDVECYDLCQEFGVNYHRPPMPNTDSRLIDALVNTVRVNENQEFKE
D39V PISFISEHIEVLFDNDVECYDLCQEFGVNYHRPPMPNTDSRLIDALVNTVRVNENQEFKE
Hungary19A-6 PISFISEHIEVLFDNDVECYDLCQEFGVNYHRPPMPNTDSRLIDALVNTVRVNENQEFKE
EF3030 PISFISEHIEVLFDNDVECYDLCQEFGVNYHRPPMPNTDSRLIDALVNTVRVNENQEFKE
************************************************************
TIGR4 FLPEEETFDELVPSDETKNILAESQDLQMPEFVKKLIEKKGRENVKMPYLIKKMLEKAGK
D39 FLPEEETFDELVPSDETKNILAESEDLQMPEFVKKLIEKKGRENVKMPYLIKKMLEKAGK
D39V FLPEEETFDELVPSDETKNILAESEDLQMPEFVKKLIEKKGRENVKMPYLIKKMLEKAGK
Hungary19A-6 FLPEEETFDELVPSDETKNILAESEDLQMPEFVKKLIEKKGRENVKMPYLIKKMFEKAGK
EF3030 FLPEEETFDELVPSDETKNILAESEDLQMPEFVKKLIEKKGRENVKMPYLIKKMLEKAGK
************************:*****************************:*****
TIGR4 LPKE
D39 LPKE
D39V LPKE
Hungary19A-6 LPKE
EF3030 LPKE
****