PangenomeTIGR4

serotype 4

D39

serotype 2

D39V

serotype 2

Hungary19A-6

serotype 19A

EF3030

serotype 19F

670-6B

serotype 6B

6A-10

serotype 6A

70585

serotype 5

A026

serotype 19F

A66

serotype 3

AP200

serotype 11A

ASP0581

serotype 12F

ATCC 49619

serotype 19F

ATCC 700669

serotype 23F

BM6001

serotype 19F

BVJ1JL

serotype 1

CGSP14

serotype 14

G54

serotype 19F

HU-OH

serotype 3

Hu15

serotype 19A

Hu17

serotype 19A

INV104

serotype 1

INV200

serotype 14

JJA

serotype 14

MDRSPN001

serotype 19F

NCTC7465

serotype 1

NCTC7466

serotype 2

NU83127

serotype 4

OXC141

serotype 3

P1031

serotype 1

R6

serotype 2

SP49

serotype 19A

SPN032672

serotype 1

SPN034156

serotype 3

SPN034183

serotype 3

SPN994038

serotype 3

SPN994039

serotype 3

SPNA45

serotype 3

ST556

serotype 19F

TCH8431/19A

serotype 19A

Taiwan19F-14

serotype 19F

Xen35

serotype 4

gamPNI0373

serotype 1

⊟Summary

• pan ID^?: PNEUPAN002189000
• symbol^?: rffD
• synonym:
• description^?: nucleotide sugar dehydrogenase

  descriptions from strain specific annotations:

  • nucleotide sugar dehydrogenase
  • UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase
  • nucleotide sugar dehydrogenase family protein
  • UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase, putative
• strand^?: +
• coordinates^?: 2735698..2737042
• occurrence^?: in 12% of 43 strains

⊟Orthologs

(4)^?
TIGR4:
—
(2)
D39:
SPD_RS05060
(2)
D39V:
SPV_RS05280
(19A)
Hungary19A-6:
—
(19F)
EF3030:
—
(6B)^?
670-6B:
—
(6A)
6A-10:
HKM25_RS05035
(5)
70585:
—
(19F)
A026:
—
(3)
A66:
—
(11A)
AP200:
—
(12F)
ASP0581:
—
(19F)
ATCC 49619:
—
(23F)
ATCC 700669:
—
(19F)
BM6001:
—
(1)
BVJ1JL:
—
(14)
CGSP14:
—
(19F)
G54:
—
(1)
gamPNI0373:
—
(3)
HU-OH:
—
(19A)
Hu15:
—
(19A)
Hu17:
—
(1)
INV104:
—
(14)
INV200:
—
(14)
JJA:
—
(19F)
MDRSPN001:
—
(1)
NCTC7465:
—
(2)
NCTC7466:
DQM66_RS05290
(4)
NU83127:
—
(3)
OXC141:
—
(1)
P1031:
—
(2)
R6:
SPR_RS04810
(19A)
SP49:
—
(1)
SPN032672:
—
(3)
SPN034156:
—
(3)
SPN034183:
—
(3)
SPN994038:
—
(3)
SPN994039:
—
(3)
SPNA45:
—
(19F)
ST556:
—
(19F)
Taiwan19F-14:
—
(19A)
TCH8431/19A:
—
(4)
Xen35:
—

⊟Genome Viewer

D39
D39V

⊟Alignments

• alignment of orthologues:
  CLUSTAL format alignment by MAFFT L-INS-i (v7.505)
  
  
  D39             MKNNFLSRIQNKKANITIWGAGYIGLSTAYHFALVGFRVKIFDTNHRLIQNLLEGNLPFK
  D39V            MKNNFLSRIQNKKANITIWGAGYIGLSTAYHFALVGFRVKIFDTNHRLIQNLLEGNLPFK
                  ************************************************************
  
  D39             IDLDEEIFSKLIFNKSILPEVVEHADTYSDEIQIICINTERNGVPISRPLTTVLDNITTV
  D39V            IDLDEEIFSKLIFNKSILPEVVEHADTYSDEIQIICINTERNGVPISRPLTTVLDNITTV
                  ************************************************************
  
  D39             SEQLVIVESTISPNWIDTIIRPKLNDLQYLTVAPRRDWFLETGLNLKTLPRVIGTLGSNY
  D39V            SEQLVIVESTISPNWIDTIIRPKLNDLQYLTVAPRRDWFLETGLNLKTLPRVIGTLGSNY
                  ************************************************************
  
  D39             RMEVLKLYEMLSDVVIEVTDAYHACLVKAVENSIRYINVVFANEMMRAFPRYNMAEIFDA
  D39V            RMEVLKLYEMLSDVVIEVTDAYHACLVKAVENSIRYINVVFANEMMRAFPRYNMAEIFDA
                  ************************************************************
  
  D39             ASTKWNIPYYHPSIGIGGYCLPLAPKYILDAVNDSEELPMLRESVKSDLKQSDFITDLIK
  D39V            ASTKWNIPYYHPSIGIGGYCLPLAPKYILDAVNDSEELPMLRESVKSDLKQSDFITDLIK
                  ************************************************************
  
  D39             SYNCQKVGVLGLSYAPETKIWKNSPVVSLIYSLLRNGIEVKINDPYFSSEEIQEITTVQS
  D39V            SYNCQKVGVLGLSYAPETKIWKNSPVVSLIYSLLRNGIEVKINDPYFSSEEIQEITTVQS
                  ************************************************************
  
  D39             FSLNSESLQEFDILVIATSHKSYDGELERILFDLNKEMIIFDNFGVNKNLSKLPNIHYFE
  D39V            FSLNSESLQEFDILVIATSHKSYDGELERILFDLNKEMIIFDNFGVNKNLSKLPNIHYFE
                  ************************************************************
  
  D39             IGNFQYNESRR
  D39V            IGNFQYNESRR
                  ***********