PangenomeTIGR4

serotype 4

D39

serotype 2

D39V

serotype 2

Hungary19A-6

serotype 19A

EF3030

serotype 19F

670-6B

serotype 6B

6A-10

serotype 6A

70585

serotype 5

A026

serotype 19F

A66

serotype 3

AP200

serotype 11A

ASP0581

serotype 12F

ATCC 49619

serotype 19F

ATCC 700669

serotype 23F

BM6001

serotype 19F

BVJ1JL

serotype 1

CGSP14

serotype 14

G54

serotype 19F

HU-OH

serotype 3

Hu15

serotype 19A

Hu17

serotype 19A

INV104

serotype 1

INV200

serotype 14

JJA

serotype 14

MDRSPN001

serotype 19F

NCTC7465

serotype 1

NCTC7466

serotype 2

NU83127

serotype 4

OXC141

serotype 3

P1031

serotype 1

R6

serotype 2

SP49

serotype 19A

SPN032672

serotype 1

SPN034156

serotype 3

SPN034183

serotype 3

SPN994038

serotype 3

SPN994039

serotype 3

SPNA45

serotype 3

ST556

serotype 19F

TCH8431/19A

serotype 19A

Taiwan19F-14

serotype 19F

Xen35

serotype 4

gamPNI0373

serotype 1

⊟Summary

• pan ID^?: PNEUPAN002206000
• symbol^?: trpX
• synonym:
• description^?: tryptophan ABC transporter substrate-binding protein

  descriptions from strain specific annotations:

  • tryptophan ABC transporter substrate-binding protein
  • ABC transporter substrate binding protein
  • putative ABC transporter substrate-binding protein
  • peptide ABC transporter substrate-binding protein
  • conserved hypothetical protein
  • ABC transporter ATP-binding protein
  • ABC transporter substrate binding family protein
  • ABC transporter substrate-binding protein - unknown substrate
  • ABC-type uncharacterized transport system, periplasmic component
  • pseudogene
• strand^?: +
• coordinates^?: 2771792..2772796
• occurrence^?: in 100% of 43 strains

⊟Orthologs

(4)^?
TIGR4:
SP_RS05285 (trpX)
(2)
D39:
SPD_RS05140 (trpX)
(2)
D39V:
SPV_RS05200 (trpX)
(19A)
Hungary19A-6:
SPH_RS05615 (trpX)
(19F)
EF3030:
EF3030_RS05995 (trpX)
(6B)^?
670-6B:
SP670_RS06260 (trpX)
(6A)
6A-10:
HKM25_RS05115 (trpX)
(5)
70585:
SP70585_RS05685 (trpX)
(19F)
A026:
T308_RS05230 (trpX)
(3)
A66:
A66_RS04880 (trpX)
(11A)
AP200:
SPAP_RS05580 (trpX)
(12F)
ASP0581:
EL334_RS05275 (trpX)
(19F)
ATCC 49619:
EL263_RS05330 (trpX)
(23F)
ATCC 700669:
SPN23F_RS05045 (trpX)
(19F)
BM6001:
ODS73_RS05445 (trpX)
(1)
BVJ1JL:
JN057_RS05470 (trpX)
(14)
CGSP14:
SPCG_RS06275 (trpX)
(19F)
G54:
SPG_RS04985 (trpX)
(1)
gamPNI0373:
HMPREF1038_RS05480 (trpX)
(3)
HU-OH:
EL271_RS05115 (trpX)
(19A)
Hu15:
SPNHU15_RS05160 (trpX)
(19A)
Hu17:
SPNHU17_RS05085 (trpX)
(1)
INV104:
INV104_RS05355 (trpX)
(14)
INV200:
SPNINV200_RS06090 (trpX)
(14)
JJA:
SPJ_RS05035 (trpX)
(19F)
MDRSPN001:
MDRSPN_RS04810 (trpX)
(1)
NCTC7465:
AT689_RS08480 (trpX)
(2)
NCTC7466:
DQM66_RS05210 (trpX)
(4)
NU83127:
EL277_RS05385 (trpX)
(3)
OXC141:
SPNOXC_RS05275 (trpX)
(1)
P1031:
SPP_RS05320 (trpX)
(2)
R6:
SPR_RS04885 (trpX)
(19A)
SP49:
BMJ42_RS05835 (trpX)
(1)
SPN032672:
SPN032672_RS00230 (trpX)
(3)
SPN034156:
SPN034156_RS00330 (trpX)
(3)
SPN034183:
SPN034183_RS05295 (trpX)
(3)
SPN994038:
SPN994038_RS05200 (trpX)
(3)
SPN994039:
SPN994039_RS05205 (trpX)
(3)
SPNA45:
SPNA45_RS07670 (trpX)
(19F)
ST556:
MYY_RS05710 (trpX)
(19F)
Taiwan19F-14:
SPT_RS05500 (trpX)
(19A)
TCH8431/19A:
HMPREF0837_RS06785 (trpX)
(4)
Xen35:
CXP32_RS05345 (trpX)

⊟Genome Viewer

TIGR4
D39
D39V
Hungary19A-6
EF3030

⊟Alignments

• alignment of orthologues:
  CLUSTAL format alignment by MAFFT L-INS-i (v7.505)
  
  
  TIGR4           MKNKRLIGIIAALAVLVAGSLIYSSMNKSEAQNNKDEKKITKIGVLQFVSHPSLDLIYKG
  D39             MKNKRLIGIIAALAVLVAGSLIYSSMNKSEAQNNKDEKKITKIGVLQFVSHPSLDLIYKG
  D39V            MKNKRLIGIIAALAVLVAGSLIYSSMNKSEAQNNKDEKKITKIGVLQFVSHPSLDLIYKG
  Hungary19A-6    MKNKRLIGIIAALAVLVAGSLIYSSMNKSEVQNNKDEKKITKIGVLQFVSHPSLDLIYKG
  EF3030          MKNKRLIGIIAALAVLVAGSLIYSSMNKSEAQNNKDEKKITKIGVLQFVSHPSLDLIYKG
                  ******************************.*****************************
  
  TIGR4           IQDGLAEEGYKDDQVKIDFMNSEGDQSKVATMSKQLVANGNDLVVGIATPAAQGLASATK
  D39             IQDGLAEEGYKDDQVKIDFMNSEGDQSKVATMSKQLVANGNDLVVGIATPAAQGLASATK
  D39V            IQDGLAEEGYKDDQVKIDFMNSEGDQSKVATMSKQLVANGNDLVVGIATPAAQGLASATK
  Hungary19A-6    IQDGLAEEGYKDDQVKIDFMNSEGDQSKVATMSKQLVANGNDLVVGIATPAAQGLASATK
  EF3030          IQDGLAEEGYKDDQVKIDFMNSEGDQSKVATMSKQLVANGNDLVVGIATPAAQGLASATK
                  ************************************************************
  
  TIGR4           DLPVIMAAITDPIGANLVKDLKKPGGNVTGVSDHNPAQQQVELIKALTPNVKTIGALYSS
  D39             DLPVIMAAITDPIGANLVKDLKKPGGNVTGVSDHNPAQQQVELIKALTPNVKTIGALYSS
  D39V            DLPVIMAAITDPIGANLVKDLKKPGGNVTGVSDHNPAQQQVELIKALTPNVKTIGALYSS
  Hungary19A-6    DLPVIMAAITDPIGANLVKDLKKPGGNVTGVSDHNPAQQQVELIKALTPNVKTIGALYSS
  EF3030          DLPVIMAAITDPIGANLVKDLKKPGGNITGVSDHNPAQQQVELIKALTPNVKTIGALYSS
                  ***************************:********************************
  
  TIGR4           SEDNSKTQVEEFKAYAEKAGLTVETFAVPSTNEIASTVTVMTSKVDAIWVPIDNTIASGF
  D39             SEDNSKTQVEEFKAYAEKAGLTVETFAVPSTNEIASTVTVMTSKVDAIWVPIDNTIASGF
  D39V            SEDNSKTQVEEFKAYAEKAGLTVETFAVPSTNEIASTVTVMTSKVDAIWVPIDNTIASGF
  Hungary19A-6    SEDNSKTQVEEFKAYAEKAGLTVETFAVPSTNEIASTVTVMTSKVDAIWVPIDNTIASGF
  EF3030          SEDNSKTQVEEFKAYAEKAGLTVETFAVPSTNEIASTVTVMTSKVDAIWVPIDNTIASGF
                  ************************************************************
  
  TIGR4           PTVVSSNQSSKKPIYPSATAMVEVGGLASVVIDQHDLGVATGKMIVQVLKGAKPADTPVN
  D39             PTVVSSNQSSKKPIYPSATAMVEVGGLASVVIDQHDLGVATGKMIVQVLKGAKPADTPVN
  D39V            PTVVSSNQSSKKPIYPSATAMVEVGGLASVVIDQHDLGVATGKMIVQVLKGAKPADTPVN
  Hungary19A-6    PTVVSSNQSSKKPIYPSATAMVEVGGLASVVIDQHDLGVATGKMIVQVLKGAKPADTPVN
  EF3030          PTVVSSNQSSKKPIYPSATAMVEVGGLASVVIDQHDLGVATGKMIVQVLKGAKPADTPVN
                  ************************************************************
  
  TIGR4           VFSTGKSVINKKIAQELGITIPESVLKEAGQVIE
  D39             VFSIGKSVINKKIAQELGITIPESVLKEAGQVIE
  D39V            VFSIGKSVINKKIAQELGITIPESVLKEAGQVIE
  Hungary19A-6    VFSTGKSVINKKIAQELGITIPESVLKEAGQVIE
  EF3030          VFSTGKSVINKKIAQELGITIPEFVLKEAGQVIE
                  *** ******************* **********