pan ID^?: PNEUPAN002237000
symbol^?: radC
synonym:
description^?: DNA repair protein RadC
- DNA repair protein RadC
- DNA repair protein
- JAB domain-containing protein
- DNA repair RadC family protein
- uncharacterized protein family UPF0758
strand^?: +
coordinates^?: 2693433..2694113
occurrence^?: in 100% of 41 strains

⊟Orthologs[edit | edit source]

TIGR4:

SP_RS05390 (radC)

D39:

SPD_RS05240 (radC)

D39V:

SPV_RS05100 (radC)

Hungary19A-6:

SPH_RS05725 (radC)

EF3030:

EF3030_RS05895 (radC)

670-6B:

SP670_RS06165 (radC)

6A-10:

HKM25_RS05210 (radC)

70585:

SP70585_RS05785 (radC)

A026:

T308_RS05345 (radC)

A66:

A66_RS04970 (radC)

AP200:

SPAP_RS05475 (radC)

ASP0581:

EL334_RS05370 (radC)

ATCC 49619:

EL263_RS05425 (radC)

ATCC 700669:

SPN23F_RS05145 (radC)

BVJ1JL:

JN057_RS05560 (radC)

CGSP14:

SPCG_RS06160 (radC)

G54:

SPG_RS05080 (radC)

gamPNI0373:

HMPREF1038_RS05380 (radC)

HU-OH:

EL271_RS05210 (radC)

Hu15:

SPNHU15_RS05245 (radC)

Hu17:

SPNHU17_RS05170 (radC)

INV104:

INV104_RS05450 (radC)

INV200:

SPNINV200_RS05975 (radC)

JJA:

SPJ_RS05135 (radC)

MDRSPN001:

MDRSPN_RS04910 (radC)

NCTC7466:

DQM66_RS05110 (radC)

NU83127:

EL277_RS05480 (radC)

OXC141:

SPNOXC_RS05370 (radC)

P1031:

SPP_RS05420 (radC)

R6:

SPR_RS04985 (radC)

SP49:

BMJ42_RS05935 (radC)

SPN032672:

SPN032672_RS00325 (radC)

SPN034156:

SPN034156_RS00425 (radC)

SPN034183:

SPN034183_RS05390 (radC)

SPN994038:

SPN994038_RS05295 (radC)

SPN994039:

SPN994039_RS05300 (radC)

SPNA45:

SPNA45_RS07765 (radC)

ST556:

MYY_RS05825 (radC)

Taiwan19F-14:

SPT_RS05615 (radC)

TCH8431/19A:

HMPREF0837_RS06670 (radC)

Xen35:

CXP32_RS05440 (radC)

⊟Genome Viewer[edit | edit source]

⊟Alignments[edit | edit source]

alignment of orthologues:
CLUSTAL format alignment by MAFFT L-INS-i (v7.505)

TIGR4           MYSISFQEDSLLPRERLAKEGVEALSNQELLAILLRTGTRQASVFEIAQKVLNNLSSLTD
D39             MYSISFQEDSLLPRERLAKEGVEALSNQELLAILLRTGTRQASVFEIAQKVLNNLSSLTD
D39V            MYSISFQEDSLLPRERLAKEGVEALSNQELLAILLRTGTRQASVFEIAQKVLNNLSSLTD
Hungary19A-6    MYSISFQEDSLLPRERLAKEGVEALSNQELLAILLRTGTRQASVFEIAQKVLNNLSSLTD
EF3030          MYSISFQEDSLLPRERLAKEGVEALSNQELLAILLRTGTRQASVFEIAQKVLNNLSSLTD
                ************************************************************

TIGR4           LKKMTLQELQSLSGIGRVKAIELQAMIELGHRIHKHETLEMESILSSQKLAKKMQQELGD
D39             LKKMTLQELQSLSGIGRVKAIELQAMIELGHRIHKHETLEMESILSSQKLAKKMQQELGD
D39V            LKKMTLQELQSLSGIGRVKAIELQAMIELGHRIHKHETLEMESILSSQKLAKKMQQELGD
Hungary19A-6    LKKMTLQELQSLSGIGRVKAIELQAMIELGHRIHKHETLEMESILSSQKLAKKMQQELGD
EF3030          LKKMTLQELQSLSGIGRVKAIELQAMIELGHRIHKHETLEMESILSSQKLAKKMQQELGD
                ************************************************************

TIGR4           KKQEHLVALYLNTQNQIIHQQTIFIGSVTRSIAEPREILHYAIKHMATSLILVHNHPSGA
D39             KKQEHLVALYLNTQNQIIHQQTIFIGSVTRSIAEPREILHYAIKHMATSLVLVHNHPSGA
D39V            KKQEHLVALYLNTQNQIIHQQTIFIGSVTRSIAEPREILHYAIKHMATSLVLVHNHPSGA
Hungary19A-6    KKQEHLVALYLNTQNQIIHQQTIFIGSVTRSIAEPREILHYAIKHMATSLILVHNHPSGA
EF3030          KKQEHLVALYLNTQNQIIHQQTIFIGSVTRSIAEPREILHYAIKHMATSLILVHNHPSGA
                **************************************************:*********

TIGR4           VAPSQNDDHVTKLVKEACELMGIVLLDHLIVSHSNYFSYREKTDLI
D39             VAPSQNDDHVTKLVKEACELMGIVLLDHLIVSHSNYFSYREKTDLI
D39V            VAPSQNDDHVTKLVKEACELMGIVLLDHLIVSHSNYFSYREKTDLI
Hungary19A-6    VAPSQNDDHVTKLVKEACELMGIVLLDHLIVSHSNYFSYREKTDLI
EF3030          VAPSQNDDHVTKLVKEACELMGIVLLDHLIVSHSNYFSYREKTDLI
                **********************************************

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⊟Summary[edit | edit source]

⊟Orthologs[edit | edit source]

⊟Genome Viewer[edit | edit source]

⊟Alignments[edit | edit source]

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⊟Summary[edit | edit source]

⊟Orthologs[edit | edit source]

⊟Genome Viewer[edit | edit source]

⊟Alignments[edit | edit source]