PangenomeTIGR4

serotype 4

D39

serotype 2

D39V

serotype 2

Hungary19A-6

serotype 19A

EF3030

serotype 19F

670-6B

serotype 6B

6A-10

serotype 6A

70585

serotype 5

A026

serotype 19F

A66

serotype 3

AP200

serotype 11A

ASP0581

serotype 12F

ATCC 49619

serotype 19F

ATCC 700669

serotype 23F

BVJ1JL

serotype 1

CGSP14

serotype 14

G54

serotype 19F

HU-OH

serotype 3

Hu15

serotype 19A

Hu17

serotype 19A

INV104

serotype 1

INV200

serotype 14

JJA

serotype 14

MDRSPN001

serotype 19F

NCTC7466

serotype 2

NU83127

serotype 4

OXC141

serotype 3

P1031

serotype 1

R6

serotype 2

SP49

serotype 19A

SPN032672

serotype 1

SPN034156

serotype 3

SPN034183

serotype 3

SPN994038

serotype 3

SPN994039

serotype 3

SPNA45

serotype 3

ST556

serotype 19F

TCH8431/19A

serotype 19A

Taiwan19F-14

serotype 19F

Xen35

serotype 4

gamPNI0373

serotype 1

⊟Summary

• pan ID^?: PNEUPAN002253000
• symbol^?: radC
• synonym:
• description^?: RadC family protein

  descriptions from strain specific annotations:

  • RadC family protein
  • DNA repair protein RadC
  • DNA repair protein
  • JAB domain-containing protein
  • DNA repair RadC family protein
  • uncharacterized protein family UPF0758
• strand^?: +
• coordinates^?: 2693433..2694113
• occurrence^?: in 100% of 41 strains

⊟Orthologs

TIGR4:
SP_RS05390 (radC)
D39:
SPD_RS05240 (radC)
D39V:
SPV_RS05100 (radC)
Hungary19A-6:
SPH_RS05725 (radC)
EF3030:
EF3030_RS05895 (radC)
670-6B:
SP670_RS06165 (radC)
6A-10:
HKM25_RS05210 (radC)
70585:
SP70585_RS05785 (radC)
A026:
T308_RS05345 (radC)
A66:
A66_RS04970 (radC)
AP200:
SPAP_RS05475 (radC)
ASP0581:
EL334_RS05370 (radC)
ATCC 49619:
EL263_RS05425 (radC)
ATCC 700669:
SPN23F_RS05145 (radC)
BVJ1JL:
JN057_RS05560 (radC)
CGSP14:
SPCG_RS06160 (radC)
G54:
SPG_RS05080 (radC)
gamPNI0373:
HMPREF1038_RS05380 (radC)
HU-OH:
EL271_RS05210 (radC)
Hu15:
SPNHU15_RS05245 (radC)
Hu17:
SPNHU17_RS05170 (radC)
INV104:
INV104_RS05450 (radC)
INV200:
SPNINV200_RS05975 (radC)
JJA:
SPJ_RS05135 (radC)
MDRSPN001:
MDRSPN_RS04910 (radC)
NCTC7466:
DQM66_RS05110 (radC)
NU83127:
EL277_RS05480 (radC)
OXC141:
SPNOXC_RS05370 (radC)
P1031:
SPP_RS05420 (radC)
R6:
SPR_RS04985 (radC)
SP49:
BMJ42_RS05935 (radC)
SPN032672:
SPN032672_RS00325 (radC)
SPN034156:
SPN034156_RS00425 (radC)
SPN034183:
SPN034183_RS05390 (radC)
SPN994038:
SPN994038_RS05295 (radC)
SPN994039:
SPN994039_RS05300 (radC)
SPNA45:
SPNA45_RS07765 (radC)
ST556:
MYY_RS05825 (radC)
Taiwan19F-14:
SPT_RS05615 (radC)
TCH8431/19A:
HMPREF0837_RS06670 (radC)
Xen35:
CXP32_RS05440 (radC)

⊟Genome Viewer

TIGR4
D39
D39V
Hungary19A-6
EF3030

⊟Alignments

• alignment of orthologues:
  CLUSTAL format alignment by MAFFT L-INS-i (v7.505)
  
  
  TIGR4           MSTYAIIKTGGKQVKVEVGQAVYVEKLNVEAGQEVTFNEVVLVGGENTVVGTPLVAGATV
  D39             MSTYAIIKTGGKQVKVEVGQAVYVEKLNVEAGQEVTFNEVVLVGGENTVVGTPLVAGATV
  D39V            MSTYAIIKTGGKQVKVEVGQAVYVEKLNVEAGQEVTFNEVVLVGGENTVVGTPLVAGATV
  Hungary19A-6    MSTYAIIKTGGKQVKVEVGQAVYVEKLNVEAGQEVTFNEVVLVGGENTVVGTPLVAGATV
  EF3030          MSTYAIIKTGGKQVKVEVGQAVYVEKLNVEAGQEVTFNEVVLVGGENTVVGTPLVAGATV
                  ************************************************************
  
  TIGR4           VGTVEKQGKQKKVVTYKYKPKKGSHRKQGHRQPYTKVVINAINA
  D39             VGTVEKQGKQKKVVTYKYKPKKGSHRKQGHRQPYTKVVINAINA
  D39V            VGTVEKQGKQKKVVTYKYKPKKGSHRKQGHRQPYTKVVINAINA
  Hungary19A-6    VGTVEKQGKQKKVVTYKYKPKKGSHRKQGHRQPYTKVVINAINA
  EF3030          VGTVEKQGKQKKVVTYKYKPKKGSHRKQGHRQPYTKVVINAINA
                  ********************************************