PangenomeTIGR4

serotype 4

D39

serotype 2

D39V

serotype 2

Hungary19A-6

serotype 19A

EF3030

serotype 19F

670-6B

serotype 6B

6A-10

serotype 6A

70585

serotype 5

A026

serotype 19F

A66

serotype 3

AP200

serotype 11A

ASP0581

serotype 12F

ATCC 49619

serotype 19F

ATCC 700669

serotype 23F

BM6001

serotype 19F

BVJ1JL

serotype 1

CGSP14

serotype 14

G54

serotype 19F

HU-OH

serotype 3

Hu15

serotype 19A

Hu17

serotype 19A

INV104

serotype 1

INV200

serotype 14

JJA

serotype 14

MDRSPN001

serotype 19F

NCTC7465

serotype 1

NCTC7466

serotype 2

NU83127

serotype 4

OXC141

serotype 3

P1031

serotype 1

R6

serotype 2

SP49

serotype 19A

SPN032672

serotype 1

SPN034156

serotype 3

SPN034183

serotype 3

SPN994038

serotype 3

SPN994039

serotype 3

SPNA45

serotype 3

ST556

serotype 19F

TCH8431/19A

serotype 19A

Taiwan19F-14

serotype 19F

Xen35

serotype 4

gamPNI0373

serotype 1

⊟Summary

• pan ID^?: PNEUPAN002384000
• symbol^?: xerS
• synonym:
• description^?: tyrosine recombinase XerS

  descriptions from strain specific annotations:

  • tyrosine recombinase XerS
  • tyrosine recombinase XerC
  • tyrosine recombinase
  • Integrase/recombinase
  • integrase/recombinase, phage integrase family
  • site-specific tyrosine recombinase XerS
  • Integrase
  • integrase/recombinase, phage integrase family protein
  • phage integrase, N-terminal SAM-like domain protein
• strand^?: +
• coordinates^?: 3047112..3048182
• occurrence^?: in 100% of 43 strains

⊟Orthologs

(4)^?
TIGR4:
SP_RS05715 (xerS)
(2)
D39:
SPD_RS05500 (xerS)
(2)
D39V:
SPV_RS04840 (xerS)
(19A)
Hungary19A-6:
SPH_RS06175 (xerS)
(19F)
EF3030:
EF3030_RS05635 (xerS)
(6B)^?
670-6B:
SP670_RS05495 (xerS)
(6A)
6A-10:
HKM25_RS05455 (xerS)
(5)
70585:
SP70585_RS06035 (xerS)
(19F)
A026:
T308_RS05600 (xerS)
(3)
A66:
A66_RS05215 (xerS)
(11A)
AP200:
SPAP_RS05210 (xerS)
(12F)
ASP0581:
EL334_RS06030 (xerS)
(19F)
ATCC 49619:
EL263_RS05685 (xerS)
(23F)
ATCC 700669:
SPN23F_RS05400 (xerS)
(19F)
BM6001:
ODS73_RS06135 (xerS)
(1)
BVJ1JL:
JN057_RS05825 (xerS)
(14)
CGSP14:
SPCG_RS05895 (xerS)
(19F)
G54:
SPG_RS05340 (xerS)
(1)
gamPNI0373:
HMPREF1038_RS05115 (xerS)
(3)
HU-OH:
EL271_RS05875 (xerS)
(19A)
Hu15:
SPNHU15_RS05690 (xerS)
(19A)
Hu17:
SPNHU17_RS05615 (xerS)
(1)
INV104:
INV104_RS05790 (xerS)
(14)
INV200:
SPNINV200_RS05715 (xerS)
(14)
JJA:
SPJ_RS05390 (xerS)
(19F)
MDRSPN001:
MDRSPN_RS05170 (xerS)
(1)
NCTC7465:
AT689_RS08230 (xerS)
(2)
NCTC7466:
DQM66_RS04850 (xerS)
(4)
NU83127:
EL277_RS05735 (xerS)
(3)
OXC141:
SPNOXC_RS05625 (xerS)
(1)
P1031:
SPP_RS05960 (xerS)
(2)
R6:
SPR_RS05225 (xerS)
(19A)
SP49:
BMJ42_RS06165 (xerS)
(1)
SPN032672:
SPN032672_RS00660 (xerS)
(3)
SPN034156:
SPN034156_RS00680 (xerS)
(3)
SPN034183:
SPN034183_RS05640 (xerS)
(3)
SPN994038:
SPN994038_RS05545 (xerS)
(3)
SPN994039:
SPN994039_RS05550 (xerS)
(3)
SPNA45:
SPNA45_RS08015 (xerS)
(19F)
ST556:
MYY_RS06080 (xerS)
(19F)
Taiwan19F-14:
SPT_RS05870 (xerS)
(19A)
TCH8431/19A:
HMPREF0837_RS06415 (xerS)
(4)
Xen35:
CXP32_RS05770 (xerS)

⊟Genome Viewer

TIGR4
D39
D39V
Hungary19A-6
EF3030

⊟Alignments

• alignment of orthologues:
  CLUSTAL format alignment by MAFFT L-INS-i (v7.505)
  
  
  TIGR4           MKREILLERIDKLKQLMPWYVLEYYQSKLAVPYSFTTLYEYLKEYDRFFSWVLESGISNA
  D39             MKREILLERIDKLKQLMPWYVLEYYQSKLAVPYSFTTLYEYLKEYDRFFSWVLESGISNA
  D39V            MKREILLERIDKLKQLMPWYVLEYYQSKLAVPYSFTTLYEYLKEYDRFFSWVLESGISNA
  Hungary19A-6    MKREILLERIDKLKQIMPWYVLEYYQSKLAVPYSFTTLYEYLKEYDRFFSWVLESGISNA
  EF3030          MKREILLERIDKLKQLMPWYVLEYYQSKLAVPYSFTTLYEYLKEYDRFFSWVLESGISNA
                  ***************:********************************************
  
  TIGR4           DKISDIPLSVLENMSKKDMESFILYLRERPLLNANTTKQGVSQTTINRTLSALSSLYKYL
  D39             DKISDIPLSVLENMSKKDMESFILYLRERPLLNANTTKQGVSQTTINRTLSALSSLYKYL
  D39V            DKISDIPLSVLENMSKKDMESFILYLRERPLLNANTTKQGVSQTTINRTLSALSSLYKYL
  Hungary19A-6    DKMSDIPLSVLENMSKKDMESFILYLRERPLLNANTTKQGVSQTTINRTLSALSSLYKYL
  EF3030          DKISDIPLSVLENMSKKDMESFILYLRERPLLNANTTKQGVSQTTINRTLSALSSLYKYL
                  **:*********************************************************
  
  TIGR4           TEEVENDQGEPYFYRNVMKKVSTKKKKETLAARAENIKQKLFLGDETEGFLTYIDQEHPQ
  D39             TEEVENDQGEPYFYRNVMKKVSTKKKKETLAARAENIKQKLFLGDETEGFLTYIDQEHPQ
  D39V            TEEVENDQGEPYFYRNVMKKVSTKKKKETLAARAENIKQKLFLGDETEGFLTYIDQEHPQ
  Hungary19A-6    TEEVENDQGEPYFYRNVMKKVSTKKKKETLAARAENIKQKLFLGDETEGFLTYIDQEYPQ
  EF3030          TEEVENDQGEPYFYRNVMKKVSTKKKKETLAARAENIKQKLFLGDETAGFLTYIDQEHPQ
                  *********************************************** *********:**
  
  TIGR4           QLSNRALSSFNKNKERDLAIIALLLASGVRLSEAVNLDLRDLNLKMMVIDVTRKGCKRDS
  D39             QLSNRALSSFNKNKERDLAIIALLLASGVRLSEAVNLDLRDLNLKMMVIDVTRKGGKRDS
  D39V            QLSNRALSSFNKNKERDLAIIALLLASGVRLSEAVNLDLRDLNLKMMVIDVTRKGGKRDS
  Hungary19A-6    QLSNRALSSFNKNKERDLAIIALLLASGVRLSEAVNLDLRDLNLKMMVIDVTRKGGKRDS
  EF3030          QLSNRALSSFNKNKERDLAIIALLLASGVRLSEAVNLDLRDLNLKMMVIDVTRKGGKRDS
                  ******************************************************* ****
  
  TIGR4           VNVAAFAKPYLENYLAIRNQRYKTEKTDTALFLTLYRGVPNRIDASSVEKMVAKYSEDFK
  D39             VNVAAFAKPYLENYLAIRNQRYKTEKTDTALFLTLYRGVPNRIDASSVEKMVAKYSEDFK
  D39V            VNVAAFAKPYLENYLAIRNQRYKTEKTDTALFLTLYRGVPNRIDASSVEKMVAKYSEDFK
  Hungary19A-6    VNVAAFAKPYLENYLAIRNQRYKTEKIDTALFLTLYRGVPNRIDASSVEKMVAKYSEDFK
  EF3030          VNVAAFAKPYLENYLAIRNQRYKTEKTDTALFLTLYRGVPNRIDASSVEKMVAKYSEDFK
                  ************************** *********************************
  
  TIGR4           VRVTPHKLRHTLATRLYDATKSQVLVSHQLGHASTQVTDLYTHIVSDEQKNALDSL
  D39             VRVTPHKLRHTLATRLYDATKSQVLVSHQLGHASTQVTDLYTHIVNDEQKNALDSL
  D39V            VRVTPHKLRHTLATRLYDATKSQVLVSHQLGHASTQVTDLYTHIVNDEQKNALDSL
  Hungary19A-6    VRVTPHKLRHTLATRLYDATKSQVLVSHQLGHASTQVTDLYTHIVNDEQKNALDSL
  EF3030          VRVTPHKLRHTLATRLYDATKSQVLVSHQLGHASTQVTDLYTHIVNDEQKNALDSL
                  *********************************************.**********