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PangenomeTIGR4
serotype 4
D39serotype 2
D39Vserotype 2
Hungary19A-6serotype 19A
EF3030serotype 19F
670-6Bserotype 6B
6A-10serotype 6A
70585serotype 5
A026serotype 19F
A66serotype 3
AP200serotype 11A
ASP0581serotype 12F
ATCC 49619serotype 19F
ATCC 700669serotype 23F
BVJ1JLserotype 1
CGSP14serotype 14
G54serotype 19F
HU-OHserotype 3
Hu15serotype 19A
Hu17serotype 19A
INV104serotype 1
INV200serotype 14
JJAserotype 14
MDRSPN001serotype 19F
NCTC7466serotype 2
NU83127serotype 4
OXC141serotype 3
P1031serotype 1
R6serotype 2
SP49serotype 19A
SPN032672serotype 1
SPN034156serotype 3
SPN034183serotype 3
SPN994038serotype 3
SPN994039serotype 3
SPNA45serotype 3
ST556serotype 19F
TCH8431/19Aserotype 19A
Taiwan19F-14serotype 19F
Xen35serotype 4
gamPNI0373serotype 1
⊟Summary[edit | edit source]
- pan ID?: PNEUPAN002453000
- symbol?: lacT
- synonym:
- description?: transcription antiterminator
- transcription antiterminator
- transcription antiterminator LacT
- transcription antiterminator LacT 2
- Transcription antiterminator LicT
- Beta-glucoside bgl operon antiterminator, BglG family
- Antiterminator protein
- Beta-glucoside bgl operon antiterminator LacT, BglG family
- CAT RNA binding domain protein
- PRD domain protein
- Transcriptional antiterminator
descriptions from strain specific annotations:
- strand?: -
- coordinates?: 3042612..3043448
- occurrence?: in 100% of 41 strains
⊟Orthologs[edit | edit source]
⊟Genome Viewer[edit | edit source]
| TIGR4 | |
| D39 | |
| D39V | |
| Hungary19A-6 | |
| EF3030 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.505)
TIGR4 MYRILNPMNHNVSLVRNDKGEEVIVIGKGIAFGKKKGDLIAENQVEKIFRMKTEESRENF
D39 MYRILNPMNHNVSLVRNDKGEEVIIIGKGIAFGKRKGDLIAENQVEKIFRMKTEESRENF
D39V MYRILNPMNHNVSLVRNDKGEEVIIIGKGIAFGKRKGDLIAENQVEKIFRMKTEESRENF
Hungary19A-6 MYRILNPMNHNVSLVRNDKGEEVIVIGKGIAFGKKKGDLIAENQVEKIFRMKTEESRENF
EF3030 MYRILNPMNHNVSLVRNDKGEEVIVIGKGIAFGKKKGDLIAENHVEKIFRMKTEESRENF
************************:*********:********:****************
TIGR4 MALLKDVPLDFITVTYEIIDKLSKKYHYPIQEYLYVTLTDHIYCSYQALTQGRYKDSNLP
D39 MALLKDVPLDFITVTYEIIDKLSKKYHYPIQEYLYVTLTDHIYCSYQALTQGRYKDSNLP
D39V MALLKDVPLDFITVTYEIIDKLSKKYHYPIQEYLYVTLTDHIYCSYQALTQGRYKDSNLP
Hungary19A-6 MALLKDVPLDFITVTYEIIDKLSKKYHYPIQEYLYVTLTDHIYCSYQALTQGRYKDSNLP
EF3030 MALLKDVPLDFITVTYEIIDKLSKKYHYPIQEYLYVTLTDHIYCSYQALTQGRYKDSNLP
************************************************************
TIGR4 DISAKYPVAFQIANEAFEIYRQKLADHFPEDEIIRIAYHFINAEGENEVELVESIDKRKE
D39 DISAKYPVAFQIANEAFEIYRQKLADHFPEDEIIRIAYHFINAEGENEVELVESIDKRKE
D39V DISAKYPVAFQIANEAFEIYRQKLADHFPEDEIIRIAYHFINAEGENEVELVESIDKRKE
Hungary19A-6 DISAKYPVAFQIANEAFEIYRQKLADHFPEDEIIRIAYHFINAEGENEVELVESIDKRKE
EF3030 DISAKYPVAFQIANEAFEIYRQKLADHFPEDEIIRIAYHFINAEGENEVELVESIDKRKE
************************************************************
TIGR4 ILRNVEEVLTDYAIQRTKKNNHFYDRFMIHLNYFLDYLDRSRDDNQSLLDMEDHIKQSYP
D39 ILRNVEEVLKGYAIQRTKKNNHFYDRFMIHLNYFLDYLDRSRDDNQSLLDMEDHIKQSYP
D39V ILRNVEEVLKGYAIQRTKKNNHFYDRFMIHLNYFLDYLDRSRDDNQSLLDMEDHIKQSYP
Hungary19A-6 ILRNVEEVLTDYAIQRTKKNNHFYDRFMIHLNYFLDYLDRSRDDNQSLLDMEDHIKQSYP
EF3030 ILRNVEEVLTDYAIQRTKKNNHFYDRFMIHLNYFLDYLDRSRDDNQSLLDMEDHIKQSYP
*********..*************************************************
TIGR4 KAFEIGSKIYDVITQHTGLDLYKSERVYLVLHIQRLLS
D39 KAFEIGSKIYDVITQHTGLDLYKSERVYLVLHIQRLLS
D39V KAFEIGSKIYDVITQHTGLDLYKSERVYLVLHIQRLLS
Hungary19A-6 KAFEIGSKIYDVITQHTGLDLYKSERVYLVLHIQRLLS
EF3030 KAFEIGSKIYDVITQHTGLDLYKSERVYLVLHIQRLLS
**************************************