PangenomeTIGR4

serotype 4

D39

serotype 2

D39V

serotype 2

Hungary19A-6

serotype 19A

EF3030

serotype 19F

670-6B

serotype 6B

6A-10

serotype 6A

70585

serotype 5

A026

serotype 19F

A66

serotype 3

AP200

serotype 11A

ASP0581

serotype 12F

ATCC 49619

serotype 19F

ATCC 700669

serotype 23F

BM6001

serotype 19F

BVJ1JL

serotype 1

CGSP14

serotype 14

G54

serotype 19F

HU-OH

serotype 3

Hu15

serotype 19A

Hu17

serotype 19A

INV104

serotype 1

INV200

serotype 14

JJA

serotype 14

MDRSPN001

serotype 19F

NCTC7465

serotype 1

NCTC7466

serotype 2

NU83127

serotype 4

OXC141

serotype 3

P1031

serotype 1

R6

serotype 2

SP49

serotype 19A

SPN032672

serotype 1

SPN034156

serotype 3

SPN034183

serotype 3

SPN994038

serotype 3

SPN994039

serotype 3

SPNA45

serotype 3

ST556

serotype 19F

TCH8431/19A

serotype 19A

Taiwan19F-14

serotype 19F

Xen35

serotype 4

gamPNI0373

serotype 1

⊟Summary

• pan ID^?: PNEUPAN002457000
• symbol^?: gyrA
• synonym:
• description^?: DNA gyrase subunit A

  descriptions from strain specific annotations:

  • DNA gyrase subunit A
  • DNA gyrase, A subunit
  • Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit
• strand^?: -
• coordinates^?: 3140410..3142878
• occurrence^?: in 100% of 43 strains

⊟Orthologs

(4)^?
TIGR4:
SP_RS05975 (gyrA)
(2)
D39:
SPD_RS05765 (gyrA)
(2)
D39V:
SPV_RS05755 (gyrA)
(19A)
Hungary19A-6:
SPH_RS06465 (gyrA)
(19F)
EF3030:
EF3030_RS05350 (gyrA)
(6B)^?
670-6B:
SP670_RS05235 (gyrA)
(6A)
6A-10:
HKM25_RS05720 (gyrA)
(5)
70585:
SP70585_RS06305 (gyrA)
(19F)
A026:
T308_RS04725 (gyrA)
(3)
A66:
A66_RS05505 (gyrA)
(11A)
AP200:
SPAP_RS06155 (gyrA)
(12F)
ASP0581:
EL334_RS06310 (gyrA)
(19F)
ATCC 49619:
EL263_RS05955 (gyrA)
(23F)
ATCC 700669:
SPN23F_RS05660 (gyrA)
(19F)
BM6001:
ODS73_RS06390 (gyrA)
(1)
BVJ1JL:
JN057_RS06085 (gyrA)
(14)
CGSP14:
SPCG_RS05605 (gyrA)
(19F)
G54:
SPG_RS05600 (gyrA)
(1)
gamPNI0373:
HMPREF1038_RS06020 (gyrA)
(3)
HU-OH:
EL271_RS06125 (gyrA)
(19A)
Hu15:
SPNHU15_RS05930 (gyrA)
(19A)
Hu17:
SPNHU17_RS05855 (gyrA)
(1)
INV104:
INV104_RS06050 (gyrA)
(14)
INV200:
SPNINV200_RS05440 (gyrA)
(14)
JJA:
SPJ_RS05645 (gyrA)
(19F)
MDRSPN001:
MDRSPN_RS04325 (gyrA)
(1)
NCTC7465:
AT689_RS07825 (gyrA)
(2)
NCTC7466:
DQM66_RS05765 (gyrA)
(4)
NU83127:
EL277_RS06000 (gyrA)
(3)
OXC141:
SPNOXC_RS05885 (gyrA)
(1)
P1031:
SPP_RS06225 (gyrA)
(2)
R6:
SPR_RS05485 (gyrA)
(19A)
SP49:
BMJ42_RS06435 (gyrA)
(1)
SPN032672:
SPN032672_RS00920 (gyrA)
(3)
SPN034156:
SPN034156_RS00940 (gyrA)
(3)
SPN034183:
SPN034183_RS05900 (gyrA)
(3)
SPN994038:
SPN994038_RS05805 (gyrA)
(3)
SPN994039:
SPN994039_RS05810 (gyrA)
(3)
SPNA45:
SPNA45_RS05450 (gyrA)
(19F)
ST556:
MYY_RS05200 (gyrA)
(19F)
Taiwan19F-14:
SPT_RS04985 (gyrA)
(19A)
TCH8431/19A:
HMPREF0837_RS06150 (gyrA)
(4)
Xen35:
CXP32_RS06040 (gyrA)

⊟Genome Viewer

TIGR4
D39
D39V
Hungary19A-6
EF3030

⊟Alignments

• alignment of orthologues:
  CLUSTAL format alignment by MAFFT L-INS-i (v7.505)
  
  
  TIGR4           MQDKNLVNVNLTKEMKASFIDYAMSVIVARALPDVRDGLKPVHRRILYGMNELGVTPDKP
  D39             MQDKNLVNVNLTKEMKASFIDYAMSVIVARALPDVRDGLKPVHRRILYGMNELGVTPDKP
  D39V            MQDKNLVNVNLTKEMKASFIDYAMSVIVARALPDVRDGLKPVHRRILYGMNELGVTPDKP
  Hungary19A-6    MQDKNLVNVNLTKEMKASFIDYAMSVIVARALPDVRDGLKPVHRRILYGMNELGVTPDKP
  EF3030          MQDKNLVNVNLTKEMKASFIDYAMSVIVARALPDVRDGLKPVHRRILYGMNELGVTPDKP
                  ************************************************************
  
  TIGR4           HKKSARITGDVMGKYHPHGDSSIYEAMVRMAQWWSYRYMLVDGHGNFGSMDGDSAAAQRY
  D39             HKKSARITGDVMGKYHPHGDSSIYEAMVRMAQWWSYRYMLVDGHGNFGSMDGDSAAAQRY
  D39V            HKKSARITGDVMGKYHPHGDSSIYEAMVRMAQWWSYRYMLVDGHGNFGSMDGDSAAAQRY
  Hungary19A-6    HKKSARITGDVMGKYHPHGDSSIYEAMVRMAQWWSYRYMLVDGHGNFGSMDGDSAAAQRY
  EF3030          HKKSARITGDVMGKYHPHGDSSIYEAMVRMAQWWSYRYMLVDGHGNFGSMDGDSAAAQRY
                  ************************************************************
  
  TIGR4           TEARMSKIALEMLRDINKNTVDFVDNYDANEREPLVLPARFPNLLVNGATGIAVGMATNI
  D39             TEARMSKIALEMLRDINKNTVDFVDNYDANEREPLVLPARFPNLLVNGATGIAVGMATNI
  D39V            TEARMSKIALEMLRDINKNTVDFVDNYDANEREPLVLPARFPNLLVNGATGIAVGMATNI
  Hungary19A-6    TEARMSKIALEMLRDINKNTVDFVDNYDANEREPLVLPARFPNLLVNGATGIAVGMATNI
  EF3030          TEARMSKIALEMLRDINKNTVDFVDNYDANEREPLVLPARFPNLLVNGATGIAVGMATNI
                  ************************************************************
  
  TIGR4           PPHNLGETIDAVKLVMDNPEVTTKDLMEVLPGPDFPTGALVMGKSGIHKAYETGKGSIVL
  D39             PPHNLGETIDAVKLVMDNPEVTTKDLMEVLPGPDFPTGALVMGKSGIHKAYETGKGSIVL
  D39V            PPHNLGETIDAVKLVMDNPEVTTKDLMEVLPGPDFPTGALVMGKSGIHKAYETGKGSIVL
  Hungary19A-6    PPHNLGETIDAVKLVMDNPEVTTKDLMEVLPGPDFPTGALVMGKSGIHKAYETGKGSIVL
  EF3030          PPHNLGETIDAVKLVMDNPEVTTKDLMEVLPGPDFPTGALVMGKSGIHKAYETGKGSIVL
                  ************************************************************
  
  TIGR4           RSRTEIETTKTGRERIVVTEFPYMVNKTKVHEHIVRLVQEKRIEGITAVRDESNREGVRF
  D39             RSRTEIETTKTGRERIVVTEFPYMVNKTKVHEHIVRLVQEKRIEGITAVRDESNREGVRF
  D39V            RSRTEIETTKTGRERIVVTEFPYMVNKTKVHEHIVRLVQEKRIEGITAVRDESNREGVRF
  Hungary19A-6    RSRTEIETTKTGRERIVVTEFPYMVNKTKVHEHIVRLVQEKRIEGITAVRDESNREGVRF
  EF3030          RSRTEIETTKTGRERIVVTEFPYMVNKTKVHEHIVRLVQEKRIEGITAVRDESNREGVRF
                  ************************************************************
  
  TIGR4           VIEVKRDASANVILNNLFKMTQMQTNFGFNMLAIQNGIPKILSLRQILDAYIEHQKEVVV
  D39             VIEVKRDASANVILNNLFKMTQMQTNFGFNMLAIQNGIPKILSLRQILDAYIEHQKEVVV
  D39V            VIEVKRDASANVILNNLFKMTQMQTNFGFNMLAIQNGIPKILSLRQILDAYIEHQKEVVV
  Hungary19A-6    VIEVKRDASANVILNNLFKMTQMQTNFGFNMLAIQNGIPKILSLRQILDAYIEHQKEVVV
  EF3030          VIEVKRDASANVILNNLFKMTQMQTNFGFNMLAIQNGIPKILSLRQILDAYIEHQKEVVV
                  ************************************************************
  
  TIGR4           RRTRFDKEKAEARAHILEGLLIALDHIDEVIRIIRASETDAEAQAELMSKFKLSERQSQA
  D39             RRTRFDKEKAEARAHILEGLLIALDHIDEVIRIIRASETDAEAQAELMSKFKLSERQSQA
  D39V            RRTRFDKEKAEARAHILEGLLIALDHIDEVIRIIRASETDAEAQAELMSKFKLSERQSQA
  Hungary19A-6    RRTRFDKEKAEARAHILEGLLIALDHIDEVIRIIRASETDAEAQAELMSKFKLSERQSQA
  EF3030          RRTRFDKEKAEARAHILEGLLIALDHIDEVIRIIRASETDAEAQAELMSKFKLSERQSQA
                  ************************************************************
  
  TIGR4           ILDMRLRRLTGLERDKIQSEYDDLLALIADLADILAKPERVSQIIKDELDEVKRKFSDKR
  D39             ILDMRLRRLTGLERDKIQSEYDDLLALIADLADILAKPERVSQIIKDELDEVKRKFSDKR
  D39V            ILDMRLRRLTGLERDKIQSEYDDLLALIADLADILAKPERVSQIIKDELDEVKRKFSDKR
  Hungary19A-6    ILDMRLRRLTGLERDKIQSEYDDLLALIADLADILAKPERVSQIIKDELDEVKRKFSDKR
  EF3030          ILDMRLRRLTGLERDKIQSEYDDLLALIADLADILAKPERVSQIIKDELDEVKRKFSDKR
                  ************************************************************
  
  TIGR4           RTELMIGQVLSLEDEDLIEESDVLITLSNRGYIKRLDQDEFTAQKRGGRGVQGTGVKDDD
  D39             RTELMVGQVLSLEDEDLIEESDVLITLSNRGYIKRLDQDEFTAQKRGGRGVQGTGVKDDD
  D39V            RTELMVGQVLSLEDEDLIEESDVLITLSNRGYIKRLDQDEFTAQKRGGRGVQGTGVKDDD
  Hungary19A-6    RTELMVGQILSLEDEDLIEESDVLITLSNRGYIKRLDQDEFTAQKRGGRGVQGTGVKDDD
  EF3030          RTELMVGQILSLEDEDLIEESDVLITLSNRGYIKRLDQDEFTAQKRGGRGVQGTGVKDDD
                  *****:**:***************************************************
  
  TIGR4           FVRELVSTSTHDHLLFFTNKGRVYRLKGYEIPEYGRTAKGLPVVNLLKLDEDESIQTVIN
  D39             FVRELVSTSTHDHLLFFTNKGRVYRLKGYEIPEYGRTAKGLPVVNLLKLDEDESIQTVIN
  D39V            FVRELVSTSTHDHLLFFTNKGRVYRLKGYEIPEYGRTAKGLPVVNLLKLDEDESIQTVIN
  Hungary19A-6    FVRELVSTSTHDHLLFFTNKGRVYRLKGYEIPEYGRTAKGLPVVNLLKLDEDESIQTVIN
  EF3030          FVRELVSTSTHDHLLFFTNKGRVYRLKGYEIPEYGRTAKGLPVVNLLKLDEDESIQTVIN
                  ************************************************************
  
  TIGR4           VESDRSDDAYLFFTTRHGIVKRTSVKEFANIRQNGLKALNLKDEDELINVLLAEGDMDII
  D39             VESDRSDDAYLFFTTRHGIVKRTSVKEFANIRQNGLKALNLKDEDELINVLLAEGDMDII
  D39V            VESDRSDDAYLFFTTRHGIVKRTSVKEFANIRQNGLKALNLKDEDELINVLLAEGDMDII
  Hungary19A-6    VESDRSDDAYLFFTTRHGIVKRTSVKEFANIRQNGLKALNLKDEDELINVLLAEGDMDII
  EF3030          VESDRSDDAYLFFTTRHGIVKRTSVKEFANIRQNGLKALNLKDEDELINVLLTEGDMDII
                  ****************************************************:*******
  
  TIGR4           IGTKFGYAVRFNQSAVRGMSRIATGVKGVNLREGDTVVGASLITDQDEVLIITEKGYGKR
  D39             IGTKFGYAVRFNQSAVRGMSRIATGVKGVNLREGDTVVGASLITDQDEVLIITEKGYGKR
  D39V            IGTKFGYAVRFNQSAVRGMSRIATGVKGVNLREGDTVVGASLITDQDEVLIITEKGYGKR
  Hungary19A-6    IGTKFGYAVRFNQSAVRGMSRIATGVKGVNLREGDTVVGASLITDQDEVLIITEKGYGKR
  EF3030          IGTKFGYAVRFNQSAVRGMSRIATGVKGVNLREGDTVVGASLITDQDEVLIITEKGYGKR
                  ************************************************************
  
  TIGR4           TVATEYPTKGRGGKGMQTAKITEKNGLLAGLMTVQGDEDLMIITDTGVMIRTNLANISQT
  D39             TVATEYPTKGRGGKGMQTAKITEKNGLLAGLMTVQGDEDLMIITDTGVMIRTNLANISQT
  D39V            TVATEYPTKGRGGKGMQTAKITEKNGLLAGLMTVQGDEDLMIITDTGVMIRTNLANISQT
  Hungary19A-6    TVATEYPTKGRGGKGMQTAKITEKNGLLAGLMTVQGDEDLMIITDTGVMIRTNLANISQT
  EF3030          TVATEYPTKGRGGKGMQTAKITEKNGLLAGLMTVQGDEDLMIITDTGVMIRTNLANISQT
                  ************************************************************
  
  TIGR4           GRATMGVKVMRLDQDAQIVTFTTVAVAEKEEVGTENETEGEA
  D39             GRATMGVKVMRLDQDAQIVTFTTVAVAEKEEVGTENETEGEA
  D39V            GRATMGVKVMRLDQDAQIVTFTTVAVAEKEEVGTENETEGEA
  Hungary19A-6    GRATMGVKVMRLDQDAQIVTFTTVAVAEKEEVGTENETEGEA
  EF3030          GRATMGVKVMRLDQDAQIVTFTTVAVAEKEEVGTENETEGEA
                  ******************************************