Jump to navigation
Jump to search
PangenomeTIGR4
serotype 4
D39serotype 2
D39Vserotype 2
Hungary19A-6serotype 19A
EF3030serotype 19F
670-6Bserotype 6B
6A-10serotype 6A
70585serotype 5
A026serotype 19F
A66serotype 3
AP200serotype 11A
ASP0581serotype 12F
ATCC 49619serotype 19F
ATCC 700669serotype 23F
BVJ1JLserotype 1
CGSP14serotype 14
G54serotype 19F
HU-OHserotype 3
Hu15serotype 19A
Hu17serotype 19A
INV104serotype 1
INV200serotype 14
JJAserotype 14
MDRSPN001serotype 19F
NCTC7466serotype 2
NU83127serotype 4
OXC141serotype 3
P1031serotype 1
R6serotype 2
SP49serotype 19A
SPN032672serotype 1
SPN034156serotype 3
SPN034183serotype 3
SPN994038serotype 3
SPN994039serotype 3
SPNA45serotype 3
ST556serotype 19F
TCH8431/19Aserotype 19A
Taiwan19F-14serotype 19F
Xen35serotype 4
gamPNI0373serotype 1
⊟Summary[edit | edit source]
- pan ID?: PNEUPAN002472000
- symbol?: lacE-2
- synonym:
- description?: lactose-specific PTS transporter subunit EIIC
- lactose-specific PTS transporter subunit EIIC
- PTS system, lactose-specific IIC component
- putative lactose-specific phosphotransferase system (PTS), IIBC component 2
- PTS lactose transporter subunit IIBC
- PTS system lactose-specific EIICB component
- PTS system, lactose-specific IIBC components
- Lactose-specific PTS IIBC components
- Phosphotransferase system cellobiose-specific component IIC
- PTS system, IIBC component
- PTS system, lactose-specific IIA component (EC 2.7.1.69) (pseudogene)
- PTS system, lactose-specific IIBC
- PTS system, lactose-specific IIBC component
- PTS system, lactose-specific IIB component / PTS system, lactose-specific IIC component
- pts system lactose-specific eiicb component (eiicb-lac) (eii-lac)
- PTS system lactose-specific transporter subunit IIBC
- PTS system lactose-specific transporter subunits IICB
descriptions from strain specific annotations:
- strand?: -
- coordinates?: 3040558..3042257
- occurrence?: in 100% of 41 strains
⊟Orthologs[edit | edit source]
⊟Genome Viewer[edit | edit source]
| TIGR4 | |
| D39 | |
| D39V | |
| Hungary19A-6 | |
| EF3030 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.505)
TIGR4 MQNRPIIIGVTGGSGGGKTSVSRAILSHFPDEKISMIEHDSYYKDQSHLTFEERVKTNYD
D39 MQNRPIIIGVTGGSGGGKTSVSRAILSHFPDEKISMIEHDSYYKDQSHLTFEERVKTNYD
D39V MQNRPIIIGVTGGSGGGKTSVSRAILSHFPDEKISMIEHDSYYKDQSHLTFEERVKTNYD
Hungary19A-6 MQNRPIIIGVTGGSGGGKTSVSRAILSHFPDEKISMIEHDSYYKDQSHLTFEERVKTNYD
EF3030 MQNRPIIIGVTGGSGGGKTSVSRAILSHFPDEKISMIEHDSYYKDQSHLTFEERVKTNYD
************************************************************
TIGR4 HPFAFDTDLMIEQIKELLAGRPVDIPTYDYTEHTRSSKTYRQEPQDVFIVEGILVLEDKR
D39 HPFAFDTDLMIEQIKELLAGRPVDIPTYDYTEHTRSSKTYRQEPQDVFIVEGILVLEDKR
D39V HPFAFDTDLMIEQIKELLAGRPVDIPTYDYTEHTRSSKTYRQEPQDVFIVEGILVLEDKR
Hungary19A-6 HPFAFDTDLMIEQIKELLAGRPVDIPTYDYTEHTRSSKTYRQEPQDVFIVEGILVLEDKR
EF3030 HPFAFDTDLMIEQIKELLAGRPVDIPTYDYTEHTRSSKTYRQEPQDVFIVEGILVLEDKR
************************************************************
TIGR4 LRDLMDIKIFVDTDDDVRIIRRIKRDMEERGRSLDSVINQYLGVVKPMYHQFIESTKRYA
D39 LRDLMDIKIFVDTDDDVRIIRRIKRDMEERGRSLDSVINQYLGVVKPMYHQFIESTKRYA
D39V LRDLMDIKIFVDTDDDVRIIRRIKRDMEERGRSLDSVINQYLGVVKPMYHQFIESTKRYA
Hungary19A-6 LRDLMDIKIFVDTDDDVRIIRRIKRDMEERGRSLDSVINQYLGVVKPMYHQFIESTKRYA
EF3030 LRDLMDIKIFVDTDDDVRIIRRIKRDMEERGRSLDSVINQYLGVVKPMYHQFIESTKRYA
************************************************************
TIGR4 DIVIPEGVSNTVAIDLLTTKIAKILEEARNSK
D39 DIVIPEGVSNTVAIDLLTTKIAKILEEARNSK
D39V DIVIPEGVSNTVAIDLLTTKIAKILEEARNSK
Hungary19A-6 DIVIPEGVSNTVAIDLLTTKIAKILEEARNSK
EF3030 DIVIPEGVSNTVAIDLLTTKIAKILEEARNSK
********************************