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PangenomeTIGR4
serotype 4
D39serotype 2
D39Vserotype 2
Hungary19A-6serotype 19A
EF3030serotype 19F
670-6Bserotype 6B
6A-10serotype 6A
70585serotype 5
A026serotype 19F
A66serotype 3
AP200serotype 11A
ASP0581serotype 12F
ATCC 49619serotype 19F
ATCC 700669serotype 23F
BVJ1JLserotype 1
CGSP14serotype 14
G54serotype 19F
HU-OHserotype 3
Hu15serotype 19A
Hu17serotype 19A
INV104serotype 1
INV200serotype 14
JJAserotype 14
MDRSPN001serotype 19F
NCTC7466serotype 2
NU83127serotype 4
OXC141serotype 3
P1031serotype 1
R6serotype 2
SP49serotype 19A
SPN032672serotype 1
SPN034156serotype 3
SPN034183serotype 3
SPN994038serotype 3
SPN994039serotype 3
SPNA45serotype 3
ST556serotype 19F
TCH8431/19Aserotype 19A
Taiwan19F-14serotype 19F
Xen35serotype 4
gamPNI0373serotype 1
⊟Summary[edit | edit source]
- pan ID?: PNEUPAN002478000
- symbol?: lacB
- synonym:
- description?: galactose-6-phosphate isomerase subunit LacB
- galactose-6-phosphate isomerase subunit LacB
- galactose-6-phosphate isomerase, LacB subunit
- galactose-6-phosphate isomerase LacB subunit 1
- galactose-6-phosphate isomerase
- Galactose-6-phosphate isomerase, LacB subunit (EC 5.3.1.26)
- Galactose-6-phosphate isomerase LacB subunit
- Ribose 5-phosphate isomerase RpiB
descriptions from strain specific annotations:
- strand?: -
- coordinates?: 3047694..3048209
- occurrence?: in 100% of 41 strains
⊟Orthologs[edit | edit source]
SPN034156:
SPN034156_RS00820 (lacB)
SPN034183:
SPN034183_RS05780 (lacB)
SPN994038:
SPN994038_RS05685 (lacB)
⊟Genome Viewer[edit | edit source]
| TIGR4 | |
| D39 | |
| D39V | |
| Hungary19A-6 | |
| EF3030 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.505)
D39 MEDDLNYENLMDDVTEAIKKFNLVIFIGAGVSIAQGYPNWNNYIEHLIKYWQGQVLSVSG
D39V MEDDLNYENLMDDVTEAIKKFNLVIFIGAGVSIAQGYPNWNNYIEHLIKYWQGQVLSVSG
EF3030 MEDDLNYENLMDDVTEAIKKFNLVIFIGAGVSIAQGYPNWNNYIEHLIKYWQGQVLSVSG
************************************************************
D39 EKRLGREHHVVFDLISKSSISNKRKVDLVNYELKKVFGEDFEKRRLDFEKGYFKNLLPYS
D39V EKRLGREHHVVFDLISKSSISNKRKVDLVNYELKKVFGEDFEKRRLDFEKGYFKNLLPYS
EF3030 EKRLGREHHVVFDLISKSSISNKRKVDLVNYELKKVFGEDFEKRRLDFEKGYFKNLLPYS
************************************************************
D39 IVNQTVESLASLNAIFITSNYDYEIENHIKRLKNAVVTINDLNEFTKNKNGKLQFGDVLH
D39V IVNQTVESLASLNAIFITSNYDYEIENHIKRLKNAVVTINDLNEFTKNKNGKLQFGDVLH
EF3030 IVNQTVESLASLNAIFITSNYDYEIENHIKRLKNAVVTINDLNEFTKNKNGKLQFGDVLH
************************************************************
D39 IHGTPDCDVKYFVSSSADYSKTYLKNRENFENLVTWFKETKPTVLFVGAGLEEDEILSLL
D39V IHGTPDCDVKYFVSSSADYSKTYLKNRENFENLVTWFKETKPTVLFVGAGLEEDEILSLL
EF3030 IHGTPDCDVKYFVSSSADYSKTYLKNRENFENLVTWFKETKPTVLFIGAGLEEDEILSLL
**********************************************:*************
D39 CKDSKNYALMKSENTGNQRVDEHYRGVVEGFFSSENHTQIIWYGDEFEKLPLFVKKLVAD
D39V CKDSKNYALMKSENTGNQRVDEHYRGVVEGFFSSENHTQIIWYGDEFEKLPLFVKKLVAD
EF3030 CKDSKNYALMKSENTGNQRVDEHYRGVVEGFFSSENHTQIIWYGDEFEKLPLFVKKLVAD
************************************************************
D39 INEKLGTHDFYNQWNNLLNPSINQEEYNKNLDSISNDFKYLSSVLDKVIENDNNQLDQLM
D39V INEKLGTHDFYNQWNNLLNPSINQEEYNKNLDSISNDFKYLSSVLDKVIENDNNQLDQLM
EF3030 INEKLGTHDFYNQWNNLLNPSINQEEYNKNLDSISNDFKYLSSVLDKVIENDNNQLDQLM
************************************************************
D39 LNALLRSETLTVIKKNFVLAFWRFIVKNIEKLSDNEWDVIYKIIYEGSQNYFIDDVFFVY
D39V LNALLRSETLTVIKKNFVLAFWRFIVKNIEKLSDNEWDVIYKIIYEGSQNYFIDDVFFVY
EF3030 LNALLRSETLTVIKKNFVLVFWKFIVKNIEKLSDNEWDVIYKIIYEGSQNYFIDDVFFVY
*******************.**:*************************************
D39 NYAIDNKISSFTNNNKLNELREIISKDGYIVNSNFNKDKTLLGYWLVSAFEQQNRDLYIK
D39V NYAIDNKISSFTNNNKLNELREIISKDGYIVNSNFNKDKTLLGYWLVSAFEQQNRDLYIK
EF3030 NYAIDNKISSFTNNNKLNELREIISKDGYIVNSNFNKDKTLLGYWLVSAFEQQNRDLYIK
************************************************************
D39 EDSEVEVNLNYECVNKLMSILNNPEFLSYNYYSIEHQLKEYDVVKFLYELVKSKKLFIEE
D39V EDSEVEVNLNYECVNKLMSILNNPEFLSYNYYSIEHQLKEYDVVKFLYELVKSKKLFIEE
EF3030 EDSEVEVNLNYECVNKLMSILNNPEFLSYNYYSIEHQLKEYDVVKFLYELVKSKKLFIEE
************************************************************
D39 EKFLESDSEDLISTILIQKLLVQLDNEINLDLEFIKRLIDKIDFSNIHFGEELNTFIKEH
D39V EKFLESDSEDLISTILIQKLLVQLDNEINLDLEFIKRLIDKIDFSNIHFGEELNTFIKEH
EF3030 EKFLESDSEDLISTILIQKLLVQLDNEINLDLEFIKRLIDKIDFSNIHFGEELNTFIKEH
************************************************************
D39 RSIIREKNIEIPKKPYRNWISSLEGGFVSQFSYLTQENLVEYDESRVLEILVNAEKEQRG
D39V RSIIREKNIEIPKKPYRNWISSLEGGFVSQFSYLTQENLVEYDESRVLEILVNAEKEQRG
EF3030 RSIIREKNIEIPKKPYRNWISSLEGGFVSQFSYLTQENLVEYDESRVLEILVNAEKEQRG
************************************************************
D39 SSFLEEKTINETENFFITVLKESNEISKKVSDLLKNHIDDLYPKYKRLYVKIISFPEIEE
D39V SSFLEEKTINETENFFITVLKESNEISKKVSDLLKNHIDDLYPKYKRLYVKIISFPEIEE
EF3030 SSFLEEKTINETENFFITVLKESNEISKKVSDLLKNHIDDLYPKYKRLYVKIISFPEIEE
************************************************************
D39 NLRKIVREKYLKRFNKESFDSNDRKFFEYHIKQQNTDIDIFEKLLSINVNELSTPKGDNK
D39V NLRKIVREKYLKRFNKESFDSNDRKFFEYHIKQQNTDIDIFEKLLSINVNELSTPKGDNK
EF3030 NLRKIVREKYLKRFNKESFDSNDRKFFEYHIKQQNTDIDIFEKLLSINVNELSTPKGDNK
************************************************************
D39 QLDILHFINSEMGSYFQCLISLFINHSSYRDVIIQIINSVTDTDYREFAQGILLNEYNPN
D39V QLDILHFINSEMGSYFQCLISLFINHSSYRDVIIQIINSVTDTDYREFAQGILLNEYNPN
EF3030 QLDILHFINSEMGSYFQCLISLFINHSSYRDVIIQIINSVTDTDYREFAQGILLNEYNPN
************************************************************
D39 RINVTYNTFLGFAYYHSIITIEAADVFTDVVRDILNKKIEDNQILNKVYLVALERVDPTI
D39V RINVTYNTFLGFAYYHSIITIEAADVFTDVVRDILNKKIEDNQILNKVYLVALERVDPTI
EF3030 RINVTYNTFLGFAYYHSTITIEAADVFTDVVRDILNKKIEDNQILNKVYLVALERVDPTI
***************** ******************************************
D39 ESFSLSKNNYSQMINIIFTGDYEFRYSKEWLGALFKFDSSANYLVTIFYLLYNENLKKNR
D39V ESFSLSKNNYSQMINIIFTGDYEFRYSKEWLGALFKFDSSANYLVTIFYLLYNENLKKNR
EF3030 ESFSLSKNNYSQMINIIFTGDYEFRYSKEWLGALFKFDSSANYLVTIFYLLYNENLKKNR
************************************************************
D39 FALFIEELSDYLTTYNQKLSLRGMNYKLNHEELNNFDLLKKMFLKLMETDKIENDIFYLD
D39V FALFIEELSDYLTTYNQKLSLRGMNYKLNHEELNNFDLLKKMFLKLMETDKIENDIFYLD
EF3030 FALFIEELSDYLTTYNQKLSLRGMNYKLNHEELNNFDLLKKMFLKLMETDKIENDIFYLD
************************************************************
D39 GIKSILPLLSLDDRRNVLQHIQKQNNCPPPEIEELQRIIVN
D39V GIKSILPLLSLDDRRNVLQHIQKQNNCPPPEIEELQRIIVN
EF3030 GIKSILPLLSLDDRRNVLQHIQKQNNCPPPEIEELQRIIVN
*****************************************