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PangenomeTIGR4
serotype 4
D39serotype 2
D39Vserotype 2
Hungary19A-6serotype 19A
EF3030serotype 19F
670-6Bserotype 6B
6A-10serotype 6A
70585serotype 5
A026serotype 19F
A66serotype 3
AP200serotype 11A
ASP0581serotype 12F
ATCC 49619serotype 19F
ATCC 700669serotype 23F
BM6001serotype 19F
BVJ1JLserotype 1
CGSP14serotype 14
G54serotype 19F
HU-OHserotype 3
Hu15serotype 19A
Hu17serotype 19A
INV104serotype 1
INV200serotype 14
JJAserotype 14
MDRSPN001serotype 19F
NCTC7465serotype 1
NCTC7466serotype 2
NU83127serotype 4
OXC141serotype 3
P1031serotype 1
R6serotype 2
SP49serotype 19A
SPN032672serotype 1
SPN034156serotype 3
SPN034183serotype 3
SPN994038serotype 3
SPN994039serotype 3
SPNA45serotype 3
ST556serotype 19F
TCH8431/19Aserotype 19A
Taiwan19F-14serotype 19F
Xen35serotype 4
gamPNI0373serotype 1
⊟Summary[edit | edit source]
- pan ID?: PNEUPAN002494000
- symbol?: yidA_2
- synonym:
- description?: Cof-type HAD-IIB family hydrolase
- Cof-type HAD-IIB family hydrolase
- Cof family protein
- haloacid dehalogenase-like hydrolase
- haloacid dehalogenase
- Sugar phosphatase YidA
- Cof-like hydrolase
- Conserved hypothetical protein
- HMP-PP hydrolase (pyridoxal phosphatase) Cof,detected in genetic screen for thiamin metabolic genes (PMID:15292217)
- Hydrolase, HAD superfamily
- Predicted hydrolases of the HAD superfamily
- sugar phosphatase
descriptions from strain specific annotations:
- strand?: -
- coordinates?: 3192031..3192849
- occurrence?: in 100% of 43 strains
⊟Orthologs[edit | edit source]
⊟Genome Viewer[edit | edit source]
| TIGR4 | |
| D39 | |
| D39V | |
| Hungary19A-6 | |
| EF3030 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.505)
TIGR4 MADIKLIALDLDGTLLTTDKRLTDRTKETLQAARDRGIKVVLTTGRPLKAMDFFLHELGT
D39 MADIKLIALDLDGTLLTTDKRLTDRTKETLKAARDRGIKVVLTTGRPLKAMDFFLHELGT
D39V MADIKLIALDLDGTLLTTDKRLTDRTKETLKAARDRGIKVVLTTGRPLKAMDFFLHELGT
Hungary19A-6 MADIKLIALDLDGTLLTTDKRLTDRTKETLKAARDRGIKVVLTTGRPLKAMDFFLHELGT
EF3030 MADIKLIALDLDGTLLTTDKRLTDRTKETLKAARDRGIKVVLTTGRPLKAMDFFLHELGT
******************************:*****************************
TIGR4 DGQEDEYTITFNGGLVQKNTGEILDKTVFSYDDVARLYEETEKLSLPLDAISEGTVYQIQ
D39 DGQEDEYTITFNGGLVQKNTGEILDKTVFSYDDVARLYEETEKLSLPLDAISEGTVYQIQ
D39V DGQEDEYTITFNGGLVQKNTGEILDKTVFSYDDVARLYEETEKLSLPLDAISEGTVYQIQ
Hungary19A-6 DGHEDEYTITFNGGLVQKNTGEILDKTVFSYDDVARLYEETEKLSLPLDAISEGTVYQIQ
EF3030 DGQEDEYTITFNGGLVQKNTGEILDKTVFSYDDVARLYEETEKLSLPLDAISEGTVYQIQ
**:*********************************************************
TIGR4 SDQESLYAKFNPALTFVPVDFEDLSSQMTYNKCVTAFAQEPLDAAIQKISPELFDQYEIF
D39 SDQESLYAKFNPALTFVPVDFEDLSSQMTYNKCVTAFAQEPLDAAIQKISPELFDQYEIF
D39V SDQESLYAKFNPALTFVPVDFEDLSSQMTYNKCVTAFAQEPLDAAIQKISPELFDQYEIF
Hungary19A-6 SDQESLYAKFNPALTFVPVDFEDLSNQMTYNKCVTAFAQEPLDAAIQKISPELFDQYEIF
EF3030 SDQESLYAKFNPALTFVPVDFEDLSSQMTYNKCVTAFAQEPLDAAIQKISLELFDQYEIF
*************************.************************ *********
TIGR4 KSREMLLEWSPKNVHKATGLAKLISHLGIDQSQVMACGDEANDLSMIEWAGLGVAMQNAV
D39 KSREMLLEWSPKNVHKATGLAKLISHLGIDQSQVMACGDEANDLSMIEWAGLGVAMQNAV
D39V KSREMLLEWSPKNVHKATGLAKLISHLGIDQSQVMACGDEANDLSMIEWAGLGVAMQNAV
Hungary19A-6 KSREMLLEWSPKNVHKATGLAKLISHLGIDQSQVMACGDEANDLSMIEWAGLGVAMQNAV
EF3030 KSREMLLEWSPKNVHKATGLAKLISHLGIDQSQVMACGDEANDLSMIEWAGLGVAMQNAV
************************************************************
TIGR4 PEVKAAANVVTPMTNDEEAVAWAIEEYVLKEN
D39 PEVKAAANVVTPMTNDEEAVAWAIEEYVLKEN
D39V PEVKAAANVVTPMTNDEEAVAWAIEEYVLKEN
Hungary19A-6 PEVKAAANVVTPMTNDEEAVAWAIEEYVLKEN
EF3030 PEVKAAANVVTPMTNDEEAVAWAIEEYVLKEN
********************************