PangenomeTIGR4

serotype 4

D39

serotype 2

D39V

serotype 2

Hungary19A-6

serotype 19A

EF3030

serotype 19F

670-6B

serotype 6B

6A-10

serotype 6A

70585

serotype 5

A026

serotype 19F

A66

serotype 3

AP200

serotype 11A

ASP0581

serotype 12F

ATCC 49619

serotype 19F

ATCC 700669

serotype 23F

BM6001

serotype 19F

BVJ1JL

serotype 1

CGSP14

serotype 14

G54

serotype 19F

HU-OH

serotype 3

Hu15

serotype 19A

Hu17

serotype 19A

INV104

serotype 1

INV200

serotype 14

JJA

serotype 14

MDRSPN001

serotype 19F

NCTC7465

serotype 1

NCTC7466

serotype 2

NU83127

serotype 4

OXC141

serotype 3

P1031

serotype 1

R6

serotype 2

SP49

serotype 19A

SPN032672

serotype 1

SPN034156

serotype 3

SPN034183

serotype 3

SPN994038

serotype 3

SPN994039

serotype 3

SPNA45

serotype 3

ST556

serotype 19F

TCH8431/19A

serotype 19A

Taiwan19F-14

serotype 19F

Xen35

serotype 4

gamPNI0373

serotype 1

⊟Summary

• pan ID^?: PNEUPAN002502000
• symbol^?: rnc
• synonym:
• description^?: ribonuclease III

  descriptions from strain specific annotations:

  • ribonuclease III
  • ribonuclease 3
  • dsRNA-specific ribonuclease
• strand^?: -
• coordinates^?: 3206263..3206961
• occurrence^?: in 100% of 43 strains

⊟Orthologs

(4)^?
TIGR4:
SP_RS06115 (rnc)
(2)
D39:
SPD_RS05910 (rnc)
(2)
D39V:
SPV_RS05900 (rnc)
(19A)
Hungary19A-6:
SPH_RS06605 (rnc)
(19F)
EF3030:
EF3030_RS05210 (rnc)
(6B)^?
670-6B:
SP670_RS05080 (rnc)
(6A)
6A-10:
HKM25_RS05860 (rnc)
(5)
70585:
SP70585_RS06515 (rnc)
(19F)
A026:
T308_RS04585 (rnc)
(3)
A66:
A66_RS05675 (rnc)
(11A)
AP200:
SPAP_RS06290 (rnc)
(12F)
ASP0581:
EL334_RS06455 (rnc)
(19F)
ATCC 49619:
EL263_RS06095 (rnc)
(23F)
ATCC 700669:
SPN23F_RS05795 (rnc)
(19F)
BM6001:
ODS73_RS06525 (rnc)
(1)
BVJ1JL:
JN057_RS06220 (rnc)
(14)
CGSP14:
SPCG_RS05470 (rnc)
(19F)
G54:
SPG_RS05735 (rnc)
(1)
gamPNI0373:
HMPREF1038_RS06155 (rnc)
(3)
HU-OH:
EL271_RS06265 (rnc)
(19A)
Hu15:
SPNHU15_RS06065 (rnc)
(19A)
Hu17:
SPNHU17_RS05990 (rnc)
(1)
INV104:
INV104_RS06185 (rnc)
(14)
INV200:
SPNINV200_RS05305 (rnc)
(14)
JJA:
SPJ_RS05780 (rnc)
(19F)
MDRSPN001:
MDRSPN_RS04180 (rnc)
(1)
NCTC7465:
AT689_RS07690 (rnc)
(2)
NCTC7466:
DQM66_RS05910 (rnc)
(4)
NU83127:
EL277_RS06140 (rnc)
(3)
OXC141:
SPNOXC_RS06020 (rnc)
(1)
P1031:
SPP_RS06360 (rnc)
(2)
R6:
SPR_RS05625 (rnc)
(19A)
SP49:
BMJ42_RS06575 (rnc)
(1)
SPN032672:
SPN032672_RS01055 (rnc)
(3)
SPN034156:
SPN034156_RS01075 (rnc)
(3)
SPN034183:
SPN034183_RS06035 (rnc)
(3)
SPN994038:
SPN994038_RS05940 (rnc)
(3)
SPN994039:
SPN994039_RS05945 (rnc)
(3)
SPNA45:
SPNA45_RS05275 (rnc)
(19F)
ST556:
MYY_RS05060 (rnc)
(19F)
Taiwan19F-14:
SPT_RS04845 (rnc)
(19A)
TCH8431/19A:
HMPREF0837_RS06010 (rnc)
(4)
Xen35:
CXP32_RS06180 (rnc)

⊟Genome Viewer

TIGR4
D39
D39V
Hungary19A-6
EF3030

⊟Alignments

• alignment of orthologues:
  CLUSTAL format alignment by MAFFT L-INS-i (v7.505)
  
  
  TIGR4           MKELQTVLKNHFAIEFADKKLLETAFTHTSYANEHRLLKISHNERLEFLGDAVLQLLISE
  D39             MKELQTVLKNHFEIEFADKKLLETAFTHTSYANEHRLLKISHNERLEFLGDAVLQLLISE
  D39V            MKELQTVLKNHFEIEFADKKLLETAFTHTSYANEHRLLKISHNERLEFLGDAVLQLLISE
  Hungary19A-6    MKELQTVLKNHFAIEFADKNLLETAFTHTSYANEHRLLKISHNERLEFLGDAVLQLLISE
  EF3030          MKELQTVLKNHFAIEFADKNLLETAFTHTSYANEHRLLKISHNERLEFLGDAVLQLLISE
                  ************ ******:****************************************
  
  TIGR4           YLYKKYPKKPEGDLSKLRAMIVREESLAGFARDCQFDQFIKLGKGEEKSGGRNRDTILGD
  D39             YLYKKYPKKPEGDLSKLRAMIVREESLAGFARDCQFDQFIKLGKGEEKSGGRNRDTILGD
  D39V            YLYKKYPKKPEGDLSKLRAMIVREESLAGFARDCQFDQFIKLGKGEEKSGGRNRDTILGD
  Hungary19A-6    YLYKKYPKKPEGDLSKLRAMIVREESLAGFARDCQFDQFIKLGKGEEKSGGRNRDTILGD
  EF3030          YLYKKYPKKPEGDLSKLRAMIVREESLAGFARDCQFDQFIKLGKGEEKSGGRNRDTILGD
                  ************************************************************
  
  TIGR4           AFEAFLGALLLDKDVAKVKEFIYQVMIPKVEAGEFEMITDYKTHLQELLQVNGDVAIRYQ
  D39             AFEAFLGALLLDKDVAKVKEFIYQVMIPKVEAGEFEMITDYKTHLQELLQVNGDVAIRYQ
  D39V            AFEAFLGALLLDKDVAKVKEFIYQVMIPKVEAGEFEMITDYKTHLQELLQVNGDVAIRYQ
  Hungary19A-6    AFEAFLGALLLDKDVAKVKEFIYQVMIPKVEAGEFEMITDYKTHLQELLQVNGDVAIRYQ
  EF3030          AFEAFLGALLLDKDVAKVKEFIYQVMIPKVEAGEFEMITDYKTYLQELLQVNGDVAIRYQ
                  *******************************************:****************
  
  TIGR4           VISETGPAHDKVFDVEVLVEGKSIGQGQGRSKKLAEQEAAKNAVEKGLDSCI
  D39             VISETGPAHDKVFDVEVLVEGKSIGQGQGRSKKLAEQEAAKNAVEKGLDSCI
  D39V            VISETGPAHDKVFDVEVLVEGKSIGQGQGRSKKLAEQEAAKNAVEKGLDSCI
  Hungary19A-6    VISETGPAHDKVFDVEVLVEGKSIGQGQGRSKKLAEQEAAKNAVEKGLDSCI
  EF3030          VISETGPAHDKVFDVEVLVEGKSIGQGQGRSKKLAEQEAAKNAVEKGLDSCI
                  ****************************************************