PangenomeTIGR4

serotype 4

D39

serotype 2

D39V

serotype 2

Hungary19A-6

serotype 19A

EF3030

serotype 19F

670-6B

serotype 6B

6A-10

serotype 6A

70585

serotype 5

A026

serotype 19F

A66

serotype 3

AP200

serotype 11A

ASP0581

serotype 12F

ATCC 49619

serotype 19F

ATCC 700669

serotype 23F

BM6001

serotype 19F

BVJ1JL

serotype 1

CGSP14

serotype 14

G54

serotype 19F

HU-OH

serotype 3

Hu15

serotype 19A

Hu17

serotype 19A

INV104

serotype 1

INV200

serotype 14

JJA

serotype 14

MDRSPN001

serotype 19F

NCTC7465

serotype 1

NCTC7466

serotype 2

NU83127

serotype 4

OXC141

serotype 3

P1031

serotype 1

R6

serotype 2

SP49

serotype 19A

SPN032672

serotype 1

SPN034156

serotype 3

SPN034183

serotype 3

SPN994038

serotype 3

SPN994039

serotype 3

SPNA45

serotype 3

ST556

serotype 19F

TCH8431/19A

serotype 19A

Taiwan19F-14

serotype 19F

Xen35

serotype 4

gamPNI0373

serotype 1

⊟Summary

• pan ID^?: PNEUPAN002532000
• symbol^?: nth
• synonym:
• description^?: endonuclease III

  descriptions from strain specific annotations:

  • endonuclease III
  • putative endonuclease III
  • Ultraviolet N-glycosylase/AP lyase
  • endonuclease III (DNA repair), DNA-(apurinic or apyrimidinic site) lyase
  • endonuclease III (DNA repair)
  • endonuclease III (DNA repair)%2C DNA-(apurinic or apyrimidinic site) lyase
  • Predicted EndoIII-related endonuclease
• strand^?: -
• coordinates^?: 3242629..3243258
• occurrence^?: in 100% of 43 strains

⊟Orthologs

(4)^?
TIGR4:
SP_RS06270 (nth)
(2)
D39:
SPD_RS06055 (nth)
(2)
D39V:
SPV_RS06050 (nth)
(19A)
Hungary19A-6:
SPH_RS06750 (nth)
(19F)
EF3030:
EF3030_RS06145 (nth)
(6B)^?
670-6B:
SP670_RS04925 (nth)
(6A)
6A-10:
HKM25_RS06000 (nth)
(5)
70585:
SP70585_RS06665 (nth)
(19F)
A026:
T308_RS04435 (nth)
(3)
A66:
A66_RS05825 (nth)
(11A)
AP200:
SPAP_RS06450 (nth)
(12F)
ASP0581:
EL334_RS06595 (nth)
(19F)
ATCC 49619:
EL263_RS06235 (nth)
(23F)
ATCC 700669:
SPN23F_RS05945 (nth)
(19F)
BM6001:
ODS73_RS06670 (nth)
(1)
BVJ1JL:
JN057_RS06370 (nth)
(14)
CGSP14:
SPCG_RS06435 (nth)
(19F)
G54:
SPG_RS05885 (nth)
(1)
gamPNI0373:
HMPREF1038_RS06295 (nth)
(3)
HU-OH:
EL271_RS06405 (nth)
(19A)
Hu15:
SPNHU15_RS06215 (nth)
(19A)
Hu17:
SPNHU17_RS06145 (nth)
(1)
INV104:
INV104_RS06335 (nth)
(14)
INV200:
SPNINV200_RS06250 (nth)
(14)
JJA:
SPJ_RS05930 (nth)
(19F)
MDRSPN001:
MDRSPN_RS04035 (nth)
(1)
NCTC7465:
AT689_RS07540 (nth)
(2)
NCTC7466:
DQM66_RS06055 (nth)
(4)
NU83127:
EL277_RS06290 (nth)
(3)
OXC141:
SPNOXC_RS06170 (nth)
(1)
P1031:
SPP_RS06510 (nth)
(2)
R6:
SPR_RS05780 (nth)
(19A)
SP49:
BMJ42_RS06720 (nth)
(1)
SPN032672:
SPN032672_RS01205 (nth)
(3)
SPN034156:
SPN034156_RS01225 (nth)
(3)
SPN034183:
SPN034183_RS06185 (nth)
(3)
SPN994038:
SPN994038_RS06090 (nth)
(3)
SPN994039:
SPN994039_RS06095 (nth)
(3)
SPNA45:
SPNA45_RS05130 (nth)
(19F)
ST556:
MYY_RS04910 (nth)
(19F)
Taiwan19F-14:
SPT_RS04695 (nth)
(19A)
TCH8431/19A:
HMPREF0837_RS05860 (nth)
(4)
Xen35:
CXP32_RS06330 (nth)

⊟Genome Viewer

TIGR4
D39
D39V
Hungary19A-6
EF3030

⊟Alignments

• alignment of orthologues:
  CLUSTAL format alignment by MAFFT L-INS-i (v7.505)
  
  
  TIGR4           MVLSKKRARKVLEEIIALFPDAKPSLDFTNHFELLVAVMLSAQTTDAAVNKATPGLFVAF
  D39             MVLSKKRARKVLEEIIALFPDAKPSLDFTNHFELLVAVMLSAQTTDAAVNKATPGLFVAF
  D39V            MVLSKKRARKVLEEIIALFPDAKPSLDFTNHFELLVAVMLSAQTTDAAVNKATPGLFVAF
  Hungary19A-6    MVLSKKRARKVLEEIIALFPDAKPSLDFTNHFELLVAVMLSAQTTDAAVNKATPGLFVAF
  EF3030          MVLSKKRARKVLEEIIALFPDAKPSLDFTNHFELLVAVMLSAQTTDAAVNKATPGLFVAF
                  ************************************************************
  
  TIGR4           PTPQAMSVATESEIASHISRLGLYRNKAKFLKKCAQQLLDDFDGQVPQTREELESLAGVG
  D39             PTPQAMSVATESEIASHISRLGLYRNKAKFLKKCAQQLLDDFDGQVPQTREELESLAGVG
  D39V            PTPQAMSVATESEIASHISRLGLYRNKAKFLKKCAQQLLDDFDGQVPQTREELESLAGVG
  Hungary19A-6    PTPQAMSVATESEIASHISRLGLYRNKAKFLKKCAQQLLDDFDGQVPQTREELESLAGVG
  EF3030          PTPQAMSVATESEIASHISRLGLYRNKAKFLKKCAQQLLDDFDGQVPQTREELESLAGVG
                  ************************************************************
  
  TIGR4           RKTANVVMSVGFGIPAFAVDTHVERICKHHDIVKKSATPLEVEKRVMDILPPEQWLAAHQ
  D39             RKTANVVMSVGFGIPAFAVDTHVERICKHHDIVKKSATPLEVEKRVMDILPPEQWLAAHQ
  D39V            RKTANVVMSVGFGIPAFAVDTHVERICKHHDIVKKSATPLEVEKRVMDILPPEQWLAAHQ
  Hungary19A-6    RKTANVVMSVGFGIPAFAVDTHVERICKHHDIVKKSATPLEVEKRVMDILPPEQWLAAHQ
  EF3030          RKTANVVMSVGFGIPAFAVDTHVERICKHHDIVKKSATPLEVEKRVMDILPPEQWLAAHQ
                  ************************************************************
  
  TIGR4           AMIYFGRAICHPKNPECDQYPQLYDFSNL
  D39             AMIYFGRAICHPKNPECDQYPQLYDFSNL
  D39V            AMIYFGRAICHPKNPECDQYPQLYDFSNL
  Hungary19A-6    AMIYFGRAICHPKNPECDQYPQLYDFSNL
  EF3030          AMIYFGRAICHPKNPECDQYPQLYDFSNL
                  *****************************