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PangenomeTIGR4
serotype 4
D39serotype 2
D39Vserotype 2
Hungary19A-6serotype 19A
EF3030serotype 19F
670-6Bserotype 6B
6A-10serotype 6A
70585serotype 5
A026serotype 19F
A66serotype 3
AP200serotype 11A
ASP0581serotype 12F
ATCC 49619serotype 19F
ATCC 700669serotype 23F
BVJ1JLserotype 1
CGSP14serotype 14
G54serotype 19F
HU-OHserotype 3
Hu15serotype 19A
Hu17serotype 19A
INV104serotype 1
INV200serotype 14
JJAserotype 14
MDRSPN001serotype 19F
NCTC7466serotype 2
NU83127serotype 4
OXC141serotype 3
P1031serotype 1
R6serotype 2
SP49serotype 19A
SPN032672serotype 1
SPN034156serotype 3
SPN034183serotype 3
SPN994038serotype 3
SPN994039serotype 3
SPNA45serotype 3
ST556serotype 19F
TCH8431/19Aserotype 19A
Taiwan19F-14serotype 19F
Xen35serotype 4
gamPNI0373serotype 1
⊟Summary[edit | edit source]
- pan ID?: PNEUPAN002556000
- symbol?: tarJ
- synonym:
- description?: ribitol-5-phosphate dehydrogenase
- ribitol-5-phosphate dehydrogenase
- putative zinc-binding dehydrogenase
- xylitol dehydrogenase
- ribulose-5-phosphate reductase
- alcohol dehydrogenase, zinc-containing
- zinc-containing alcohol dehydrogenase
- alcohol dehydrogenase, zinc-dependent
- alcohol dehydrogenase GroES-like domain protein
- Conserved hypothetical protein
- GroES-like protein
- Threonine dehydrogenase-like Zn-dependent dehydrogenase
- zinc-dependent alcohol dehydrogenase
descriptions from strain specific annotations:
- strand?: -
- coordinates?: 3173881..3174903
- occurrence?: in 100% of 41 strains
⊟Orthologs[edit | edit source]
⊟Genome Viewer[edit | edit source]
| TIGR4 | |
| D39 | |
| D39V | |
| Hungary19A-6 | |
| EF3030 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.505)
TIGR4 MINQIYQLTKPKFINVKYQEEAIDQENHILIRPNYMAVCHADQRYYQGKRDPKILNKKLP
D39 MINQIYQLTKPKFINVKYQEEAIDQENHILIRPNYMAVCHADQRYYQGKRDPKILNKKLP
D39V MINQIYQLTKPKFINVKYQEEAIDQENHILIRPNYMAVCHADQRYYQGKRDPKILNKKLP
Hungary19A-6 MINQIYQLTKPKFINVKYQEEAIDQENHILIRPNYMAVCHADQRYYQGKRDPKILNKKLP
EF3030 MINQIYQLTKPKFINVKYQEEAIDQENHILIRPNYMAVCHADQRYYQGKRDPKILNKKLP
************************************************************
TIGR4 MAMIHESCGTVISDPTGTYEVGQKVVMIPNQSPMQSDEEFYENYMTGTHFLSSGFDGFMR
D39 MAMIHESCGTVISDPTGTYEVGQKVVMIPNQSPMQSDEEFYENYMTGTHFLSSGFDGFMR
D39V MAMIHESCGTVISDPTGTYEVGQKVVMIPNQSPMQSDEEFYENYMTGTHFLSSGFDGFMR
Hungary19A-6 MAMIHESCGTVISDPTGTYEVGQKVVMIPNQSPMQSDEEFYENYMTGTHFLSSGFDGFMR
EF3030 MAMIHESCGTVISDPTGTYEVGQKVVMIPNQSPMQSDEEFYENYMTGTHFLSSGFDGFMR
************************************************************
TIGR4 EFVSLPKDRVVAYDAIEDTVAAITEFVSVGMHAMNRLLTLAHSKRERIAVIGDGSLAFVV
D39 EFVSLPKDRVVAYDAIEDTVAAITEFVSVGMHAMNRLLTLAHSKRERIAVIGDGSLAFVV
D39V EFVSLPKDRVVAYDAIEDTVAAITEFVSVGMHAMNRLLTLAHSKRERIAVIGDGSLAFVV
Hungary19A-6 EFVSLPKDRVVAYDAIEDTVAAITEFVSVGMHAMNRLLTLAHSKRERIAVIGDGSLAFVV
EF3030 EFVSLPKDRVVAYDAIEDTVAAITEFVSVGMHAMNRLLTLAHSKRERIAVIGDGSLAFVV
************************************************************
TIGR4 ANIINYTLPEAEIVVIGRHWEKLELFSFAKECYITDNIPEDLAFDHAFECCGGDGTGPAI
D39 ANIINYTLPEAEIVVIGRHWEKLELFSFAKECYITDNIPEDLAFDHAFECCGGDGTGPAI
D39V ANIINYTLPEAEIVVIGRHWEKLELFSFAKECYITDNIPEDLAFDHAFECCGGDGTGPAI
Hungary19A-6 ANIINYTLPESEIVVIGRHWEKLELFSFAKECYITDNIPEELAFDHAFECCGGDGTGPAI
EF3030 ANIINYTLPEAEIVVIGRHWEKLELFSFAKECYITDNIPEDLAFDHAFECCGGDGTGPAI
**********:*****************************:*******************
TIGR4 NDLIRYIRPQGTILMMGVSEYKVNLNTRDALEKGLILVGSSRSGRIDFENAIQMMEVKKF
D39 NDLIRYIRPQGTILMMGVSEYKVNLNTRDALEKGLILVGSSRSGRIDFENAIQMMEVKKF
D39V NDLIRYIRPQGTILMMGVSEYKVNLNTRDALEKGLILVGSSRSGRIDFENAIQMMEVKKF
Hungary19A-6 NDLIRYIRPQGTILMMGVSEYKVNLNTRDALEKGLILVGSSRSGRIDFKNAIQMMEVKKF
EF3030 NDLIRYIRPQGTILMMGVSEYKVNLNTRDALEKGLLLVGSSRSGRIDFENAIQMMEVKKF
***********************************:************:***********
TIGR4 ANRLKNILYLEEPVREIKDIHRVFATDLNTAFKTVFKWEV
D39 ANRLKNILYLEEPVREIKDIHRVFATDLNTAFKTVFKWEV
D39V ANRLKNILYLEEPVREIKDIHRVFATDLNTAFKTVFKWEV
Hungary19A-6 ANRLKNILYLEEPVREIKDIHRVFATDLNTAFKTVFKWEV
EF3030 ANRLKNILYLEEPVREIKDIHRVFATDLNTAFKTVFKWEV
****************************************