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PangenomeTIGR4
serotype 4
D39serotype 2
D39Vserotype 2
Hungary19A-6serotype 19A
EF3030serotype 19F
670-6Bserotype 6B
6A-10serotype 6A
70585serotype 5
A026serotype 19F
A66serotype 3
AP200serotype 11A
ASP0581serotype 12F
ATCC 49619serotype 19F
ATCC 700669serotype 23F
BVJ1JLserotype 1
CGSP14serotype 14
G54serotype 19F
HU-OHserotype 3
Hu15serotype 19A
Hu17serotype 19A
INV104serotype 1
INV200serotype 14
JJAserotype 14
MDRSPN001serotype 19F
NCTC7466serotype 2
NU83127serotype 4
OXC141serotype 3
P1031serotype 1
R6serotype 2
SP49serotype 19A
SPN032672serotype 1
SPN034156serotype 3
SPN034183serotype 3
SPN994038serotype 3
SPN994039serotype 3
SPNA45serotype 3
ST556serotype 19F
TCH8431/19Aserotype 19A
Taiwan19F-14serotype 19F
Xen35serotype 4
gamPNI0373serotype 1
⊟Summary[edit | edit source]
- pan ID?: PNEUPAN002574000
- symbol?: levE_2
- synonym:
- description?: PTS sugar transporter subunit IIB
- PTS sugar transporter subunit IIB
- PTS system, IIB component
- putative PTS system, mannose-specific IIAB component
- PTS IIB component
- PTS system fructose-specific EIIB component
- Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB
- Phosphotransferase system sugar-specific EII component
- Predicted L-fucose-specific phosphotransferase system, EIIB component
- PTS family mannose/fructose/sorbose porter component IIB
- PTS mannose/fructose/sorbose transporter subunit IIB
- PTS sugar transporter
- PTS system sorbose subfamily IIB component
- PTS system sorbose subIIB component family protein
- PTS system transporter subunit IIB
- pseudogene
descriptions from strain specific annotations:
- strand?: +
- coordinates?: 3198387..4924129
- occurrence?: in 66% of 41 strains
⊟Orthologs[edit | edit source]
BVJ1JL:
—
CGSP14:
—
G54:
—
⊟Genome Viewer[edit | edit source]
| TIGR4 | |
| D39 | |
| D39V | |
| Hungary19A-6 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.505)
TIGR4 MSIEFVRIDDRLVHGQVVTTWLKKYDIEQVIIVNDRISEDKTRQSILKISAPVGLKIVFF
D39 MSIEFVRIDDRLVHGQVVTTWLKKYDIEQVIIVNDRISEDKIRQSILKISAPVGLKIVFF
D39V MSIEFVRIDDRLVHGQVVTTWLKKYDIEQVIIVNDRISEDKIRQSILKISAPVGLKIVFF
Hungary19A-6 MSIEFVRIDDRLVHGQVVTTWLKKYDIEQVIIVNDRISEDKTRQSILKISAPVGLKIVFF
***************************************** ******************
TIGR4 SVKRFVEVLNSVPIKKRTMLIYTNPKDVYDSIEGNLKLEYLNVGQMSKTEENEKVTGGVA
D39 SVKRFVEVLNSVPIKKRTMLIYTNPKDVYDSIEGNLKLEYLNVGQMSKTEENEKVTGGVA
D39V SVKRFVEVLNSVPIKKRTMLIYTNPKDVYDSIEGNLKLEYLNVGQMSKTEENEKVTGGVA
Hungary19A-6 SVKRFVEVLNSVPIKKRTMLIYTNPKDVYDSIEGNLKLEYLNVGQMSKTEENEKVTGGVA
************************************************************
TIGR4 LGEEDKYYFKKIVDKGTRVEIQMVPNDKVTMLEKF---L
D39 LGEEDKYYFKKIVDKGTRVEIQMVPNDKVTMLEKF---L
D39V LGEEDKYYFKKIVDKGTRVEIQMVPNDKVTMLEKF---L
Hungary19A-6 LGEEDKYYFKKIVDKGTRVEIQMVPNDKVTMLENFYKII
*********************************:* :