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PangenomeTIGR4
serotype 4
D39serotype 2
D39Vserotype 2
Hungary19A-6serotype 19A
EF3030serotype 19F
670-6Bserotype 6B
6A-10serotype 6A
70585serotype 5
A026serotype 19F
A66serotype 3
AP200serotype 11A
ASP0581serotype 12F
ATCC 49619serotype 19F
ATCC 700669serotype 23F
BM6001serotype 19F
BVJ1JLserotype 1
CGSP14serotype 14
G54serotype 19F
HU-OHserotype 3
Hu15serotype 19A
Hu17serotype 19A
INV104serotype 1
INV200serotype 14
JJAserotype 14
MDRSPN001serotype 19F
NCTC7465serotype 1
NCTC7466serotype 2
NU83127serotype 4
OXC141serotype 3
P1031serotype 1
R6serotype 2
SP49serotype 19A
SPN032672serotype 1
SPN034156serotype 3
SPN034183serotype 3
SPN994038serotype 3
SPN994039serotype 3
SPNA45serotype 3
ST556serotype 19F
TCH8431/19Aserotype 19A
Taiwan19F-14serotype 19F
Xen35serotype 4
gamPNI0373serotype 1
⊟Summary[edit | edit source]
- pan ID?: PNEUPAN002593000
- symbol?: pde2
- synonym:
- description?: DHH family phosphoesterase
- DHH family phosphoesterase
- DHH subfamily 1 protein
- Conserved hypothetical protein
- bifunctional oligoribonuclease/PAP phosphatase NrnA
- putative bifunctional oligoribonuclease and PAP
- DHH family protein
- 3'-to-5' oligoribonuclease A, Bacillus type
- DHH family phosphoesterase Pde2
- phosphoesterase
- putative bifunctional oligoribonuclease and PAP phosphatase NrnA
descriptions from strain specific annotations:
- strand?: +
- coordinates?: 3328069..3329004
- occurrence?: in 100% of 43 strains
⊟Orthologs[edit | edit source]
⊟Genome Viewer[edit | edit source]
| TIGR4 | |
| D39 | |
| D39V | |
| Hungary19A-6 | |
| EF3030 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.505)
TIGR4 MEICQQILEKIKEYDTIIIHRHMKPDPDALGSQVGLKALLEHHFPEKTIKAVGFDEPTLT
D39 MEICQQILEKIKEYDTIIIHRHMKPDPDALGSQVGLKALLEHHFPEKTIKAVGFDEPTLT
D39V MEICQQILEKIKEYDTIIIHRHMKPDPDALGSQVGLKALLEHHFPEKTIKAVGFDEPTLT
Hungary19A-6 MEICQQILEKIKEYDTIIIHRHMKPDPDALGSQVGLKALLEHHFPEKTIKAVGFDEPTLT
EF3030 MEICQQILEKIKEYDTIIIHRHMKPDPDALGSQVGLKALLEHHFPEKTIKAVGFDEPTLT
************************************************************
TIGR4 WMAEMDLVEDRAYQGALVIVCDTANTARIDDKRYSQGDFLIKIDHHPNDDVYGDLSWVDT
D39 WMAEMDLVEDRAYQGALVIVCDTANTARIDDKRYSQGDFLIKIDHHPNDDVYGDLSWVDT
D39V WMAEMDLVEDRAYQGALVIVCDTANTARIDDKRYSQGDFLIKIDHHPNDDVYGDLSWVDT
Hungary19A-6 WMAEMDLVEDRAYQGALVIVCDTANTARIDDKRYSQGDFLIKIDHHPNDDVYGDLSWVDT
EF3030 WMAEMDLVEDRAYQGALVIVCDTANTARIDDKRYSQGDFLIKIDHHPNDDVYGDLSWVDT
************************************************************
TIGR4 SSSSASEMITLFAQTTQLALADRDAELLFAGIVGDTGRFLYPSTTARTLRLAAYLREHNF
D39 SSSSASEMITLFAQTTQLALADRDAELLFAGIVGDTGRFLYPSTTARTLRLAAYLREHNF
D39V SSSSASEMITLFAQTTQLALADRDAELLFAGIVGDTGRFLYPSTTARTLRLAAYLREHNF
Hungary19A-6 SSSSASEMITLFAQTTQLALADRDAELLFAGIVGDTGRFLYPSTTARTLRLAAYLREHNF
EF3030 SSSSASEMITLFAQTTQLALADRDAELLFAGIVGDTGRFLYPSTTARTLRLAAYLREHNF
************************************************************
TIGR4 DFAALTRKMDTMSYKIAKLQGYIYDHLEVDENGAARVILSQKILKQYNITDAETAAIVGA
D39 DFAALTRKMDTMSYKIAKLQGYIYDHLEVDENGAARVILSQEVLKQYNVTDAETAAIVGA
D39V DFAALTRKMDTMSYKIAKLQGYIYDHLEVDENGAARVILSQEVLKQYNVTDAETAAIVGA
Hungary19A-6 DFAALTRKMDTMSYKIAKLQGYIYDHLEVDENGAARVILSQEVLKQYNVTDAETAAIVGA
EF3030 DFAALTRKMDTMSYKIAKLQGYIYDHLEVDENGAARVILSQEVLKQYNVTDAETAAIVGA
*****************************************::*****:***********
TIGR4 PGRIDRVSLWGIFVEQADGHYRVRLRSKVHPINEIAKEHDGGGHPLASGANSYSLEENEI
D39 PGRIDRVSLWGIFVEQADGHYRVRLRSKIHPINEIAKEHDGGGHPLASGANSYSLEENEI
D39V PGRIDRVSLWGIFVEQADGHYRVRLRSKIHPINEIAKEHDGGGHPLASGANSYSLEENEI
Hungary19A-6 PGRIDRVSLWGIFVEQADGHYRVRLRSKVHPINEIAKEHDGGGHPLASGANSYSLEENEI
EF3030 PGRIDRVSLWGIFVEQADGHYRVRLRSKIHPINEIAKEHDGGGHPLASGANSYSLEENEI
****************************:*******************************
TIGR4 IYQKLKNLLKN
D39 IYQKLKNLLKN
D39V IYQKLKNLLKN
Hungary19A-6 IYQKLKNLLKN
EF3030 IYQKLKNLLKN
***********