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PangenomeTIGR4
serotype 4
D39serotype 2
D39Vserotype 2
Hungary19A-6serotype 19A
EF3030serotype 19F
670-6Bserotype 6B
6A-10serotype 6A
70585serotype 5
A026serotype 19F
A66serotype 3
AP200serotype 11A
ASP0581serotype 12F
ATCC 49619serotype 19F
ATCC 700669serotype 23F
BM6001serotype 19F
BVJ1JLserotype 1
CGSP14serotype 14
G54serotype 19F
HU-OHserotype 3
Hu15serotype 19A
Hu17serotype 19A
INV104serotype 1
INV200serotype 14
JJAserotype 14
MDRSPN001serotype 19F
NCTC7465serotype 1
NCTC7466serotype 2
NU83127serotype 4
OXC141serotype 3
P1031serotype 1
R6serotype 2
SP49serotype 19A
SPN032672serotype 1
SPN034156serotype 3
SPN034183serotype 3
SPN994038serotype 3
SPN994039serotype 3
SPNA45serotype 3
ST556serotype 19F
TCH8431/19Aserotype 19A
Taiwan19F-14serotype 19F
Xen35serotype 4
gamPNI0373serotype 1
⊟Summary[edit | edit source]
- pan ID?: PNEUPAN002647000
- symbol?: aroA
- synonym:
- description?: 3-phosphoshikimate 1-carboxyvinyltransferase
- 3-phosphoshikimate 1-carboxyvinyltransferase
- 5-enolpyruvylshikimate-3-phosphate synthase
- 3-Enolpyruvylshikimate-5-phosphate synthetase
descriptions from strain specific annotations:
- strand?: -
- coordinates?: 3502851..3504134
- occurrence?: in 100% of 43 strains
⊟Orthologs[edit | edit source]
(12F)
ASP0581:
EL334_RS07010 (aroA)
(19F)
ATCC 49619:
EL263_RS06670 (aroA)
(23F)
ATCC 700669:
SPN23F_RS06760 (aroA)
(14)
INV200:
SPNINV200_RS06495 (aroA)
(14)
JJA:
SPJ_RS06315 (aroA)
(19F)
MDRSPN001:
MDRSPN_RS03805 (aroA)
(19A)
SP49:
BMJ42_RS07125 (aroA)
(1)
SPN032672:
SPN032672_RS01580 (aroA)
(3)
SPN034156:
SPN034156_RS01540 (aroA)
(3)
SPN034183:
SPN034183_RS06500 (aroA)
(3)
SPN994038:
SPN994038_RS06405 (aroA)
(3)
SPN994039:
SPN994039_RS06410 (aroA)
⊟Genome Viewer[edit | edit source]
| TIGR4 | |
| D39 | |
| D39V | |
| Hungary19A-6 | |
| EF3030 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.505)
TIGR4 MKLKTNIRHLHGSIRVPGDKSISHRSIIFGSLAEGETKVYDILRGEDVLSTMQVFRDLGV
D39 MKLKTNIRHLHGSIRVPGDKSISHRSIIFGSLAEGETKVYDILRGEDVLSTMQVFRDLGV
D39V MKLKTNIRHLHGSIRVPGDKSISHRSIIFGSLAEGETKVYDILRGEDVLSTMQVFRDLGV
Hungary19A-6 MKLKTNIRHLHGSIRVPGDKSISHRSIIFGSLAEGETKVYDILRGEDVLSTMQVFRDLGV
EF3030 MKLKTNIRHLHGSIRVPGDKSISHRSIIFGSLAEGETKVYDILRGEDVLSTMQVFRDLGV
************************************************************
TIGR4 EIEDKDGVITIQGVGMAGLKAPQNALNMGNSGTSIRLISGVLAGADFEVEMFGDDSLSKR
D39 EIEDKDGVITIQGVGMAGLKAPQNALNMGNSGTSIRLISGVLAGADFEVEMFGDDSLSKR
D39V EIEDKDGVITIQGVGMAGLKAPQNALNMGNSGTSIRLISGVLAGADFEVEMFGDDSLSKR
Hungary19A-6 EIEDKDGVITIQGVGMAGLKAPQNALNMGNSGTSIRLISGVLAGADFEVEMFGDDSLSKR
EF3030 EIEDKDGVITIQGVGMAGLKAPQNALNMGNSGTSIRLISGVLAGADFEVEMFGDDSLSKR
************************************************************
TIGR4 PMDRVTLPLKKMGVSISGQTERDLPPLRLKGTKNLRPIHYELPIASAQVKSALMFAALQA
D39 PMDRVTLPLKKMGVSISGQTERDLPPLRLKGTKNLRPIHYELPIASAQVKSALMFAALQA
D39V PMDRVTLPLKKMGVSISGQTERDLPPLRLKGTKNLRPIHYELPIASAQVKSALMFAALQA
Hungary19A-6 PMDRVTLPLKKMGVSISGQTERDLPPLRLKGTKNLRPIHYELPIASAQVKSALMFAALQA
EF3030 PMDRVTLPLKKMGVSISGQTERDLLPLRLKGTKNLRPIHYELPIASAQVKSALMFAALQA
************************ ***********************************
TIGR4 KGESVIIEKEYTRNHTEDMLKQFGGHLSVDGKKITVQGPQKLTGQKVVVPGDISSAAFWL
D39 KGESVIIEKECTRNHTEDMLKQFGGHLSVDGKKITVQGPQKLTGQKVVVPGDISSAAFWL
D39V KGESVIIEKECTRNHTEDMLKQFGGHLSVDGKKITVQGPQKLTGQKVVVPGDISSAAFWL
Hungary19A-6 KGASVIIEKECTRNHTEDMLKQFGGHLSVDSKKITVQGPQKLTGQKVVVPGDISSAAFWL
EF3030 KGESVIIEKEYTRNHTEDMLQQFGGHLSVDGKKITVQGPQKLTGQKVVVPGDISSAAFWL
** ******* *********:*********.*****************************
TIGR4 VAGLIAPNSRLVLQNVGINETRTGIIDVIRAMGGKLEITEIDPVAKSATLIVESSDLKGT
D39 VAGLINPNSHLVLQNVGINETRTGIIDVIRAMGGKLEVTEIDPVAKSSTLTVESSDLKGT
D39V VAGLINPNSHLVLQNVGINETRTGIIDVIRAMGGKLEVTEIDPVAKSSTLTVESSDLKGT
Hungary19A-6 VAGLIVPNSRLVLQNVGINETRTGIIDVIRAMGGKLEITEIDPVAKSSTLTVESSDLKGT
EF3030 VAGLIAPNSRLVLQNVGINETRTGIIDVIRAMGGKLKITEIDPVAKSATLIVESSDLKGT
***** ***:**************************::*********:** *********
TIGR4 EIGGALIPRLIDELPIIALLATQAQGVTVIKDAEELKVKETDRIQVVADALNSMGADITP
D39 EIGGALIPRLIDELPIIALLATQAQGVTVIKDAEELKVKETDRIQVVADALNSMGADITP
D39V EIGGALIPRLIDELPIIALLATQAQGVTVIKDAEELKVKETDRIQVVADALNSMGADITP
Hungary19A-6 EIGGALIPRLIDELPIIALLATQAQGVTVIKDAEELKVKETDRIQVVADALNSMGADITP
EF3030 EICGALIPRLIDELPIIALLATQAQGVTVIKDAEELKVKETDRIQVVADALNSMGADITP
** *********************************************************
TIGR4 TADGMIIKGKSALHGARVNTFGDHRIGMMTAIAALLVADGEVELDRAEAINTSYPSFFDD
D39 TADGMIIKGKSALHGARVNTFGDHRIGMMTAIAALLVADGEVELDRAEAINTSYPSFFDD
D39V TADGMIIKGKSALHGARVNTFGDHRIGMMTAIAALLVADGEVELDRAEAINTSYPSFFDD
Hungary19A-6 TADGMIIKGKSALHGARVNTFGDHRIGMMTAIAALLVADGEVELDRAEAINTSYPSFFDD
EF3030 TADGMIIKGKSALHGARVNTFGDHRIGMMTAIAALLVADGEVELDRAEAINTSYPSFFDD
************************************************************
TIGR4 LESLIHG
D39 LESLIHG
D39V LESLIHG
Hungary19A-6 LESLIHG
EF3030 LESLIHG
*******