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PangenomeTIGR4
serotype 4
D39serotype 2
D39Vserotype 2
Hungary19A-6serotype 19A
EF3030serotype 19F
670-6Bserotype 6B
6A-10serotype 6A
70585serotype 5
A026serotype 19F
A66serotype 3
AP200serotype 11A
ASP0581serotype 12F
ATCC 49619serotype 19F
ATCC 700669serotype 23F
BVJ1JLserotype 1
CGSP14serotype 14
G54serotype 19F
HU-OHserotype 3
Hu15serotype 19A
Hu17serotype 19A
INV104serotype 1
INV200serotype 14
JJAserotype 14
MDRSPN001serotype 19F
NCTC7466serotype 2
NU83127serotype 4
OXC141serotype 3
P1031serotype 1
R6serotype 2
SP49serotype 19A
SPN032672serotype 1
SPN034156serotype 3
SPN034183serotype 3
SPN994038serotype 3
SPN994039serotype 3
SPNA45serotype 3
ST556serotype 19F
TCH8431/19Aserotype 19A
Taiwan19F-14serotype 19F
Xen35serotype 4
gamPNI0373serotype 1
⊟Summary[edit | edit source]
- pan ID?: PNEUPAN002665000
- symbol?: rpiR
- synonym:
- description?: MurR/RpiR family transcriptional regulator
- MurR/RpiR family transcriptional regulator
- transcriptional regulator, RpiR family
- transcriptional regulator
- HTH-type transcriptional regulator RpiR
- phosphosugar-binding transcriptional regulator, putative
- putative phosphosugar-binding transcriptional regulator
descriptions from strain specific annotations:
- strand?: +
- coordinates?: 3371230..569833
- occurrence?: in 41% of 41 strains
⊟Orthologs[edit | edit source]
SPN034156:
—
SPN034183:
—
SPN994038:
—
SPN994039:
—
SPNA45:
—
ST556:
—
⊟Genome Viewer[edit | edit source]
| TIGR4 | |
| Hungary19A-6 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.505)
TIGR4 MLLQKELIPMIEANLPNMAYAEKDIAKFFLKQQPLNDYSSKALCEYLNVSKATLTRFAKK
Hungary19A-6 MLLQKELIPMIEANLPNMAYAEKDIAKFFLKQQPLNNYSCEALCECLNVSKATLTRFAKK
************************************:**.:**** **************
TIGR4 CGFKGFRQFIFKYQEMIHEKEKLALYTEATEKVLSDYEEMLRKTYTVLDEVQLERIAEMI
Hungary19A-6 CGFKGFRQFIFKYQEMIREKEKLALYTEATEKVLSDYEEMLRKTYTVLDEVQLERIAEMI
*****************:******************************************
TIGR4 ETAERVYLYGKGSSVLALQEMKMRFMRLGVIGEVLSDEDMILWSSLLLNENCLVIGASIS
Hungary19A-6 ETAERVYLYGKGSSVLALQEMKMRFMRLGVIGEVLSDEDMILWSSLLLNENCLVIGASIS
************************************************************
TIGR4 GQTDIVLEGLQKAADKGAKTVLMTTRKFDEEDCFFDELLLLASTDHLSYGNRISPQFPIL
Hungary19A-6 GQTDIVLEGLQKAADKGAKTVLMTTRKFDEEDCFFDELLLLASTDHLSYGNRISPQFPIL
************************************************************
TIGR4 LITDCLFSNYLESPERQYYYNQTIIHKEE
Hungary19A-6 LITDCLFSNYLESPERQYYYNQTIIHKEE
*****************************