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PangenomeTIGR4
serotype 4
D39serotype 2
D39Vserotype 2
Hungary19A-6serotype 19A
EF3030serotype 19F
670-6Bserotype 6B
6A-10serotype 6A
70585serotype 5
A026serotype 19F
A66serotype 3
AP200serotype 11A
ASP0581serotype 12F
ATCC 49619serotype 19F
ATCC 700669serotype 23F
BVJ1JLserotype 1
CGSP14serotype 14
G54serotype 19F
HU-OHserotype 3
Hu15serotype 19A
Hu17serotype 19A
INV104serotype 1
INV200serotype 14
JJAserotype 14
MDRSPN001serotype 19F
NCTC7466serotype 2
NU83127serotype 4
OXC141serotype 3
P1031serotype 1
R6serotype 2
SP49serotype 19A
SPN032672serotype 1
SPN034156serotype 3
SPN034183serotype 3
SPN994038serotype 3
SPN994039serotype 3
SPNA45serotype 3
ST556serotype 19F
TCH8431/19Aserotype 19A
Taiwan19F-14serotype 19F
Xen35serotype 4
gamPNI0373serotype 1
⊟Summary[edit | edit source]
- pan ID?: PNEUPAN002682000
- symbol?: ABC-N/P_2
- synonym:
- description?: ABC transporter ATP-binding protein/permease
- ABC transporter ATP-binding protein/permease
- ABC transporter, ATP-binding/permease protein
- ABC transporter ATP-binding membrane protein
- multidrug ABC transporter ATP-binding protein
- putative ABC transporter ATP-binding protein
- ABC transporter, ATP-binding protein
- ABC transporter ATP-binding/permease protein
- ABC transporter ATP-binding protein
- Lipid A export ATP-binding/permease protein MsbA
- ABC transporter ATP-binding/membrane-spanning protein - unknown substrate
- ABC transporter family protein
- ABC-type multidrug transport system, ATPase and permease component
descriptions from strain specific annotations:
- strand?: -
- coordinates?: 3461025..3462749
- occurrence?: in 100% of 41 strains
⊟Orthologs[edit | edit source]
⊟Genome Viewer[edit | edit source]
| TIGR4 | |
| D39 | |
| D39V | |
| Hungary19A-6 | |
| EF3030 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.505)
TIGR4 MKHLLSYFKPYIKESILAPLFKLLEAVFELLVPMVIAGIVDQSLPQGDQGHLWMQIGLLL
D39 MKHLLSYFKPYIKESILAPLFKLLEAVFELLVPMVIAGIVDQSLPQGDQGHLWMQIGLLL
D39V MKHLLSYFKPYIKESILAPLFKLLEAVFELLVPMVIAGIVDQSLPQGDQGHLWMQIGLLL
Hungary19A-6 MKHLLSYFKPYIKESILAPLFKLLEAVFELLVPMVIAGIVDQSLPQGDQGHLWMQIGLLL
EF3030 MKHLLSYFKPYIKESILAPLFKLLEAVFELLVPMVIAGIVDQSLPQGDQGHLWMQIGLLL
************************************************************
TIGR4 IFAVIGVLVALIAQFYSAKAAVGSAKELTNDLYRHILSLPKDSRDRLTTSSLVTRLTSDT
D39 IFAVIGVLVALIAQFYSAKAAVGSAKELTNDLYRHILSLPKDSRDRLTTSSLVTRLTSDT
D39V IFAVIGVLVALIAQFYSAKAAVGSAKELTNDLYRHILSLPKDSRDRLTTSSLVTRLTSDT
Hungary19A-6 IFAVIGVLVALIAQFYSAKAAVGFAKELTNDLYRHILSLPKDSRDRLTTSSLVTRLTSDT
EF3030 IFAVIGVLVALIAQFYSAKAAVGFAKELTNDLYRHILSLPKDSRDRLTTSSLVTRLTSDT
*********************** ************************************
TIGR4 YQIQTGINQFLRLFLRAPIIVFGAIFMAYRISAELTFWFLVLVAILTIVIVGLSRLVNPF
D39 DQIQTGINQFLRLFLRAPIIVFGAIFMAYRISAELTFWFLVLVAILTIVIVGLSRLVNPF
D39V DQIQTGINQFLRLFLRAPIIVFGAIFMAYRISAELTFWFLVLVAILTIVIVGLSRLVNPF
Hungary19A-6 YQIQTGINQFLRLFLRAPIIVFGAIFMAYRISTELTFWFLVMVAILTIVIVGLSRLVNPL
EF3030 YQIQTGINQFLRLFLRAPIIVFGAIFMAYRISAELTFWFLVMVAILTIVIVGLSRLVNPL
*******************************:********:*****************:
TIGR4 YSSLRKKTDQLVQETRQQLQGMRVIRAFGQEKRELQIFQTLNQVYARLQEKTGFWSSLLT
D39 YSSLRKKTDQLVQETRQQLQGMRVIRAFGQEKRELQIFQTLNQVYARLQEKTGFWSSLLT
D39V YSSLRKKTDQLVQETRQQLQGMRVIRAFGQEKRELQIFQTLNQVYARLQEKTGFWSSLLT
Hungary19A-6 YSSLRKKTDQLVQETRQQLQGMRVIRAFGQEKRELQIFQTLNQVYARLQEKTGFWSSLLT
EF3030 YSSLRKKTDQLVQETRQQLQGMRVIRAFGQEKRELQIFQTLNQVYARLQEKTGFLSSLLT
****************************************************** *****
TIGR4 PLTYLIVNGTLLVIIWQGYISIQGGVLSQGALIALINYLLQILVELVKLAMLINSLNQSY
D39 PLTYLIVNGTLLVIIWQGYISIQGGVLSQGALIALINYLLQILVELVKLAMLINSLNQSY
D39V PLTYLIVNGTLLVIIWQGYISIQGGVLSQGALIALINYLLQILVELVKLAMLINSLNQSY
Hungary19A-6 PLTYLIVNGTLLVIIWQGYISIQGGVLSQGALIALINYLLQILVELVKLAMLINSLNQSY
EF3030 PLTYLIVNGTLLVIIWQGYISIQGGVLSQGALIALINYLLQILVELVKLAMLINSLNQSY
************************************************************
TIGR4 ISVKRIEEVFVEAPEDIHSELEQKQATRDKVLQVQELTFTYPDAAQPSLRYISFDMTQGQ
D39 ISVKRIEEVFVEAPEDIHSELEQKQATRDKVLQVQELTFTYPDAAQPSLRYISFDMTQGQ
D39V ISVKRIEEVFVEAPEDIHSELEQKQATRDKVLQVQELTFTYPDAAQPSLRYISFDMTQGQ
Hungary19A-6 ISAKRIEEVFVEAPEDIHSELEQKQATRDKVLQVQELTFTYPDAAQPSLRYISFDMTQGQ
EF3030 ISAKRIEEVFAESPENIHSELEQKQVTSGRVLQVQELTFTYPDAAQPSLRDISFDMTQGQ
**.*******.*:**:*********.* .:******************** *********
TIGR4 ILGIIGGTGSGKSSLVQLLLGLYPVDKGNIDLYQNGRSPLNLEQWRSWIAYVPQKVELFK
D39 ILGIIGGTGSGKSSLVQLLLGLYPVDKGNIDLYQNGRSPLNLEQWRSWIAYVPQKVELFK
D39V ILGIIGGTGSGKSSLVQLLLGLYPVDKGNIDLYQNGRSPLNLEQWRSWIAYVPQKVELFK
Hungary19A-6 ILGIIGGTGSGKSSLVQLLLGLYPVDKGNIDLYQNGRSPLNLEQWRSWIAYVPQKVELFK
EF3030 ILGIIGGTGSGKSSLVQLLLGLYPVDKGNIDLYQNGRSPLNLEQWRSWIAYVPQKVELFK
************************************************************
TIGR4 GTIRSNLTLGFNQEVSDQELWQALEIAQAKDFVSEKEGLLDALVEAGGRNFSGGQKQRLS
D39 GTIRSNLTLGFNQEVSDQELWQALEIAQAKDFVSEKEGLLDALVEAGGRNFSGGQKQRLS
D39V GTIRSNLTLGFNQEVSDQELWQALEIAQAKDFVSEKEGLLDALVEAGGRNFSGGQKQRLS
Hungary19A-6 GTIRSNLTLGLNQEVTDQELWQALEIAQAKDFVSDKEGLLDALVEAGGRNFSGGQKQRLS
EF3030 GTIRSNLTLGLNQEVTDQELWQALEIAQAKDFVSDKEGLLDALVEAGGRNFSGGQKQRLS
**********:****:******************:*************************
TIGR4 IARAVLRQAPFLILDDATSALDTITESKLLKAIRENFPNTSLILISQRTSTLQMADQILL
D39 IARAVLRQAPFLILDDATSALDTITESKLLKAIRENFPNTSLILISQRTSTLQMADQILL
D39V IARAVLRQAPFLILDDATSALDTITESKLLKAIRENFPNTSLILISQRTSTLQMADQILL
Hungary19A-6 IARAVLRQAPFLILDDATSALDTITESKLLKAIRENFPNTSLILISQRTSTLQMADQILL
EF3030 IARAVLRQAPFLILDDATSALDTITESKLLKAIRENFPNMSLILISQRTSTLQMADQILL
*************************************** ********************
TIGR4 LEKGELLAVGKHDDLMKSSQVYCEINASQHGKED
D39 LEKGELLAVGKHDDLMKSSQVYCEINASQHGKED
D39V LEKGELLAVGKHDDLMKSSQVYCEINASQHGKED
Hungary19A-6 LEKGELLAVGKHDDLMKSSQVYREINASQHGKED
EF3030 LEKGELLAVGKHDDLMKSSQVYREINASQHGKED
********************** ***********