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PangenomeTIGR4
serotype 4
D39serotype 2
D39Vserotype 2
Hungary19A-6serotype 19A
EF3030serotype 19F
670-6Bserotype 6B
6A-10serotype 6A
70585serotype 5
A026serotype 19F
A66serotype 3
AP200serotype 11A
ASP0581serotype 12F
ATCC 49619serotype 19F
ATCC 700669serotype 23F
BM6001serotype 19F
BVJ1JLserotype 1
CGSP14serotype 14
G54serotype 19F
HU-OHserotype 3
Hu15serotype 19A
Hu17serotype 19A
INV104serotype 1
INV200serotype 14
JJAserotype 14
MDRSPN001serotype 19F
NCTC7465serotype 1
NCTC7466serotype 2
NU83127serotype 4
OXC141serotype 3
P1031serotype 1
R6serotype 2
SP49serotype 19A
SPN032672serotype 1
SPN034156serotype 3
SPN034183serotype 3
SPN994038serotype 3
SPN994039serotype 3
SPNA45serotype 3
ST556serotype 19F
TCH8431/19Aserotype 19A
Taiwan19F-14serotype 19F
Xen35serotype 4
gamPNI0373serotype 1
⊟Summary[edit | edit source]
- pan ID?: PNEUPAN002682000
- symbol?: nagD
- synonym:
- description?: TIGR01457 family HAD-type hydrolase
- TIGR01457 family HAD-type hydrolase
- haloacid dehalogenase-like hydrolase
- HAD-superfamily subfamily IIA hydrolase
- Acid sugar phosphatase
- HAD family hydrolase
- haloacid dehalogenase
- hydrolase, haloacid dehalogenase-like family
- hydrolase, haloacid dehalogenase-like family protein
- COG0647: sugar phosphatases of the HAD superfamily%2C N-acetyl-glucosamine catabolism protein
- COG0647: sugar phosphatases of the HAD superfamily, N-acetyl-glucosamine catabolism protein
- HAD hydrolase, TIGR01457 family
- haloacid dehalogenase family hydrolase protein
- Hypothetical NagD-like phosphatase
- N-acetyl-glucosamine matabolism
- Predicted sugar phosphatases of the HAD superfamily
- Putative NagD-like phosphatase
- putative phosphatases involved in N-acetyl-glucosamine catabolism
- sugar phosphatases of the HAD superfamily, N-acetyl-glucosamine catabolism protein
descriptions from strain specific annotations:
- strand?: -
- coordinates?: 3541230..3542003
- occurrence?: in 100% of 43 strains
⊟Orthologs[edit | edit source]
⊟Genome Viewer[edit | edit source]
| TIGR4 | |
| D39 | |
| D39V | |
| Hungary19A-6 | |
| EF3030 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.505)
TIGR4 MKYKGYLIDLDGTIYKGKDRIPAGETFVHELQKRDIPYLFVTNNTTRTPESVKEMLAQNF
D39 MKYKGYLIDLDGTIYKGKDRIPAGETFVHELQKRDIPYLFVTNNTTRTPESVKEMLAQNF
D39V MKYKGYLIDLDGTIYKGKDRIPAGETFVHELQKRDIPYLFVTNNTTRTPESVKEMLAQNF
Hungary19A-6 MKYKGYLIDLDGTIYKGKDRIPAGETFVHELQKRDIPYLFVTNNTTRTPESVKEMLTQNF
EF3030 MKYKGYLIDLDGTIYKGKDRIPAGETFVHELQKRDIPYLFVTNNTTRTPESVKEMLAQNF
********************************************************:***
TIGR4 NIDTPLSTVYTATLATIDYMNDLGLEKTVYVVGEAGLKEAIKAAGYVEDKEKPAYVVVGL
D39 NIDTPLSTVYTATLATIDYMNDLGLEKTVYVVGEAGLKEAIKAAGYVEDKENPAYVVVGL
D39V NIDTPLSTVYTATLATIDYMNDLGLEKTVYVVGEAGLKEAIKAAGYVEDKENPAYVVVGL
Hungary19A-6 NIDTPLSTVYTATLATIDYMNDLGLEKTVYVVGEAGLKEAIKAAGYVEDKEKPAYVVVGL
EF3030 NIDTPLSTVYTATLATIDYMNDLGLEKTVYVVGEAGLKEAIKAAGYVEDKENPAYVVVGL
***************************************************:********
TIGR4 DWQVDYEKFATATLAIQKGAHFIGTNPDLNIPTERGLLPGAGSLITLLEVATRVKPVYIG
D39 DWQVDYEKFATATLAIQKGAHFIGTNPDLNIPTERGLLPGAGSLITLLEVATRVKPVYIG
D39V DWQVDYEKFATATLAIQKGAHFIGTNPDLNIPTERGLLPGAGSLITLLEVATRVKPVYIG
Hungary19A-6 DWQVDYEKFATATLAIQKGAHFIGTNPDLNIPTERGLLPGAGSLITLLEVATRVKPVYIG
EF3030 DWQVDYEKFATATLAIQKGAHFIGTNPDLNIPTERGLLPGAGSLITLLEVATRVKPVYIG
************************************************************
TIGR4 KPNAIIMDKAVEHLGLEREELIMVGDNYLTDIRAGIDNGIPTLLVTTGFTKAEEVAGLPI
D39 KPNAIIMDKAVEHLGLEREELIMVGDNYLTDIRAGIDNGIPTLLVTTGFTKAEEVAGLPI
D39V KPNAIIMDKAVEHLGLEREELIMVGDNYLTDIRAGIDNGIPTLLVTTGFTKAEEVAGLPI
Hungary19A-6 KPNAIIMDKAVEHLGLEREELIMVGDNYLTDIRAGIDNGIPTLLVTTGFTKAEEVAGLPI
EF3030 KPNAIIMDKAVEHLGLEREELIMVGDNYLTDIRAGIDNGIPTLLVTTGFTKAEEVAGLPI
************************************************************
TIGR4 APTHVVSSLAEWDFDEN
D39 APTHVVSSLAEWDFDEN
D39V APTHVVSSLAEWDFDEN
Hungary19A-6 APTHVVSSLAEWDFDEN
EF3030 APTHVVSSLAEWDFDEN
*****************