Jump to navigation
Jump to search
PangenomeTIGR4
serotype 4
D39serotype 2
D39Vserotype 2
Hungary19A-6serotype 19A
EF3030serotype 19F
670-6Bserotype 6B
6A-10serotype 6A
70585serotype 5
A026serotype 19F
A66serotype 3
AP200serotype 11A
ASP0581serotype 12F
ATCC 49619serotype 19F
ATCC 700669serotype 23F
BM6001serotype 19F
BVJ1JLserotype 1
CGSP14serotype 14
G54serotype 19F
HU-OHserotype 3
Hu15serotype 19A
Hu17serotype 19A
INV104serotype 1
INV200serotype 14
JJAserotype 14
MDRSPN001serotype 19F
NCTC7465serotype 1
NCTC7466serotype 2
NU83127serotype 4
OXC141serotype 3
P1031serotype 1
R6serotype 2
SP49serotype 19A
SPN032672serotype 1
SPN034156serotype 3
SPN034183serotype 3
SPN994038serotype 3
SPN994039serotype 3
SPNA45serotype 3
ST556serotype 19F
TCH8431/19Aserotype 19A
Taiwan19F-14serotype 19F
Xen35serotype 4
gamPNI0373serotype 1
⊟Summary[edit | edit source]
- pan ID?: PNEUPAN002701000
- symbol?: natA_5
- synonym:
- description?: ABC transporter ATP-binding protein
- ABC transporter ATP-binding protein
- ATP-binding cassette domain-containing protein
- ABC transporter ATP-binding protein - multidrug efflux
- ABC transporter, ATP-binding protein
- ABC transporter ATP-binding protein NatA
- multidrug ABC transporter ATPase
- putative ABC transporter ATP-binding protein (pseudogene)
- AAA family ATPase
- ABC transporter family protein
- ABC-type multidrug transport system, ATPase component
- Multidrug efflux ABC transporter ATP-binding protein
- Vitamin B12 import ATP-binding protein BtuD
- pseudogene
descriptions from strain specific annotations:
- strand?: -
- coordinates?: 3562017..3562545
- occurrence?: in 77% of 43 strains
⊟Orthologs[edit | edit source]
(3)
SPNA45:
—
(19F)
ST556:
—
(19F)
Taiwan19F-14:
—
⊟Genome Viewer[edit | edit source]
| TIGR4 | |
| D39 | |
| D39V | |
| Hungary19A-6 | |
| EF3030 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.505)
D39 MNVSKHYGHSIILKDINFALNKGEIVGLAGRNGVGKSTLMKILVQNNQPTSGNIISSDNV
D39V MNVSKHYGHSIILKDINFALNKGEIVGLAGRNGVGKSTLMKILVQNNQPTSGNIISSDNV
Hungary19A-6 MNVSKHYGYSIILKDINFALNKGEIVGLAGRNGVGKSTWMKILVQNNQPTSGNIISSDNV
********:***************************** *********************
D39 GYLIEEPKLFLSKTGLENLKYLSNLYGVDYNQEIFRSLIQELDLTQSINKKVKTYSLGTK
D39V GYLIEEPKLFLSKTGLENLKYLSNLYGVDYNQEIFRSLIQELDLTQSINKKVKTYSLGTK
Hungary19A-6 GYLIEEPKLFLSKTGLENLKYLSNLYGVDYNQERFRSLIQELDWTQSINKKVKTYSLGTK
********************************* ********* ****************
D39 QKLALLLTLVTEPDILILDEPTNGLDIESSQIVLSVLKNLALHENVGILISSHKLEDIEE
D39V QKLALLLTLVTEPDILILDEPTNGLDIESSQIVLSVLKNLALHENVGILISSHKLEDIEE
Hungary19A-6 QKLALLLTLVTEPDILILDEPTNGLDIESSQIVLSVLKNLALHENVGILISSHKLEDIEE
************************************************************
D39 ICERVLFLENGLLTFQKVGKDSHNFLFEIAFSSATDRDIFITKQEFGDIVQEEGLSITMS
D39V ICERVLFLENGLLTFQKVGKDSHNFLFEIAFSSATDRDIFITKQEFGDIVQEEGLSITMS
Hungary19A-6 ICERVLFLENGLLTFQKVGKDSHNFLFEIAFSSATDRDIFITKQEFGDIVQEEGLRITMS
******************************************************* ****
D39 GNIQSSELFKFFNENSIKVVDFETKKETLKDIYLNRSK
D39V GNIQSSELFKFFNENSIKVVDFETKKETLKDIYLNRSK
Hungary19A-6 GNIQSSELFKFFNENSIKVVDFETKKETLKDIYLNRSK
**************************************