Jump to navigation
Jump to search
PangenomeTIGR4
serotype 4
D39serotype 2
D39Vserotype 2
Hungary19A-6serotype 19A
EF3030serotype 19F
670-6Bserotype 6B
6A-10serotype 6A
70585serotype 5
A026serotype 19F
A66serotype 3
AP200serotype 11A
ASP0581serotype 12F
ATCC 49619serotype 19F
ATCC 700669serotype 23F
BM6001serotype 19F
BVJ1JLserotype 1
CGSP14serotype 14
G54serotype 19F
HU-OHserotype 3
Hu15serotype 19A
Hu17serotype 19A
INV104serotype 1
INV200serotype 14
JJAserotype 14
MDRSPN001serotype 19F
NCTC7465serotype 1
NCTC7466serotype 2
NU83127serotype 4
OXC141serotype 3
P1031serotype 1
R6serotype 2
SP49serotype 19A
SPN032672serotype 1
SPN034156serotype 3
SPN034183serotype 3
SPN994038serotype 3
SPN994039serotype 3
SPNA45serotype 3
ST556serotype 19F
TCH8431/19Aserotype 19A
Taiwan19F-14serotype 19F
Xen35serotype 4
gamPNI0373serotype 1
⊟Summary[edit | edit source]
- pan ID?: PNEUPAN002733000
- symbol?: neuA
- synonym:
- description?: SGNH/GDSL hydrolase family protein
- SGNH/GDSL hydrolase family protein
- GDSL-like Lipase/Acylhydrolase family protein
- 1-alkyl-2-acetylglycerophosphocholine esterase
- conserved hypothetical protein
- Lysophospholipase L1-like esterase
- conserved hypothetical protein, putative
- putative platelet activating factor
- Bifunctional N-acetylneuraminate cytidylyltransferase/platelet activating factor
- GDSL-like lipase/acylhydrolase, putative
- GDSL-like protein
- N-Acetylneuraminate cytidylyltransferase / Platelet activating factor
- N-acylneuraminate cytidylyltransferase
- platelet activating factor, putative
descriptions from strain specific annotations:
- strand?: -
- coordinates?: 3609232..3609867
- occurrence?: in 100% of 43 strains
⊟Orthologs[edit | edit source]
⊟Genome Viewer[edit | edit source]
| TIGR4 | |
| D39 | |
| D39V | |
| Hungary19A-6 | |
| EF3030 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.505)
TIGR4 MAVQLLENWLLKEQEKIQTKYRHLNHISVVEPNILFIGDSIVEYYPLQELFGTSKTIVNR
D39 MAVQLLENWLLKEQEKIQTKYRHLNHISVVEPNILFIGDSIVEYYPLQELFGTSKTIVNR
D39V MAVQLLENWLLKEQEKIQTKYRHLNHISVVEPNILFIGDSIVEYYPLQELFGTSKTIVNR
Hungary19A-6 MAVQLLENWLLKEQEKIQTKYRHLNHISVVEPNILFIGDSIVEYYPLQELFGTSKTIVNR
EF3030 MAVQLLENWLLKEQEKIQTKYRHLNHISVVEPNILFIGDSIVEYYPLQELFGTSKTIVNR
************************************************************
TIGR4 GIRGYQTGLLLENLDAHLYGGAVDKIFLLIGTNDIGKDVPVNEALNNLEAIIQSVARDYP
D39 GIRGYQTGLLLENLDAHLYGGAVDKIFLLIGTNDIGKDVPVNEALNNLEAIIQSVARDYP
D39V GIRGYQTGLLLENLDAHLYGGAVDKIFLLIGTNDIGKDVPVNEALNNLEAIIQSVARDYP
Hungary19A-6 GIRGYQTGLLLENLDAHLYGGAVDKIFLLIGTNDIGKDVPVNEALNNLEAIIQSVARDYP
EF3030 GIRGYQTGLLLENLDAHLYGGAVDKIFLLIGTNDIGKDVPVNEALNNLEAIIQSVARDYP
************************************************************
TIGR4 LTEIKLLSILPVNEREEYQQAVYIRSNEKIQNWNQAYQELASAYMQVEFVPVFDCLTDQA
D39 LTEIKLLSILPVNEREEYQQAVYIRSNEKIQNWNQAYQELASAYMQVEFVPVFDCLTDQA
D39V LTEIKLLSILPVNEREEYQQAVYIRSNEKIQNWNQAYQELASAYMQVEFVPVFDCLTDQA
Hungary19A-6 LTEIKLLSILPVNEGEEYQQAVYIRSNEKIQNWNQAYQELASAYMQVEFVPVFDCLTDQA
EF3030 LTEIKLLSILPVNEGEKYQQAVYIRSNEKIQNWNQAYQELASAYMQVEFVPVFDCLTDQA
************** *:*******************************************
TIGR4 GQLKKEYTTDGLHLSIAGYQALSKSLKDYLY
D39 GQLKKEYTTDGLHLSIAGYQALSKSLKDYLY
D39V GQLKKEYTTDGLHLSIAGYQALSKSLKDYLY
Hungary19A-6 GQLKKEYTTDGLHLSIAGYQALSKALKDYLY
EF3030 GQLKKEYTTDGLHLSIAGYQALSKALKDYLY
************************:******