Jump to navigation
Jump to search
PangenomeTIGR4
serotype 4
D39serotype 2
D39Vserotype 2
Hungary19A-6serotype 19A
EF3030serotype 19F
670-6Bserotype 6B
6A-10serotype 6A
70585serotype 5
A026serotype 19F
A66serotype 3
AP200serotype 11A
ASP0581serotype 12F
ATCC 49619serotype 19F
ATCC 700669serotype 23F
BM6001serotype 19F
BVJ1JLserotype 1
CGSP14serotype 14
G54serotype 19F
HU-OHserotype 3
Hu15serotype 19A
Hu17serotype 19A
INV104serotype 1
INV200serotype 14
JJAserotype 14
MDRSPN001serotype 19F
NCTC7465serotype 1
NCTC7466serotype 2
NU83127serotype 4
OXC141serotype 3
P1031serotype 1
R6serotype 2
SP49serotype 19A
SPN032672serotype 1
SPN034156serotype 3
SPN034183serotype 3
SPN994038serotype 3
SPN994039serotype 3
SPNA45serotype 3
ST556serotype 19F
TCH8431/19Aserotype 19A
Taiwan19F-14serotype 19F
Xen35serotype 4
gamPNI0373serotype 1
⊟Summary[edit | edit source]
- pan ID?: PNEUPAN002736000
- symbol?: capA
- synonym:
- description?: CapA family protein
- CapA family protein
- putative membrane protein (pseudogene)
- Capsule biosynthesis protein CapA
- enzyme of poly-gamma-glutamate biosynthesis
- bacterial capsule synthesis PGA_cap family protein
- CapA domain protein
- conserved domain protein
- poly-gamma-glutamate biosynthesis enzyme
- Putative enzyme of poly-gamma-glutamate biosynthesis (capsule formation)
- pseudogene
descriptions from strain specific annotations:
- strand?: -
- coordinates?: 3610718..3611518
- occurrence?: in 77% of 43 strains
⊟Orthologs[edit | edit source]
(3)
SPNA45:
—
(19F)
ST556:
—
(19F)
Taiwan19F-14:
—
⊟Genome Viewer[edit | edit source]
| TIGR4 | |
| D39 | |
| D39V | |
| Hungary19A-6 | |
| EF3030 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.505)
TIGR4 MGDFEGTINKDHYLAGYLLFNAPVEVMDAIKEAGYHVLDLAHNHILDSQIEGVISTADII
D39 MGDFEGTINKDHYLAGYLLFNAPVEVMDAIKEAGYHVLDLAHNHILDSQIEGVISTADII
D39V MGDFEGTINKDHYLAGYLLFNAPVEVMDAIKEAGYHVLDLAHNHILDSQIEGVISTADII
EF3030 MGDFEGTINKDHYLAGYLLFNAPAEVMDAIKEAGYHVLDLAHNHILDSQIEGVISTADII
***********************.************************************
TIGR4 EKAGITPIGVYTHEPRDQAPLVIKEVNGIKVALLAYSYGFNGIEQYISQEDYNRYLSDLN
D39 EKAGITPIGVYTHEPRDQAPLVIKEVNGIKVALLAYSYGFNGIEQYISQEDYNRYLSDLN
D39V EKAGITPIGVYTHEPRDQAPLVIKEVNGIKVALLAYSYGFNGIEQYISQEDYNRYLSDLN
EF3030 EKAGITPIGVYTHEPRDQAPLVIKEVNGIKVALLAYSYDFNGIEQYISKEDYNRYLSDLN
**************************************.*********:***********
TIGR4 EDKMKVEIERAEKEADITIIMLQMGVEYRLEPTEEQKALYHKMIDLGADIIFGGHPHVVE
D39 EDKMKVEIERAEKEADITIIMLQMGVEYRLEPTEEQKALYHKMIDLGADIIFGGHPHVVE
D39V EDKMKVEIERAEKEADITIIMLQMGVEYRLEPTEEQKALYHKMIDLGADIIFGGHPHVVE
EF3030 EDKMKAEIERAEKEADITIIMLQMGVEYRLEPTEEQKALYHKMIDWGADIIFGGHPHVVE
*****.*************************************** **************
TIGR4 PSETVEKDGDKKLIIY
D39 PSETVEKDGDKKLIIY
D39V PSETVEKDGDKKLIIY
EF3030 PSETVEKDGDKKLIVY
**************:*