pan ID^?: PNEUPAN002739000
symbol^?: def1
synonym: def
description^?: peptide deformylase
- peptide deformylase
- polypeptide deformylase
- N-formylmethionyl-tRNA deformylase
- Peptide deformylase, N-formylmethionylaminoacyl-tRNA deformylase
strand^?: +
coordinates^?: 3612334..3612945
occurrence^?: in 100% of 43 strains

⊟Orthologs[edit | edit source]

(4)^?

TIGR4:

SP_RS07155 (def)

(2)

D39:

SPD_RS06865 (def)

(2)

D39V:

SPV_RS06860 (def)

(19A)

Hungary19A-6:

SPH_RS07615 (def)

(19F)

EF3030:

EF3030_RS06825 (def)

(6B)^?

670-6B:

SP670_RS04160 (def)

(6A)

6A-10:

HKM25_RS06775 (def)

(5)

70585:

SP70585_RS07405 (def)

(19F)

A026:

T308_RS03815 (def)

(3)

A66:

A66_RS06460 (def)

(11A)

AP200:

SPAP_RS07305 (def)

(12F)

ASP0581:

EL334_RS07440 (def)

(19F)

ATCC 49619:

EL263_RS07035 (def)

(23F)

ATCC 700669:

SPN23F_RS07170 (def)

(19F)

BM6001:

ODS73_RS07450 (def)

(1)

BVJ1JL:

JN057_RS07070 (def)

(14)

CGSP14:

SPCG_RS07465 (def)

(19F)

G54:

SPG_RS06900 (def)

(1)

gamPNI0373:

HMPREF1038_RS07050 (def)

(3)

HU-OH:

EL271_RS07150 (def)

(19A)

Hu15:

SPNHU15_RS07055 (def)

(19A)

Hu17:

SPNHU17_RS06980 (def)

(1)

INV104:

INV104_RS07105 (def)

(14)

INV200:

SPNINV200_RS06920 (def)

(14)

JJA:

SPJ_RS06720 (def)

(19F)

MDRSPN001:

MDRSPN_RS03410 (def)

(1)

NCTC7465:

AT689_RS06790 (def)

(2)

NCTC7466:

DQM66_RS06860 (def)

(4)

NU83127:

EL277_RS07230 (def)

(3)

OXC141:

SPNOXC_RS06890 (def)

(1)

P1031:

SPP_RS07265 (def)

(2)

R6:

SPR_RS06540 (def)

(19A)

SP49:

BMJ42_RS07485 (def)

(1)

SPN032672:

SPN032672_RS01990 (def)

(3)

SPN034156:

SPN034156_RS01960 (def)

(3)

SPN034183:

SPN034183_RS06910 (def)

(3)

SPN994038:

SPN994038_RS06815 (def)

(3)

SPN994039:

SPN994039_RS06815 (def)

(3)

SPNA45:

SPNA45_RS04320 (def)

(19F)

ST556:

MYY_RS04290 (def)

(19F)

Taiwan19F-14:

SPT_RS04075 (def)

(19A)

TCH8431/19A:

HMPREF0837_RS05240 (def)

(4)

Xen35:

CXP32_RS07245 (def)

⊟Genome Viewer[edit | edit source]

⊟Alignments[edit | edit source]

alignment of orthologues:
CLUSTAL format alignment by MAFFT L-INS-i (v7.505)

TIGR4           MSAIERITKAAHLIDMNDIIREGNPTLRAIAEEVTFPLSDQEIILGEKMMQFLKHSQDPV
D39             MSAIERITKAAHLIDMNDIIREGNPTLRTVAEEVTFPLSDQEIILGEKMMQFLKHSQDPV
D39V            MSAIERITKAAHLIDMNDIIREGNPTLRTVAEEVTFPLSDQEIILGEKMMQFLKHSQDPV
Hungary19A-6    MSAIERITKAAHLIDMNDIIREGNPTLRTVAEEVTFPLSDQEIILGEKMMQFLKHSQDPV
EF3030          MSAIERITKAAHLIDMNDIIREGNPTLRTVAEEVTFPLSDQEIILGEKMMQFLKHSQDPV
                ****************************::******************************

TIGR4           MAEKMGLRGGVGLAAPQLDISKRIIAVLVPNIVEEGETPQEAYDLEAIMYNPKIVSHSVQ
D39             MAEKMGLRGGVGLAAPQLDISKRIIAVLVPNIVEEGETPQEAYDLEAIMYNPKIVSHSVQ
D39V            MAEKMGLRGGVGLAAPQLDISKRIIAVLVPNIVEEGETPQEAYDLEAIMYNPKIVSHSVQ
Hungary19A-6    MAEKMGLRGGVGLAAPQLDISKRIIAVLVPNIVEEGETPQEAYDLEAIMYNPKIVSHSVQ
EF3030          MAEKMGLRGGVGLAAPQLDISKRIIAVLVPNIVEEGETPQEAYDLEAIMYNPKIVSHSVQ
                ************************************************************

TIGR4           DAALGEGEGCLSVDRNVPGYVVRHARVTVDYFDKDGEKHRIKLKGYNSIVVQHEIDHING
D39             DAALGEGEGCLSVDRNVPGYVVRHARVTVDYFDKDGEKHRIKLKGYNSIVVQHEIDHING
D39V            DAALGEGEGCLSVDRNVPGYVVRHARVTVDYFDKDGEKHRIKLKGYNSIVVQHEIDHING
Hungary19A-6    DAALGEGEGCLSVDRNVPGYVVRHARVTVDYFDKDGEKHRIKLKGYNSIVVQHEIDHING
EF3030          DAALGEGEGCLSVDRNVPGYVVRHARVTVDYFDKDGEKHRIKLKGYNSIVVQHEIDHING
                ************************************************************

TIGR4           IMFYDRINEKDPFAVKDGLLILE
D39             IMFYDRINEKDPFAVKDGLLILE
D39V            IMFYDRINEKDPFAVKDGLLILE
Hungary19A-6    IMFYDRINEKDPFAVKDGLLILE
EF3030          IMFYDRINEKDPFAVKDGLLILE
                ***********************

Navigation menu

Contents

⊟Summary[edit | edit source]

⊟Orthologs[edit | edit source]

⊟Genome Viewer[edit | edit source]

⊟Alignments[edit | edit source]

Search

Navigation menu

⊟Summary[edit | edit source]

⊟Orthologs[edit | edit source]

⊟Genome Viewer[edit | edit source]

⊟Alignments[edit | edit source]