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PangenomeTIGR4
serotype 4
D39serotype 2
D39Vserotype 2
Hungary19A-6serotype 19A
EF3030serotype 19F
670-6Bserotype 6B
6A-10serotype 6A
70585serotype 5
A026serotype 19F
A66serotype 3
AP200serotype 11A
ASP0581serotype 12F
ATCC 49619serotype 19F
ATCC 700669serotype 23F
BM6001serotype 19F
BVJ1JLserotype 1
CGSP14serotype 14
G54serotype 19F
HU-OHserotype 3
Hu15serotype 19A
Hu17serotype 19A
INV104serotype 1
INV200serotype 14
JJAserotype 14
MDRSPN001serotype 19F
NCTC7465serotype 1
NCTC7466serotype 2
NU83127serotype 4
OXC141serotype 3
P1031serotype 1
R6serotype 2
SP49serotype 19A
SPN032672serotype 1
SPN034156serotype 3
SPN034183serotype 3
SPN994038serotype 3
SPN994039serotype 3
SPNA45serotype 3
ST556serotype 19F
TCH8431/19Aserotype 19A
Taiwan19F-14serotype 19F
Xen35serotype 4
gamPNI0373serotype 1
⊟Summary[edit | edit source]
- pan ID?: PNEUPAN002750000
- symbol?: trhA
- synonym:
- description?: PAQR family membrane homeostasis protein TrhA
- PAQR family membrane homeostasis protein TrhA
- haemolysin-III related membrane protein
- hemolysin
- hemolysin-3 (Hemolysin III) (Hly-III)
- hemolysin III
- hlyIII superfamily protein
- hemolysin III family protein
- channel, hemolysin III family protein
- channel protein, hemolysin III family
- Conserved hypothetical protein
- hemolysin-3
- predicted membrane protein
descriptions from strain specific annotations:
- strand?: +
- coordinates?: 3618692..3619339
- occurrence?: in 100% of 43 strains
⊟Orthologs[edit | edit source]
(12F)
ASP0581:
EL334_RS07490 (trhA)
(19F)
ATCC 49619:
EL263_RS07085 (trhA)
(23F)
ATCC 700669:
SPN23F_RS07220 (trhA)
(19A)
SP49:
BMJ42_RS07535 (trhA)
(1)
SPN032672:
SPN032672_RS02040 (trhA)
(3)
SPN034156:
SPN034156_RS02010 (trhA)
(3)
SPN034183:
SPN034183_RS06960 (trhA)
(3)
SPN994038:
SPN994038_RS06865 (trhA)
(3)
SPN994039:
SPN994039_RS06865 (trhA)
⊟Genome Viewer[edit | edit source]
| TIGR4 | |
| D39 | |
| D39V | |
| Hungary19A-6 | |
| EF3030 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.505)
TIGR4 MNTSLKLSKQLSFGEEIANSVTHAVGAVIMLILLPISSIYSYEAHGFLSSIGVSIFVISL
D39 MNTSLKLSKQLSFGEEIANSVTHAVGAVIMLILLPISSIYSYEAHGFLSSIGVSIFVISL
D39V MNTSLKLSKQLSFGEEIANSVTHAVGAVIMLILLPISSIYSYEAHGFLSSIGVSIFVISL
Hungary19A-6 MNTSLKLSKQLSFGEEIANSVTHAVGAVIMLILLPISSIYSYEAHGFLSSIGVSIFVISL
EF3030 MNTSLKLSKQLSFGEEIANSVTHAVGAVIMLILLPISSIYSYEAHGFLSSIGVSIFVISL
************************************************************
TIGR4 FLMFLSSTIYHSMAYGSTHKYVLRIIDHSMIYVAIAGSYTPVVLTLMNNWFGYLIIVIQW
D39 FLMFLSSTIYHSMAYGSTHKYVLRIIDHSMIYVAIAGSYTPVVLTLMNNWFGYLIIVIQW
D39V FLMFLSSTIYHSMAYGSTHKYVLRIIDHSMIYVAIAGSYTPVVLTLMNNWFGYLIIVIQW
Hungary19A-6 FLMFLSSTIYHSMAYGSTHKYVLRIIDHSMIYVAIAGSYTPVVLTLMNNWFGYLIIVIQW
EF3030 FLMFLSSTIYHSMAYGSTHKYVLRIIDHSMIYVAIAGSYTPVVLTLMNNWFGYLIIVIQW
************************************************************
TIGR4 GTTIFGILYKIFAKKVNEKFSLALYLIMGWLVLAIIPAIISQTTPVFWSLMVTGGLCYTV
D39 GTTIFGILYKIFAKKVNEKFSLALYLIMGWLVLAIIPAIISQTTPVFWSLMVTGGLCYTV
D39V GTTIFGILYKIFAKKVNEKFSLALYLIMGWLVLAIIPAIISQTTPVFWSLMVTGGLCYTV
Hungary19A-6 GTTIFGILYKIFAKKVNEKFSLALYLIMGWLVLAIIPAIISQTTPVFWSLMVTGGLCYTV
EF3030 GTTIFGILYKIFAKKVNEKFSLALYLIMGWLVLAIIPAIINQTTPVFWSLMVTGGLCYTV
****************************************.*******************
TIGR4 GAGFYAKKKPYFHMIWHLFILAASALQYIAIVYYM
D39 GAGFYAKKKPYFHMIWHLFILAASALQYIAIVYYM
D39V GAGFYAKKKPYFHMIWHLFILAASALQYIAIVYYM
Hungary19A-6 GAGFYAKKKPYFHMIWHLFILAASALQYIAIVYYM
EF3030 GAGFYAKKKPYFHMIWHLFILAASVLQYIAIIYYM
************************.******:***