PangenomeTIGR4

serotype 4

D39

serotype 2

D39V

serotype 2

Hungary19A-6

serotype 19A

EF3030

serotype 19F

670-6B

serotype 6B

6A-10

serotype 6A

70585

serotype 5

A026

serotype 19F

A66

serotype 3

AP200

serotype 11A

ASP0581

serotype 12F

ATCC 49619

serotype 19F

ATCC 700669

serotype 23F

BM6001

serotype 19F

BVJ1JL

serotype 1

CGSP14

serotype 14

G54

serotype 19F

HU-OH

serotype 3

Hu15

serotype 19A

Hu17

serotype 19A

INV104

serotype 1

INV200

serotype 14

JJA

serotype 14

MDRSPN001

serotype 19F

NCTC7465

serotype 1

NCTC7466

serotype 2

NU83127

serotype 4

OXC141

serotype 3

P1031

serotype 1

R6

serotype 2

SP49

serotype 19A

SPN032672

serotype 1

SPN034156

serotype 3

SPN034183

serotype 3

SPN994038

serotype 3

SPN994039

serotype 3

SPNA45

serotype 3

ST556

serotype 19F

TCH8431/19A

serotype 19A

Taiwan19F-14

serotype 19F

Xen35

serotype 4

gamPNI0373

serotype 1

⊟Summary

• pan ID^?: PNEUPAN002760000
• symbol^?: glyQ
• synonym:
• description^?: glycine--tRNA ligase subunit alpha

  descriptions from strain specific annotations:

  • glycine--tRNA ligase subunit alpha
  • Glycyl-tRNA synthetase alpha chain
  • glycyl-tRNA synthetase, alpha subunit
  • glycine--tRNA ligase alpha subunit
  • glycyl-tRNA synthetase alpha subunit
  • glycine--tRNA ligase, alpha subunit
  • glycyl-tRNA ligase
  • glycyl-tRNA synthase subunit alpha
  • glycyl-tRNA synthetase alpha chain (Glycine--tRNA ligasealpha chain) (GlyRS)
  • glycyl-tRNA synthetase subunit alpha
• strand^?: -
• coordinates^?: 3632358..3633275
• occurrence^?: in 100% of 43 strains

⊟Orthologs

(4)^?
TIGR4:
SP_RS07250 (glyQ)
(2)
D39:
SPD_RS06960 (glyQ)
(2)
D39V:
SPV_RS06955 (glyQ)
(19A)
Hungary19A-6:
SPH_RS07710 (glyQ)
(19F)
EF3030:
EF3030_RS06940 (glyQ)
(6B)^?
670-6B:
SP670_RS04065 (glyQ)
(6A)
6A-10:
HKM25_RS06870 (glyQ)
(5)
70585:
SP70585_RS07500 (glyQ)
(19F)
A026:
T308_RS03720 (glyQ)
(3)
A66:
A66_RS06555 (glyQ)
(11A)
AP200:
SPAP_RS07400 (glyQ)
(12F)
ASP0581:
EL334_RS07540 (glyQ)
(19F)
ATCC 49619:
EL263_RS07130 (glyQ)
(23F)
ATCC 700669:
SPN23F_RS07265 (glyQ)
(19F)
BM6001:
ODS73_RS07545 (glyQ)
(1)
BVJ1JL:
JN057_RS07165 (glyQ)
(14)
CGSP14:
SPCG_RS07575 (glyQ)
(19F)
G54:
SPG_RS06995 (glyQ)
(1)
gamPNI0373:
HMPREF1038_RS07145 (glyQ)
(3)
HU-OH:
EL271_RS07250 (glyQ)
(19A)
Hu15:
SPNHU15_RS07150 (glyQ)
(19A)
Hu17:
SPNHU17_RS07075 (glyQ)
(1)
INV104:
INV104_RS07210 (glyQ)
(14)
INV200:
SPNINV200_RS07030 (glyQ)
(14)
JJA:
SPJ_RS06815 (glyQ)
(19F)
MDRSPN001:
MDRSPN_RS03315 (glyQ)
(1)
NCTC7465:
AT689_RS06695 (glyQ)
(2)
NCTC7466:
DQM66_RS06955 (glyQ)
(4)
NU83127:
EL277_RS07330 (glyQ)
(3)
OXC141:
SPNOXC_RS06985 (glyQ)
(1)
P1031:
SPP_RS07360 (glyQ)
(2)
R6:
SPR_RS06635 (glyQ)
(19A)
SP49:
BMJ42_RS07580 (glyQ)
(1)
SPN032672:
SPN032672_RS02095 (glyQ)
(3)
SPN034156:
SPN034156_RS02055 (glyQ)
(3)
SPN034183:
SPN034183_RS07005 (glyQ)
(3)
SPN994038:
SPN994038_RS06910 (glyQ)
(3)
SPN994039:
SPN994039_RS06910 (glyQ)
(3)
SPNA45:
SPNA45_RS04225 (glyQ)
(19F)
ST556:
MYY_RS04195 (glyQ)
(19F)
Taiwan19F-14:
SPT_RS03980 (glyQ)
(19A)
TCH8431/19A:
HMPREF0837_RS05145 (glyQ)
(4)
Xen35:
CXP32_RS07345 (glyQ)

⊟Genome Viewer

TIGR4
D39
D39V
Hungary19A-6
EF3030

⊟Alignments

• alignment of orthologues:
  CLUSTAL format alignment by MAFFT L-INS-i (v7.505)
  
  
  TIGR4           MSKKLTFQEIILTLQQFWNDQDCMLMQAYDNEKGAGTMSPYTFLRAIGPEPWNAAYVEPS
  D39             MSKKLTFQEIILTLQQFWNDQGCMLMQAYDNEKGAGTMSPYTFLRAIGPEPWNAAYVEPS
  D39V            MSKKLTFQEIILTLQQFWNDQGCMLMQAYDNEKGAGTMSPYTFLRAIGPEPWNAAYVEPS
  Hungary19A-6    MSKKLTFQEIILTLQRFWNDQGCMLMQAYDNEKGAGTMSPYTFLRAIGPEPWNAAYVEPS
  EF3030          MSKKLTFQEIILTLQQFWNDQGCMLMQAYDNEKGAGTMSPYTFLRAIGPEPWNAAYVEPS
                  ***************:*****.**************************************
  
  TIGR4           RRPADGRYGENPNRLYQHHQFQVVMKPSPSNIQELYLESLEKLGINPLEHDIRFVEDNWE
  D39             RRPADGRYGENPNRLYQHHQFQVVMKPSPSNIQELYLESLEKLGINPLEHDIRFVEDNWE
  D39V            RRPADGRYGENPNRLYQHHQFQVVMKPSPSNIQELYLESLEKLGINPLEHDIRFVEDNWE
  Hungary19A-6    RRPADGRYGENPNRLYQHHQFQVVMKPSPSNIQELYLESLEKLGINPLEHDIRFVEDNWE
  EF3030          RRPADGRYGENPNRLYQHHQFQVVMKPSPSNIQELYLESLEKLGINPLEHDIRFVEDNWE
                  ************************************************************
  
  TIGR4           NPSTGSAGLGWEVWLDGMEITQFTYFQQVGGLATGPVTAEVTYGLERLASYIQEVDSVYD
  D39             NPSTGSAGLGWEVWLDGMEITQFTYFQQVGGLATGPVTAEVTYGLERLASYIQEVDSIYD
  D39V            NPSTGSAGLGWEVWLDGMEITQFTYFQQVGGLATGPVTAEVTYGLERLASYIQEVDSIYD
  Hungary19A-6    NPSTGSAGLGWEVWLDGMEITQFTYFQQVGGLATSPVTAEVTYGLERLASYIQEVDSVYD
  EF3030          NPSTGSAGLGWEVWLDGMEITQFTYFQQVGGLATGPVTAEVTYGLERLASYIQEVDSVYD
                  **********************************.**********************:**
  
  TIGR4           IEWADGVKYGEIFIQPEYEHSKYSFEISDQEMLLENFDKFEKEAGRALEEGLVHPAYDYV
  D39             IEWADGVKYGEIFIQPEYEHSKYSFEISDQEMLLENFDKFEKEAGRALEEGLVHPAYDYV
  D39V            IEWADGVKYGEIFIQPEYEHSKYSFEISDQEMLLENFDKFEKEAGRALEEGLVHPAYDYV
  Hungary19A-6    IEWADGVKYGEIFIQPEYEHSKYSFEISDQEMLLENFDKFEKEAGRALEEGLVHPAYDYV
  EF3030          IEWADGVKYGEIFIQPEYEHSKYSFEISDQEMLLENFDKFEKEAGRALEEGLVHPAYDYV
                  ************************************************************
  
  TIGR4           LKCSHTFNLLDARGAVSVTERAGYIARIRNLARVVAKTFVAERKRLGYPLLDEETRAKLL
  D39             LKCSHTFNLLDARGAVSVTERAGYIARIRNLARVVAKTFVAERKRLGYPLLDEETRVKLL
  D39V            LKCSHTFNLLDARGAVSVTERAGYIARIRNLARVVAKTFVAERKRLGYPLLDEETRVKLL
  Hungary19A-6    LKCSHTFNLLDARGAVSVTERAGYIARIRNLARVVAKTFVAERKRLGYPLLDEETRAKLL
  EF3030          LKCSHTFNLLDARGAVSVTERAGYIARIRNLARVVAKTFVAERKRLGYPLLDEETRVKLL
                  ********************************************************.***
  
  TIGR4           AEDAE
  D39             AEDAE
  D39V            AEDAE
  Hungary19A-6    AEDAE
  EF3030          AEDAE
                  *****