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PangenomeTIGR4
serotype 4
D39serotype 2
D39Vserotype 2
Hungary19A-6serotype 19A
EF3030serotype 19F
670-6Bserotype 6B
6A-10serotype 6A
70585serotype 5
A026serotype 19F
A66serotype 3
AP200serotype 11A
ASP0581serotype 12F
ATCC 49619serotype 19F
ATCC 700669serotype 23F
BM6001serotype 19F
BVJ1JLserotype 1
CGSP14serotype 14
G54serotype 19F
HU-OHserotype 3
Hu15serotype 19A
Hu17serotype 19A
INV104serotype 1
INV200serotype 14
JJAserotype 14
MDRSPN001serotype 19F
NCTC7465serotype 1
NCTC7466serotype 2
NU83127serotype 4
OXC141serotype 3
P1031serotype 1
R6serotype 2
SP49serotype 19A
SPN032672serotype 1
SPN034156serotype 3
SPN034183serotype 3
SPN994038serotype 3
SPN994039serotype 3
SPNA45serotype 3
ST556serotype 19F
TCH8431/19Aserotype 19A
Taiwan19F-14serotype 19F
Xen35serotype 4
gamPNI0373serotype 1
⊟Summary[edit | edit source]
- pan ID?: PNEUPAN002773000
- symbol?: inlJ
- synonym:
- description?: MucBP domain-containing protein
- MucBP domain-containing protein
- conserved hypothetical protein
- putative sortase-sorted surface anchored protein (pseudogene)
- Internalin-J
- Internalin-J precursor
- pseudogene
descriptions from strain specific annotations:
- strand?: -
- coordinates?: 3656233..3658222
- occurrence?: in 100% of 43 strains
⊟Orthologs[edit | edit source]
⊟Genome Viewer[edit | edit source]
| TIGR4 | |
| D39 | |
| D39V | |
| Hungary19A-6 | |
| EF3030 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.505)
TIGR4 MNIILIAKLLRENTNTKANALNNGWARSGSEEFKKFSHFVGVDKGIVRTNVLTGKKLSDK
D39 MNIILIAKLLRENTNTKANALNNGWARSGSEEFKKFSHFVGVDKGIVRTNVLTGKKLSDK
D39V MNIILIAKLLRENTNTKANALNNGWARSGSEEFKKFSHFVGVDKGIVRTNVLTGKKLSDK
Hungary19A-6 MNIILIAKPLRENTNTKANALNNGWARSGSEEFKKFSHFVGVDKGIVRTNVLTGKKLSDK
EF3030 MNIILIAKLLRENTNTKANALNNGWARSGSEEFKKFSHFVGVDKGIVRTNVLTGKKLSDK
******** ***************************************************
TIGR4 IRKEVGSGDSKLGKGGYFSTGDVLLGKDVVSYTVQVFSENNERVGVNTQSHRVQYNLPIL
D39 IRKEVGSGDSKLGKGGYFSTGDVLLGKDVVSYTVQVFSENNERVGVNTQSHRVQYNLPIL
D39V IRKEVGSGDSKLGKGGYFSTGDVLLGKDVVSYTVQVFSENNERVGVNTQSHRVQYNLPIL
Hungary19A-6 IRKEVDSGDSKLGKGGYFSTGDVLLGKDVVSYTVQVFSENNERVGVNTQSHRVQYNLPIL
EF3030 IRKEVGSGDSKLGKGGYFSTGDVLLGKDVVSYTVQVFSENNERVGVNTQSHRVQYNLPIL
*****.******************************************************
TIGR4 ADFSVIQDTVEPSRTVVEKIIPKLNIPEEEKGKITEEIKKKKKTSELAELISENVKVRYV
D39 ADFSVIQDTVEPSRTVVEKIIPKLNIPEEEKGKITEEIKKKKKTSELAELISENVKVRYV
D39V ADFSVIQDTVEPSRTVVEKIIPKLNIPEEEKGKITEEIKKKKKTSELAELISENVKVRYV
Hungary19A-6 ADFSVIQDIVEPSRTVVEKIIPKLNIPEEE---------KKKKTSELAELISENVKVCYV
EF3030 ADFSVIQDTVEPSRTVVEKIIPKLNIPEEEKGKITEEIKKKKKTSELAELISENVKVRYV
******** ********************* ****************** **
TIGR4 DEQGRLLSLKNDTGIGEKESDGTYITNKKQLIGTSYNVTDKKLSSMTTTDGKYYTFKEAD
D39 DEQGRLLSLKNDTGIGEKESDGTYITNKKQLIGTSYNVTDKKLSSMTTTDGKYYTFKEAD
D39V DEQGRLLSLKNDTGIGEKESDGTYITNKKQLIGTSYNVTDKKLSSMTTTDGKYYTFKEAD
Hungary19A-6 DEQGRLLSLKNDTGIGEKESDGTYITNKKQLIGTSYNVTDKKLSSMTTTDGKYYTFKEAD
EF3030 DEQGRLLSLKNDTGIGEKESDGTYITNKKQLIGTSYNVTDKKLSSMTTTDGKYYTFKEVD
**********************************************************.*
TIGR4 TNSASLTGNIVSEGRTVTLVYRESEAPTTATVTANYYKEGRQEKLVESVIKADLAIGSEY
D39 TNSASLTGNIVSEGRTVTLVYRESEAPTTATVTANYYKEGRQEKLVESVIKADLAIGSEY
D39V TNSASLTGNIVSEGRTVTLVYRESEAPTTATVTANYYKEGRQEKLVESVIKADLAIGSEY
Hungary19A-6 TNSASLTGNIVSEGRTVTLVYRESEAPTTATVTANYYKEGSQEKLAESVIKADLAIGSEY
EF3030 TNSASLTGNIVSEGRTVTLVYRESEAPTTVTVTANYYKEGSQEKLAESVIKADLAIGSEY
*****************************.********** ****.**************
TIGR4 TTESKTIEGKTTTEDKEDRVITRKTTYTLVATPENAYQKTVQQLTITTVRMLRKQWFPKQ
D39 TTESKTIEGKTTTEDKEDRVITRKTTYTLVATPANAYQKTVQQLTITTVRMLRKQWFPKQ
D39V TTESKTIEGKTTTEDKEDRVITRKTTYTLVATPANAYQKTVQQLTITTVRMLRKQWFPKQ
Hungary19A-6 TTESKTIEGKTTTEDKEDRVITRKTTYTLVATPANAYQKTVQQLTITTVRMLRKQWFPKQ
EF3030 TTESKTIEGKTTTEDKENRVITRKTTYTLVATPANAYQKTVQQLTITTVRMLRKQWFPKQ
*****************:*************** **************************
TIGR4 QPLLRRRL
D39 QPLLRRRL
D39V QPLLRRRL
Hungary19A-6 QPLLRRRL
EF3030 QPLLRRRL
********